similar to: Bug in R 2.4.1 ?

Hi R Developers, Greg is helping me with debugging R on Solaris 10 x64. Please let us know if you have any thoughts or tips that can help us debug this. Thanks, David ************ Using default transfer plist in vector_io: permuting About to write *** caught segfault *** address e8554000, cause 'memory not mapped' Traceback: 1: .External("do_hdf5save", call,

Hi there, I am currently working on something that uses hdf5 library. I think hdf5 is a great data format, I've used it somewhat extensively in python via PyTables. I was looking for something similar to that in R. The closest I can get is this library: hdf5. While it does not work the same way as PyTables did, but it's good enough to let them exchange data via hdf5 file. There is just 1

I've installed hdf5 [library & includes] here locally, last week. [see ?hdf5save in R] There is a remaining compilation / linking problem for me: The hdf5 library uses "compress2" a routine defined in Gnu's zlib, but not available in the zlib that comes with X11R6.3 (which we have installed). Now unfortunately, the final link statement for R (0.65) [for me, with hdf5

Summary: patch to add environment parameter to load() to allow -------- specification of destination environment. --> Patch against R 0.63.2 appended at end of this message. <-- Story: ------ I've been running some rather long MCMC chains, which occasionally crash, either due to an "Invalid tag in name extraction" error, or due to the machine going down. (I'm playing

--=-=-= Included below are: 1) Diffs to to remove HDF5 from R 2) Diffs to pass thru --with-* options to a module's configure script during "R INSTALL". (To reiterate a plea for this capability...) This applies only to Unix, the Windows (mingw32 in my case) build approach of passing in make variables like *-CFLAGS and *-LDFLAGS works fine. The only hitch

I'm an R newbie, so please forgive if this question has been asked and answered many times before on this mailing list. I can't find anything in the manual (Notes or R), the FAQ or on CRAN, so... Has anyone implemented an interface so R can read NCSA's HDF? -- Terry J. Westley, Principal Engineer Veridian Engineering, Calspan Operations P.O. Box 400, Buffalo, NY 14225 twestley at

HDF5 is a high quality data storage format from NCSA (http://hdf.ncsa.uiuc.edu/index.html) Marcus Daniels of the Swarm Development Group has made available an R library called hdf5 which allows loading and saving of data in hdf5 format. The source for his library is here: ftp://ftp.swarm.org/pub/swarm/src/testing/hdf5_1.4.7.tar.gz I prefer to use RPMs to maintain software across many linux

Hi Everyone, I have updated my R version from 2.7 to 2.8 (patch) and since then I can not open HDF5 files that I saved previously with the command hdf5save from the hdf5 library. As anyone had that problem yet? Any help would be appreciated. Thanks Emmanuel ------------------------------------------- Dr. Emmanuel Devred Bedford Institute of Oceanography, 1 Challenger Drive, Dartmouth, Nova

Hi, I've been playing with R for only a few days, so I'm not terribly familiar with it yet. Has anyone ever done any work using HDF or NetCDF files with R? Both file formats have libraries which can be linked to a program to read and write data to these formats. Is this sort of thing possible with R? We are planning to use the HDF format to store experimental data collected by some

Dear all, I'm trying to fix a subtle bug in the hdf5 package. This package provides an interfaces to the HDF5 library and hence allows one to load data into R from files in the HDF5 format. The bug appeared during a period in which R changed but the package did not. I include below both the R and C code, stripped of everything except what is needed to show the bug. What is supposed to