similar to: about hcluster

Hello sir: As to the 2*2 table format for reporting results comparing a new test to true diagnosis,when I got the sensitivity and specificity,how can I calculate the exact 95% confidence intervals (based on the binomial distribution) for sensitivity and specificity via R? Thanks a lot! My best! ------------------------------ ******************************************* Xin Meng Capitalbio

Hello sir: How can I perform McNemar (paired chi square test) by using R? Thanks! ------------------------------ ******************************************* Xin Meng Capitalbio Corporation National Engineering Research Center for Beijing Biochip Technology BioPharma-informatics & Software Dept. Research Engineer Tel: +86-10-80715888/80726868-6438 Fax: +86-10-80726790 Email??xmeng

Hi all: I wanna know how to expoort ".xls" file. And in the exported ".xls" file, how to set different cells with different color? Thanks a lot! My best. ------------------------------ ******************************************* Xin Meng Capitalbio Corporation National Engineering Research Center for Beijing Biochip Technology BioPharma-informatics & Software

Hello sir: There are 2 questions about string. 1 How to calculate the width of a string? e.g string "abc"'s width is 3; 2 How can I get the "substring" in such kind of condition: "f:\\JPCS_signal.txt" "f:\\PC1_signal.txt" "f:\\PC2_signal.txt" What I wanna get is "JPCS" "PC1" "PC2".How can I achieve them by R

Hello sir: How can I read data file of EXCEL format from disk("d:\\data.XLS" for example)? I can only read data file of .txt format read.delim("d:\\data.txt",header=T,as.is=T),but only EXCEL format is available at present. Thanks a lot

Hello sir: group1:1,2,3,4 group2:1,3,4,5 group3:2,4,8,9 .. ... group1000:9,3,8,2 I wanna get the "intersection set" and "union set". I've tried command "setdiff"and "union",but only two groups is permited.How can I deal with multi groups to find the "intersection set" and "union set"? Thanks a lot! My best

Hello sir: I use Rcmd to execute R code,such as : "C:\\Program Files\\R\\R-2.2.1\\bin\\Rcmd.exe" BATCH globalLowessRun.r globalLowessRun.r is a R function written by myself. But I wanna make the "globalLowessRun.r" changeable,such as globalLinearRun.r or gridbasedLowessRun.r,and so on. How can I achieve this goal via Rcmd.exe BATCH ? The only finding is: Rcmd BATCH

Hello sir: a data with 2 columns: id x a 1 b 2 c 3 I wanna get such kind of plot: x: a b c y:1 2 3 But the plot command doesn't permit string character as x. How can I get it ? Thanks a lot ! My best

hi all: If there's a dataframe: x y 1 a 2 b 3 c The info of the data such as : name date author The result I want is: name date author x y 1 a 2 b 3 c In other words,I wanna add the info above the dataframe. How can I do it ? Thanks a lot! My best

Thanks a lot for your timely rely. I still wonder whether I can use "a":"d" instead of 1:4. I remember I fulfill it successfully according to the guidance of some materials on R,but fail to find it now. Thanks again! ______________________________________________ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting

Hello sir: Here's the result of repeated measures ANOVA. $"Error: Within" Df Sum Sq Mean Sq F value Pr(>F) t 2 524177 262089 258.24 1.514e-06 *** Residuals 6 6089 1015 --- Signif. codes: 0 `***' 0.001 `**' 0.01 `*' 0.05 `.' 0.1 ` ' 1 My question is: How to extract the F value only? If the result is a

Hello sir: Here's a question: x<-1:5 y<-c(2,1,4) I wanna get the different elements between x & y,i.e. 3,5. How can I get the result(3,5) via R function? Thanks a lot for your help. My best! ------------------------------ ******************************************* Xin Meng Capitalbio Corporation National Engineering Research Center for Beijing Biochip Technology

Hello sir: Here's a question on covariance analysis which needs your help. There're 3 experiments,and x refers to control while y refers to experimental result. The purpose is to compare the "y" values across the 3 experiments. experiment_1: x:0.1 0.2 0.3 0.4 0.5 y:0.5 0.6 0.6 0.7 0.9 experiment_2: x:1 2 3 4 5 y:3 4 6.5 7.5 11 experiment_3: x:10 20 30 40 50 y:18 35 75 90

As to the function"pnorm",the default degree of freedom(df) is infinite. I wanna know how to set the df as I want. Help on pnorm doesn't have df setting.The only choice are:"mean, sd, lower.tail, log.p",but no df. For instance: sample size=6 df=6-1=5 t value=9.143 I wanna to the corresponding p value by using function "pnorm". How can I do it? Thanks a lot

Hello,sir: Here's a little question about R which needs your help.Thanks in advance. If I wanna make a sequence just like a,b,c,d (In other words,a vector consists of 4 characters :a,b,c,d ).How can I do it in a shortcut manner? Yes,I can do it as following: c("a","b","c","d") and the result is:[1] "a" "b" "c"

Full_Name: Doug Hershberger Version: 1.2.2 OS: Red Hat-Linux 7.0 Submission from: (NULL) (216.99.65.36) In the R FAQ I find the following entry explaining that R no longer has problems with memory. http://cran.r-project.org/doc/FAQ/R-FAQ.html#Why%20does%20R%20run%20out%20of%20of%20memory%3f However in my installation: R Version 1.2.2 (2001-02-26) Installed from the red hat RPM on your

Dear All, I wrote a function for cluster analysis to compute cophenetic correlations between dissimilarity matrices (using the VEGAN library) and cluster analyses of every possible clustering algorithm (SEE ATTACHED) http://old.nabble.com/file/p26288610/cor.coef.R cor.coef.R . As it is now, it is extremely long, and for the future I was hoping to find a more efficient way of doing this sort of

Hi, Suppose, if I create 15 files in my working directory. set.seed(48) lapply(1:15,function(i) {m1 <- matrix(sample(1:20,1686*2,replace=TRUE),nrow=1686,ncol=2); write.table(m1,paste0("file_",i,".txt"),row.names=FALSE,quote=FALSE)}) ?D <-dir() D1 <- D[order(as.numeric(gsub("\\D+","",D)))] D1 ?res <- t(sapply(D1,function(x) {x1<-

Hi, I want to know which distance is using in the function kmeans and if we can change this distance. Indeed, in the function pam, we can put a distance matrix in parameter (by the line "pam<-pam(dist(matrixdata),k=7)" ) but we can't do it in the function kmeans, we have to put the matrix of data directly ... Thanks in advance, Nicolas BOUGET

Dear Dario Sacco, >>>>> "DS" == Dario Sacco <dario.sacco at unito.it> >>>>> on Thu, 06 May 2010 17:45:30 +0200 writes: DS> Dear Dr. Maechler, DS> I am an agronomist and a researcher at the University of Turin. I am DS> also teaching "Applied statistics", then I have some knowledge in DS> Statistics, but not