Displaying 20 results from an estimated 1200 matches similar to: "Reading Genepop files"
2010 Sep 01
2
Rd-file error: non-ASCII input and no declared encoding
Dear list,
I came across the following error for three of my newly written Rd-files:
non-ASCII input and no declared encoding
I can't make sense of this.
Below I copied in one of the three files.
Can anybody please tell me what's wrong with it?
Thank you,
Christian
\name{tetragonula}
\alias{tetragonula}
\alias{tetragonula.coord}
\docType{data}
% \non_function{}
\title{Microsatellite
2010 Jan 26
0
problem with read.genepop function
I'm trying to use the package ARES to produce allelic richness
estimates with extrapolation beyond the sample size. I've begun by
testing the program with the butterfly_borneo data provided with the
package, but I seem to be having a problem with the read.genepop
function. Below, I've included my R code along with the error I
receive after trying to read the genepop file. I'm
2018 Apr 03
1
names lost in functions from packages installed by R-devel r74500
>>>>> Martin Maechler <maechler at stat.math.ethz.ch>
>>>>> on Tue, 3 Apr 2018 17:03:02 +0200 writes:
>>>>> Francois Rousset <francois.rousset at umontpellier.fr>
>>>>> on Tue, 3 Apr 2018 16:38:42 +0200 writes:
>> Dear list members,
>> If I install with R-devel r74500 on Windows (sessionInfo
2002 May 15
1
rsync not prompting for username, only password
Hi guys, can anyone suggest why, when I connect to my rsync server, I'm not
prompted for a username and password but instead I'm only prompted for a
password? I have "auth users = username" set in /etc/rsyncd.conf and a
corresponding entry in /etc/rsyncd.secrets but still rsync only asks for a
password.
Stewart
--
Stewart Mclean
UNIX Support Group
Information Management
2018 Apr 03
2
names lost in functions from packages installed by R-devel r74500
Dear list members,
If I install with R-devel r74500 on Windows (sessionInfo below) the
attached 'bugdemo' package with the single function
foo <- function() {
? named <- c("bar"=TRUE)
? print(named)
? return(named)
}
then run
> bugdemo::foo()
[1] TRUE
[1] TRUE
The "bar" name is lost. It is not lost when I define foo in the R
session instead of using
2002 May 15
1
strange password problem with rsync
Hi guys, I am experiencing a very strange problem with passwords and
username with rsync.
I have a "auth users" line in my /etc/rsyncd.conf file (see below) and a
corresponding username and password in my /etc/rsyncd.secrets. The strange
thing is is that authentication for the module listed in /etc/rsyncd.conf
(unixadm) only works IF the username in /etc/rsyncd.secrets is the same as
2002 May 22
2
rsyncing read-only files
Hi guys, I have a simple question regarding using rsync when one has
read-only files on the src machine. My situation is the following:
I have two machines, call then A and B. I'm using rsync on B to download
from A (I'm running rsync in daemon mode on A from inetd.conf). The rsyncing
on B works fine except for one problem: when I run rsync on B to do the
downloading from A, I get
2018 Apr 03
0
names lost in functions from packages installed by R-devel r74500
>>>>> Francois Rousset <francois.rousset at umontpellier.fr>
>>>>> on Tue, 3 Apr 2018 16:38:42 +0200 writes:
> Dear list members,
> If I install with R-devel r74500 on Windows (sessionInfo below) the
> attached 'bugdemo' package with the single function
> foo <- function() {
> ? named <-
2012 Oct 09
1
how to convert by lists in data.frames
Dear R-helpers,
I’ve got a summary of results from a by() call that I am making with a list
of more than two of factors not very different from the example in the by()
help page
require(stats)
by(warpbreaks[, 1], warpbreaks[, -1], summary)
The result of the command gives a list of the form
wool: A
tension: L
Min. 1st Qu. Median Mean 3rd Qu. Max.
25.00 26.00
2006 Jan 24
5
PXEboot large image creation
Hi,
I am trying to create an image that is larger than 1.44MB to be used
with PXE boot (Ghost 8 requires 2 floppys). My current attempts result
in the boot hanging at :
Loading boot sector... booting...
Starting...
My config just says the following:
default memdisk
append initrd=smalldos.img
I created the image following
http://syslinux.zytor.com/archives/2005-August/005573.html (I am unsure
2006 Mar 01
1
write.pop.file (genetics package)
Hello,
Can anybody tell me what the format of the input data file should be for
this R function?
