similar to: questioin about cluster in R

Dear R-user, I am trying to use the function 'parLapply' from the 'snow' package which is supposed to work the same wys as 'lapply' but for a parallelized cluster of computers. The function I am trying to call in parallel is 'dudi.pca' (from the 'ade4' package) which performs principal component analyses. When I call this function on a list of

Hi Everyone, I'm trying to use cutree to get the clusters after hclust. What I used is: mycluster<-cutree(cnclust,h=0.5) Now, my problem is, how can I get the actual clusters? Thanks! Best, Baoqiang Cao

Hello all; I'm trying to execute parallel jobs trough library snow on a cluster built through torque/PSB. I'm succesfully obtaining the cluster with: >system("cat $PBS_NODEFILE > cluster.txt") >mycluster <- scan(file="cluster.txt",what="character") >cl <- makeSOCKcluster(mycluster) The only problem, at the moment, is that if I use

Hey guys, Ok, basically I coded a ruby on rails CMS to manage a bunch of media files. I am finding that a lot of people are "hot linking" to these media files and would like to prevent this to save bandwidth. Usually in the past, it hasn''t been a problem, I would add something like the following to my .htaccess file RewriteEngine on RewriteCond %{HTTP_REFERER} !^$

Hello! I created a distances matrix for 13 objects using daisy (see the attached file). I am trying to clusteranalyse it using agnes but it's not working. What might be the problem: mydistances<-read.csv("Results of daisy.csv") mycluster<-agnes(mydistances, method="ward") I am getting: Error in agnes(mydistances, method = "ward") : NA/NaN/Inf in foreign

I'm having difficulty finding a solution to my problem that without using a for loop. For the amount of data I (will) have, the for loop will probably be too slow. I tried searching around before posting and couldn't find anything, hopefully it's not embarrassingly easy. Consider the data.frame, Data, below Data Sub Tr IA FixInx FixTime p1 t1 1 1 200 p1 t1 2

Hi Everyone, I have a 2-dim data.matrix(e.g., table1) in which row1 specifies a range of values. row2 - rown specify the number of times I want to replicate each corresponding value in row1. I can do this with the following function: rep(c(table1[1,]),c(table1[X,])) #where X would go from 2 - n. Now, I can do this manually by changing the values of X and save each resulting array/vector in

It's not clear what you want but ... On 02/05/2023 10:57, Upananda Pani wrote: > Dear All, > > I have a dataset which contains date and 12 other countries data. I > have extracted the data as xts object. > > I am not able to recall all the series in the Y axis. My data set > looks like this > > index crepub finland france germany italy netherlands norway poland >

I guess this has a simple solution: I have matrix 'mat1' which has row and column names, e.g.: A B C row1 0 0 0 row2 0 0 0 .... rown 0 0 0 I have a another matrix 'mat2', essentially a subset of 'mat1' where the rownames are all in 'mat1' e.g.: B row3 5 row8 6 row54 7 I want to insert the values of matrix mat2 for column B (in reality it could be some or

I have never encountered anything like this before, so thought I'd post here and see if anyone can help. We have a java application that sends out notification emails to end-users. The body of the email is some boilerplate text and HTML that is pulled from a database. When the emails are received there are random instances of " !" (that's a space and a bang symbol) inserted

Hi everyone, I'm using the following code to go over every element of a data frame (row wise). The problem I am facing is that the outer 'x' variable is not incrementing itself, thus, only one row of values is obtained, and the program does not proceed to the next row. This is the code: while(x<=coln) { while(y<=rown) { n<-as.numeric(df[[y]][x]);

Our group has several web apps developed in ColdFusion, PHP, and Rails. The ColdFusion and PHP apps are on an older server, and the Rails apps on a new server. Ideally, we''d like them all to share the same server. Our current setup for the Rails server is Apache2.2 with mod_proxy_balancer and mongrel_cluster. We''d like to have specific directories be processed and served by

Dear r-helpers, plot(all.effects()) uses trellis for its output, and often produces several effect plots in a layout. Can anyone tell me how to set the arguments to plot.effect which default to row=1, col=1, nrow=1, ncol=1, more=FALSE so that I can plot multiple effect plots on one layout? I was hoping that a call like last <- rep(c(TRUE, FALSE), c(3, 1)) lay <-matrix(c(1:4,), 2, 2,

Hi, we're looking to reduce the number of host lists that need to be kept in sync in our system. (There are quite a few of them all over the place) OpenSSH CAs are an obvious solution for not having to keep all host keys in sync in /etc/ssh/known_hosts, however, while OpenSSH does support using a CA in conjunction with hostbased authentication, it still requires a list of all authorized

Full_Name: Peter Fischer Hallin Version: Version 1.8.1 OS: Irix64 Submission from: (NULL) (130.225.67.236) I've made a script look like this: exp <- read.table("graph/1933672048.cluster.data") exp <- as.matrix(exp) postscript("graph/1933672048.cluster.data.ps") heatmap(exp,scale="none",cexCol=0.4,cexRow=0.2,col=custom,margins=c(5,5)) The row labels

Dear all, I would like to draw a dendrogram and mark some parts/branches (by using "segments") including their labels. If I draw it without specifying the length of x axix, I am able to do that (as in My dendrogram 1 of the following codes). However, if I want to specify the x axix, I am not able to draw marking line (by using "segments") including labels (as in My dendrogram

Dear All, I have a dataset which contains date and 12 other countries data. I have extracted the data as xts object. I am not able to recall all the series in the Y axis. My data set looks like this index crepub finland france germany italy netherlands norway poland <date> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>

Dear all, I have a set od 30,000 binary landscapes, which represent habitat and non-habitat cover. I need to generate images that identify those neighbour (rule 8) pixels as one patch ID, and a different patch ID for each clump of pixels. I coded it using labcon(adehabitat), but as some of my landscapes have so many patches, labcon not finish and entry in a eternal looping. By other side, I coded

I have a Red Hat 9 Linux box running Samba version:2.2.7a-8.9.0-security-rollup-fix and Hylafax acting as a fax server. I print from my Windows XP machine to the Samba shared printer hoping the file name would be passed to Hylafax to use as the outbound phone number but Samba is submitting the job to Hylafax with a job name like: smbprn.000117.JrVPBv Hylafax can't process the job since

On Tue, Feb 24, 2015 at 2:20 PM, Darren Tucker <dtucker at zip.com.au> wrote: > On Wed, Feb 25, 2015 at 09:13:22AM +1100, Darren Tucker wrote: > > On Wed, Feb 25, 2015 at 09:04:57AM +1100, Darren Tucker wrote: > > > On Tue, Feb 24, 2015 at 12:11:16PM -0800, Kevin Brott wrote: > > > > ld: Unsatisfied symbol "xstrdup" in file > > > >