similar to: R CMD check sh: line 1: make: command not found

I'm trying to R CMD check a package, and I'm getting the 'checking S3 generic/method consistency' warning. I have written a function 'gamma.dist' which is _not_ an S3 method, but happens to collide with the 'gamma' function from the R::base namespace. Is there a way of telling CMD check that the name is intentional and is not meant to be an S3 method? My function

Hi the list, I build a package. They was a mistake in it, but R CMD check did not find it. Is that normal ? Here is what Kurt gets (which is right, I did this mistake): --- 8< ---------------- * checking for code/documentation mismatches ... WARNING S4 class codoc mismatches from documentation object 'LongData-class': Slots for class 'LongData' Code: id other time traj

Hi the list, I build a package. They was a mistake in it, but R CMD check did not find it. Is that normal ? Here is what Kurt gets (which is right, I did this mistake): --- 8< ---------------- * checking for code/documentation mismatches ... WARNING S4 class codoc mismatches from documentation object 'LongData-class': Slots for class 'LongData' Code: id other time traj

Hi, I'm trying to R CMD check a package, however I have hit a snag. There seems to be a problem with the creation of the /html files (the only file that's constructed here is the 00Index.html). I've tested each of the .Rd files independently with R CMD Rdconv, they all happily create html files without complaint. R CMD check <package> gives the no warnings. I'm therefore

This is a bug/misfeature report for R CMD check. The function tools:::.check_packages_used_in_tests Gives an apparently unintended error when checking the tests in the contributed package rcdd_1.1-3.tar.gz as found on CRAN. See the script below for details. The actual error reported is totally mysterious. * checking for unstated dependencies in tests ... NOTE Error in

The package.skeleton() base function is useful for creating empty packages. The fact that the help files generated by the function cause errors was long an annoyance, but I noticed last month (while preparing for a workshop on R and packages) that it creates packages which cause 'R CMD check ...' to die in error. Which is always a bug. I just verified that it still dies in error under

Hi, When running R CMD check I'm getting a number of errors that I don't quite follow and don't know where to start looking for an answer, any hints appreciated. R CMD check trunk * checking for working latex ... OK * using log directory '/Users/ivisser/Documents/projects/ depmixProject/depmixNew/rforge/depmix/trunk.Rcheck' * using R version 2.6.2 (2008-02-08) * checking

R gurus: I'm trying to get another round of rconifers out and I need some advice/help crushing differences in the examples test. I'm trying to make sure the max sdi values are being respected. I've added a tests/rconifers-Ex.Rout.save (from windows i386-pc-mingw32) and when I ran R CMD check (both R-2.13.0), I got the following results: * using log directory

All, I have a fresh build of R 2.8.0 from source on Windows XP using the latest Rtools binary (Rtools29.exe). All appears to be well with the install and make check-all exits cleanly. However, when running R CMD check mypkg the program jumps from checking for non-ASCII to checking the PDF version of the manual: * checking data for non-ASCII characters ... OK * checking PDF version of manual

Dear UseR, I get an error when I run "R CMD check" on my .tar.gz file package, and I don't understand why since I don't obtain any error with "R CMD check" on the package directory. Do you have any idea ? $ sudo ./R-2.11.0/bin/R CMD check eqtl_1.1.tar.gz and $ sudo ./R-2.11.0/bin/R CMD --check-subdirs=no eqtl_1.1.tar.gz return an Error * checking for working

Dear all: I ?m a newer. I have some problem when I check my package. The error messages were as follows. It shows that the problem is about Rd file. How can I find where the error is? How can I do?? c:\temp>Rcmd check bear * checking for working pdflatex ... OK * using log directory 'c:/temp/bear.Rcheck' * using R version 2.7.0 (2008-04-22) * using session charset: CP950 *

Hello, That is my first post here and I'd like to thanks everybody in advance. I am writing a package with some R functions and try to submit it to CRAN. After build and check the package a number of times, I am struggling with the fact that the CRAN people responsible for checking packages are replying me with some mistakes that I just do NOT get when I do the check in my computer. With the

Hi I am writing a package in which I define a new class in the .onLoad() hook: ,---- | .onLoad <- function(libname, pkgname) { | setClass( | "inDrak", | representation( | init = "SpatialGridDataFrame" | ), | contains = "simObj" | ) | } `---- The class "simObj" is defined in the package, which

I have received the following error for my package oro.nifti under "CRAN checks" for r-devel-linux-ix86; i.e., http://www.r-project.org/nosvn/R.check/r-devel-linux-ix86/oro.nifti-00check.html - using R version 2.12.0 Under development (unstable) (2010-06-12 r52259) - using platform: i686-pc-linux-gnu (32-bit) - using session charset: UTF-8 - checking for file

Dear list, I have been checking my package ('analogue') using R2.13-0-alpha (details of exact svn version appended below) and the R CMD check procedure is generating an error rebuilding a vignette in the package, which raises a NOTE in the check. The log printed to screen during check shows: .... * checking re-building of vignettes ... NOTE Error in re-building vignettes: ... Error in

Dear All, I am a beginner creating R packages. I followed the Leisch (2009) tutorial and the document ?Writing R Extensions? to write an example. I installed R 2.12.2 (I also tried R2.13.2), the last version of Rtools and the recommended packages in a PC with Windows 7 Home Premium. I can run R CMD INSTALL linmod in the command prompt and the R CMD check linmod. The following outputs are

Hi, While using R CMD check I get the following Latex error message which occurs when creating PDF version of manual: LaTex error: File `inconsolata.sty' not found I am using Windows 7 (64-bit) and R 3.0.1. I have MikTex 2.9. I see that the incosolata.sty is present under \doc\fonts folder. How can I eliminate this problem? Thanks, Ravi [[alternative HTML version deleted]]

Dear useRs, I am trying to build my package (nonpareff) which deals with some models of data envelopment analysis. The building worked well, but checking complains when it tests examples. Zipped nonparaeff.Rcheck is attached. Following is the log. --------------------------------------------- arecibo:tmp arecibo$ R CMD build nonparaeff/ * checking for file 'nonparaeff/DESCRIPTION' ...

Dear useRs, I am developing a package using RStudio and roxygen markup files. I have run into a problem while checking. The relevant function is a generic S3 statistical function modeled on t.test(), with methods. It returns an object of class "htest" etc. Here Is the (anonymized) relevant code: <...> #' @examples #' foo(c(5,4,6,5,7,9,8,11,12,10),

Dear everybody: Packages that DO pass the package check on my Ubuntu 17.04 laptop with R 3.4.1 and Mac OSX do not build on Centos 7 with R 3.4.1. I'm pretty sure I have an environment defect, but cannot find it. I find posts from various people about this problem since 2012. But I've checked the likely suspects. Among all the runs I pasted in below, the most informative error message I