Poor package documentation.
Thanks,
Matt
********************************************************
Matthew D. MacManes
PhD Student
UC- Berkeley
Department of Integrative Biology
Museum of Vertebrate Zoology
3101 VLSB #3140
Berkeley, CA 94720
(510)642-7782
EMAIL: macmanes@berkeley.edu
WEBSITE:
2005 Dec 14
3
glmmADMB: Generalized Linear Mixed Models using AD Model Builder
Dear R-users,
Half a year ago we put out the R package "glmmADMB" for fitting
overdispersed count data.
http://otter-rsch.com/admbre/examples/glmmadmb/glmmADMB.html
Several people who used this package have requested
additional features. We now have a new version ready.
The major new feature is that glmmADMB allows Bernoulli responses
with logistic and probit links. In addition there
2006 Feb 23
7
ipp2p don''t block Ares
HI
I have a bridge running ipp2p blocking Ares traffic and others protocols.
This bridge works fine buts since two weeks can''t block Ares traffic. All
protocols block fine but Ares not (upload and download).
Somebody are using ipp2p blocking the latest Ares version ?
My system settings are:
kernel : 2.6.13
iptables: 1.3.3
ipp2p: 0.81 rc1
iptables -L -v output:
Chain FORWARD
2005 Jun 22
3
block p2p: ARES
Hi....
I''m trying to setup a LAN router with P2P filter
but the problem is that can''t "catch" Ares.
There is a way to DROP "ares" p2p packets ?
I''ve tried with last "ipp2p" snapshot without sucess...
I''ve
Kernel 2.4.28
iptables 1.3.0
Various Patches from patch-o-matic-ng-20040621
iproute2-ss020116
IMQ Patch
Esfq Patch
2006 Jan 26
1
Automatic differentiation (was: Re: D(dnorm...)?)
Dear Alberto,
There are fisheries people also in Europe using AD Model Builder (Denmark and England for instance),
but you are probably right that it is more widespread in North America. There is also effort
going on where people try to make assessment models written in ADMB callable from R.
best regards,
hans
> think AD Model Builder is mainly used for fisheries assessment in North
2006 Feb 09
1
glmm.admb - bug and possible solution??
Dear Dr Skaug and R users,
just discovered glmm.admb in R, and it seems a very useful tool.
However, I ran into a problem when I compare two models:
m1<-glmm.admb(survival~light*species*damage, random=~1, group="table",
data=bm, family="binomial", link="logit")
m1.1<-glmm.admb(survival~(light+species+damage)^2, random=~1,
group="table", data=bm,
2005 Sep 22
5
p2p: ARES
Hi,
I''ve a linux as router nat + firewall
(POLICY DROP for INPUT OUTPUT and FORWARD)
but, I''ve put next rules for p2p software
on FORWARD chain
[... snip ... ]
iptables -F FORWARD
iptables -P FORWARD DROP
iptables -A FORWARD -p tcp --dport 80 -j ACCEPT
iptables -A FORWARD -p tcp --dport 25 -j ACCEPT
[... snip ... ]
iptables -A FORWARD -m ipp2p --ipp2p -j ACCEPT
iptables -A
2007 Jan 11
2
Voicemail IMAP
I know some of this doesn't belong on this list, but I am just
including it for problem history.
I am trying to setup IMAP Voicemail with our email server.
We are using a non-standards based groupware server called FirstClass.
The server has some built in support for IMAP.
My problem seems to be that the authuser flag is not supported.
When I use mtest in the imap toolkit to connect to
2005 Mar 23
1
Negative binomial GLMMs in R
Dear R-users,
A recent post (Feb 16) to R-help inquired about fitting
a glmm with a negative binomial distribution.
Professor Ripley responded that this was a difficult problem with the
simpler Poisson model already being a difficult case:
https://stat.ethz.ch/pipermail/r-help/2005-February/064708.html
Since we are developing software for fitting general nonlinear random
effects models we
2008 Mar 13
11
PCI Passthrough in
Is there any information available when one can expect OpenSolaris to
handle PCI Passthrough als Dom0?
This thread:
http://opensolaris.org/jive/thread.jspa?threadID=45875&tstart=135 makes
me think there might be some work going on...
Thanks
Ares