similar to: Renaming Rplots.ps from BATCH scripts.

If the last line of an R script does not have a trailing newline, a small errror is produced at the end of the script. Small example. If file eg.r contains one line: getwd() and there is no newline after the closing paren $ R CMD BATCH eg.r produces an error: $ cat eg.r.Rout R : Copyright 2005, The R Foundation for Statistical Computing Version 2.1.1 Patched (2005-09-01), ISBN 3-900051-07-0

Dear All, Hello I'm a newbie to the list. I recently installed R on a Redhat 9.0 system, when I come to plot anything it does not bring up a graphics window but rather stores it in a file "Rplots.ps". I tried x11() but that doesn't bring up a window either. I would greatly appreciate any advice. Simon Woodhead

R version: 2.0.0 OS: Fedora Core 1 When I'm using Fedora Core 1, Rplots.ps (and subsequent Rplots.pdf created after using ps2pdf Rplots.ps) which are created from the command line execution of R are too large to fit on a US Letter sized page when printed. The same code will produce a US letter sized page when I'm on my Debian Sid box. Both boxes are connected to the same shared

Dear R People: I thought all was well with my source compilation on Windows until I tried "make check" Here is an abbreviated version of my results: C:\esr\R-2.5.0\src\gnuwin32>make check make check -------- Testing package base -------- Running examples in 'base-Ex.R' ... Comparing `base-Ex.Rout' to `base-Ex.Rout.prev' ...diff: extra operand

I have recently "printed" in R to a postscript file. I'm working on a SSH without an X terminal. It was fairly automatic: > plot(x,y) > dev.off() And then the default creates a file called Rplots.ps which I can ftp to my laptop and open in Ghostscript. I can see the file, and nothing looks odd. However, when I import it into LaTeX, it refuses to configure right side up.

R does a great job with the fine details regarding plots. e.g in the following: library(lattice) y <- -4:4/10 xyplot(y~1, las=1) the y axis is labelled with numbers -0.4, -0.2, 0.0, 0.2, 0.4 with the numbers aligned on the decimal point. How do I get the same behaviour in the colorkey of a levelplot? e.g. levelplot(matrix(y,3,3)) the numbers in the colorkey seem left-aligned, and

A recent paper on visualisation (in Neuron, a leading neuroscience journal) surveyed how well previous articles in this journal labelled their graphs (e.g. axis labelling and describing their error bars). Of particular interest is that (only) 40% of plots labelled what their colorkey was showing (variable and units). The paper is at http://dx.doi.org/10.1016/j.neuron.2012.05.001 R is not yet

Greetings, I'm trying to debug a simple two-line plot routine in R called test.R: cor(swiss) plot(swiss$Catholic, swiss$Examination) These commands work fine when typed into R. They also work fine when I invoke this routine by the following line into my terminal: R --slave < /Library/WebServer/Documents/gsa/test.R My ultimate goal is to send data to this R routine via a web

Hi I have recently installed and implemented Xvfb (X virtual frame buffer) so that I can create jpegs using R over CGI (SUSE Linux 8.1 and Apache 1.3). I have noticed that in order to do this, a file (Rplots.ps) is created in my cgi-bin directory everytime a cgi script is run. This could cause problems though as I have a multi-user system where it is possible that two different users will run

One of the examples in Rscript.Rd seems mis-formatted, in that the format statement is incomplete: ## Not run: Rscript -e 'date()' -e 'format(Sys.time(), " Both Rscript.Rd in R 2.5.0 and the version at: https://svn.r-project.org/R/trunk/src/library/utils/man/Rscript.Rd have Rscript -e 'date()' -e 'format(Sys.time(), "%a %b %d %X %Y")' Do

Buenas tardes: Hasta ahora he utilizado savePlot() en ejecuciones de R en Windows, donde lo que hago es grabar la ventana de gráficos mediante dev.cur() en formato pdf. Concretamente éste es el código: > savePlot(filename = ruta_pdf, type = "pdf", device = dev.cur(), restoreConsole = TRUE) Este comando está dentro de un bucle de "n" ejecuciones, por lo que guardo un pdf por

Dear all, In R<=1.6.2 I usually used the following code (in DOS prompt) to run R in batch mode C:\documents> Rcmd BATCH myfile.R and I could see the results (including warning messages) in the file myfile.Rout In R.1.7.0 I'm experiencing the followings: (1) even if I type "Rcmd BATCH myfile.R myfile.Rout", no file myfile.Rout is created, but just a "&1" file

Hello. In the file list.txt, I have the name of n files in data frame format. I want to make an image for each file and save the images in pdf format. To do this, I do the following: llista = scan(file="list.txt",what=list(nom="")) for (file.name in llista[[1]]){ aux=read.table(file=file.name) aux=as.matrix(aux) pdf() image(aux)

I'm completely new to R, and I'd like to do something like this: > x=c(1,2,3) > plot(x,x) At this point, R creates a file "Rplots.pdf", since the default device is PDF and the default filename is "Rplots.pdf". I know I can set the default device like this: > options(device="png") But is there a way to set the default device's

I recently wrote a vignette, with the following at the top of the .Rnw file: %%\VignetteIndexEntry{How to use look up tables for h() functions} %%\VignetteDepends{sjedmin, spatstat} Using vExplorer() on this function, I got an error from this part of getVigInfo(): lines <- grep("^%[[:space:]]*\\\\Vignette", file) if (length(lines) == 0) stop("File ", vig,

Suppose I create an R program called myTest.R with only one line like the following: type <- as.integer(readline("input type (1: type1; 2: type2)? ")) Then I'd like to run myTest.R in batch mode by constructing an input file called answers.R with the following: source("myTest.R") 1 When I ran the following at the terminal: R CMD BATCH answer.R output.Rout it failed

[Sending both to the maintainer and to R-help, in case anyone else has answers ...] I've looked in odfWeave documentation, vignette, and poked around on the web some, and haven't found answers yet. 1a. am I right in believing that odfWeave does not respect the 'keep.source' option? Am I missing something obvious? 1b. is there a way to set global options analogous to

I am using the Deepayan's Sweave trick to set graphics parameters for all graphs: ltheme = canonical.theme(color=TRUE) sup = trellis.par.get("superpose.line") ltheme$superpose.line$col = c('black',"red","blue","#e31111","green", "gray") .... Works perfectly, there is only a minor nuissance that trellis.par.get opens a device

Hi, I have researched batch mode for windows and could not find anything that worked. I know the code should be $ R CMD BATCH inputfile.R outputfile.Rout or R <inputfile.R > outputfile.Rout I tried these without success. I need detailed, step by step instructions on how to do this. I have tried typing C:\R\bin\x64\Rgui.exe before it, but this just opens R. When I tried to do this, it

The pdf man page contains the following text: pdf(file = ifelse(onefile, "Rplots.pdf", "Rplot%03d.pdf"), width = 6, height = 6, onefile = TRUE, family = "Helvetica", title = "R Graphics Output", fonts = NULL, version = "1.1", paper, encoding, bg, fg, pointsize) I am creating multi-page graphics in which each