similar to: Presenting results from multiple models in LaTeX table

Dear All, I am trying to graph a simple scatter plot where the x axis is year and the y axis is a percentage (percentage of infant death). Instead of plotting the raw data, I want to plot summary statistics such as mean and median. Here is the problem: the value range of y is between 0 and 1, but since infant death is a rare event, the mean and median is very low (something like 5%), which shows

Dear All, What is the preferred way to get Bayesian analysis results (such as those from MCMCpacki, MCMCglmm, and DPpackage) into LaTeX table automatically? I have been using the "apsrtable" package and similar functions in "memisc" package, but neither seems to handle MCMC output directly. Many thanks. Shige

This seemed to me to be basic, but I can't seem to find a solution online, so I wondered what I might be missing. I wish to include the output of an lm summary object inside an Sweave (.Rnw) document. I can either output the summary.lm as is, or use the xtable/Hmisc packages (through xtable or latex commands). Is there something like xtable that also gives the summary information which is

Dear All, Are there R packages that can estimate survival model with long-term survivors? This is sometimes known as "cure" model or "split-population" model. Thanks. Shige [[alternative HTML version deleted]]

I'm looking for an R method to produce latex versions of tables for table/array objects of 3 or more dimensions, which, of necessity is flattened to a 2D display, for example with ftable(), or vcd::structable, as shown below. I'd be happy to settle for a flexible solution for the 3D case. > UCB <- aperm(UCBAdmissions, c(2, 1, 3)) > ftable(UCB) Dept A B

Hi there, I have been using the example provided bellow for a while, and It was working without any problem. Nevertheless, just since 2-3 days is not working, probably because I did update.packages(). I have tried to re-install the older versions of the packages Hmisc() and xtable(), but still does not work. Can you run this example, and tell me if you got the same problems? I use

Hello everyone, Peter (see my earlier post) recommended the following script for finding the means and standard deviations and putting them in table form. However, I would like the standard deviations under the means in brackets. Can anyone check this code to see how this can be adjusted? library(xtable) dataset1 = matrix( c(1,2,3,4, 5, 6 ), 2 , 3) dataset2 = matrix( c(4,3,5,10, 1, 0), 2, 3)

Dear All, When I tried to run the following code (taken from the *spdplyr* package vignettes): library(spdplyr) library(maptools) data(wrld_simpl) worldcorner <- wrld_simpl %>% mutate(lon = coordinates(wrld_simpl)[,1], lat = coordinates(wrld_simpl)[,2]) %>% filter(lat < -20, lon > 60) %>% dplyr::select(NAME) I got the following error messages: Error in (function (cl,

Dear All, I am trying to compile&install the package "RGtk2" on my Ubuntu 10.04 box. I did not have problem with earlier versions, but with the new version, I got the following error message : ------------------------------------------------------------------------------------------------- * installing *source* package ?RGtk2? ... checking for pkg-config... /usr/bin/pkg-config

Dear All, I am trying to compile&install the package "RGtk2" on my Ubuntu 10.04 box. I did not have problem with earlier versions, but with the new version, I got the following error message : ------------------------------------------------------------------------------------------------- * installing *source* package ?RGtk2? ... checking for pkg-config... /usr/bin/pkg-config

Dear All, Can anyone give me some hints about how to set starting values for a lmer model? For complicated models like this, good starting values can help the numerical computation and make the model converge faster. Thanks! Shige [[alternative HTML version deleted]]

Dear Colleagues, In the following simple ggplot2 code: -------------------------------- m <- ggplot(d.fig, aes(time, prob)) m + stat_summary(fun.data = "median_hilow", conf.int = .95, geom = "smooth") + facet_wrap(~ Cohort, nrow=1) + coord_cartesian(ylim = c(0, .03)) -------------------------------- Is there a way to replace the y-axis label from "prob" to

Dear All, I have been using Sweave (mainly via the Sweave.sh script) and really like it. I am working a paper (using Sweave, of course) which includes several time-consuming computations, and it gets tedious to re-compile the whoel thing every time I made changes. Then I discover the "cacheSweave" package, which seems the right solution to my problem. I only have on problem. Here is

Hello, I am very happy that I have Sweave and R to write my papers. But I still have to do some tables by hand since I have not found out how I can customize the latex tables produced by R further (I mainly use xtable()). Like for instance, I have a table which needs an extra row every few rows as a group header and sometimes I want some extra horizontal lines in the table and also a multicolumn

Consider this situation: > x1 <- runif(100); x2 <- runif(100); y <- 2 + 3*x1 - 4*x2 + rnorm(100) > m1 <- summary(lm(y ~ x1)) > m2 <- summary(lm(y ~ x2)) > m3 <- summary(lm(y ~ x1 + x2)) Now you have estimated 3 different "competing" models, and suppose you want to present the set of models in one table. xtable(m1) is cool, but doing that thrice would give

hi there is there a way to convert objects of class ftable into LaTex code preserving the 'look' with row and column infomation? xtable() {xtable} can't handle such objects and latex() {Hmisc} just texify the number matrix, without row/column information regards soren

Hello all, I am new to xtable. I have several datasets in the form of matrices. Consider the following two simple datasets which are 2 x 3 matrices. The rows in both matrices have the same meaning. For example the first row of both matrices are variable 1 and the second row of both matrices are variable 2. dataset1 = matrix( c(1,2,3,4, 5, 6 ), 2 , 3) dataset2 = matrix( c(4,3,5,10, 1, 0), 2, 3)

Hola: El 15/07/13 09:41, José Luis Cañadas Reche escribió: > Hola. Yo suelo utilizar knitr, con sweave creo qeu había que utilizar > print(objeto xtable) > > De esta forma, utilizando xtable > > > library(xtable) > tabla.xtable <- xtable ( tutabla) > print(tabla.xtable) No es necesario utilizar print, con xtable(tutabla) basta. Las excepciones son cuando hay que

Hi, I am working on table suing R and Latex. I am writing .Rnw file first in which i m reading input file and storing into dataframe. After filtering certain values from this dataframe. I am planning to display it. I don't want to use xtable since i need to change column names. *Sample .Rnw file* @ <<echo=FALSE>>= cat("\begin{table}[ht]")

Hello everyone. I am new to R, so please bear with me. I am trying to find an easy way to export descriptive statistics and other information about my data frame to a LaTeX format. I have found the describe function in PrettyR to be very helpful in producing results in the exact format I'm looking for. However, the value of the describe function is a LIST (rather than a data frame) which I