similar to: rbind

Hi, I have a matrix of data values like the example bellow. I would like to extract a subset of the matrix for the values where the first column is negative. I am using the subset function. However, I am getting an error message that the conditional variable doe snot exist. For some reason, the subset operation only works if I transform the matrix to a data set using as.data.set(). The help

Hi all, I am running R 2.0.1 under Windows XP in German. I configured my path as follows: C:\Programme\R\rw2001\bin;C:\Programme\xemacs-packages\lib-src\;C:\Programme\XEmacs-21.4.13\i586-pc-win32 I can not start R proccess or ESS from within XEmacs. What is going wrong? I can not start S. M-x S gives "no matching" How can I configure XEmacs for STATA 8? Thanks for your help. M

Dear list, This is a simple question but I spent an hour on it without success. So I sorry to bother you. I fit a linear model "lm" and then did "anova". My idea is to run multiple pairwise comparision for several factor variables (f1, f2, f3, f4 each with its own levels, say "0", "1", "3" etc )at the same time and get statistics for each

Hi list, I am fitting microarray data (intensity) model using the lme package in R environment. I have 5 fixed variables in the model. One of the fixed variables is genes. I am trying to get p-values for different genes. But I am getting only one p-value for all genes together. I can get a list of p-value when I run lm. Why can't this work in lme? I was wondering if some one can help me

Hi list, I am doing cluster analysis using the cluster package. I created a dendrogram using the function plot(agnes(myData)). When I try to change the sise of labels, it does not work. I tried cex = 1.5, etc. Nothing worked. Can anyone give me a hint on how to change the sise of the labels, as well as the sise of axes labels. Thanks Mahdi -- ----------------------------------- Mahdi Osman

Hi all, I am having memory allocation problem with my R 2.2.1 for Mac OS. The following is the error message that I get. I do not get this message if I break down the large dataset in to sub datasets. I think breaking up the dataset is not a sustainable solution in the long run. The data that I am analysing is essentially big, and it would be reasonable to do the analyis on the whole dataset

Dear all, I need your help as I was not able to find out the solution. The thing is- I am having a code which is reading file with this code- df=read.table("Case2.pileup",fill=T,sep="\t",colClasses="character") but as am making a tool so that user can use it and can do analysis on his file.But the name of the file will not be Case2.pileup and I want to use this

I want to create a number of vectors like : vec1 <- rnorm(1) vec2 <- rnorm(2) vec3 <- rnorm(3) and so on........... Here I tried following : for (i in 1:10) paste("vec", i, sep="") <- rnorm(i) However obviously that is not working. Here vectors I need to be seperated i.e I do not want to create a "list". How to modify above code? -- View this

Hallo all Please help me. I am lost and do not know what is the problem. I have a factor called kvartaly. > attributes(kvartaly) $levels [1] "1Q.04" "2Q.04" "3Q.04" "4Q.04" "1Q.05" "2Q.05" "3Q.05" "4Q.05" $class [1] "factor" > mode(kvartaly) [1] "numeric" > str(kvartaly) Factor w/ 8

Dear all, I am doing a project on variant calling using R.I am working on pileup file.There are 10 columns in my data frame and I want to count the number of A,C,G and T in each row for column 9.example of column 9 is given below- .a,g,, .t,t,, .,c,c, .,a,,, .,t,t,t .c,,g,^!. .g,ggg.^!, .$,,,,,.,

timo, here is an bizarre bug for you: i had (foolishly, it turns out) configured dovecot-auth to do ldap authentication binding with a prefect userdb (configs at end of message). everything worked fine, although with huge numbers of pop logins per second we started to see some pileup in the pop3-login processes as they were all waiting for ldap responses on the single ldap connection. the

Thomas B. Ruecker wrote: > Michael Grigoni wrote: > >>Greetings: >> >>It would be nice if Icecast supported RTSP; > > It probably never will > >>however I would >>appreciate any suggestions for a small RTSP/RTP solution to >>encode 8kHz mono audio in GSM or ADPCM and service multiple >>unicast client connections. > > why not use

Hi list, I am analysing a large dataset using random coefficient (using nlme) and fixed effects (using lm function) models. I have problem with my R version 2. 2. 1 due to memory allocation difficulties. When I try to expand the memory I get the following error message. > R --min-vsize=10000000 --max-vsize=1000000000 --min-nsize=500 --max-nsize=10000000 Error: target of assignment expands

Hi, list, I am using 'sgeostat' package by Albrecht Gebhardt and I am trying to put a correlation coefficient of some kind on the lagplots. Is there a possiblity to do so? Thanks Mahdi -- ----------------------------------- Mahdi Osman (PhD) E-mail: m_osm at gmx.net ----------------------------------- GMX im TV ... Die Gedanken sind frei ... Schon gesehen? Jetzt Spot online ansehen:

Dear list, I have been trying to resolve the following problem for a couple of hours, but couldn't get around. I updated my R pacages from CRAN which went somoothly. However, updating HTML is not going well. I got the following error message: 1: Package R2HTML is in use and will not be installed. 2: Number of rows of results is not a multiple of vector length (arg 1) in cbind (pkgs, lib).

Hi, list, I have got a dataset on soil and plant. I would like to fit a "glm" to my data. My response variable is percentage data. That is percent of plant root length colonized by Arbuscular micorrhiza fungi. Because of the nature of my data, I am not quite sure whether gamma or gaussian distribution is suitable for this type of data. If I use gamma distribution, which link function is

Hi, list, Sorry if I am bothering you. I am interested in using xgrid with R for distributed computing. I am using MacOS X and my R 2.1. 1 is already installed and running. The client computers are all of the same type and the same version of R has been installed on them. We have also set up xgrid on my system and client computers as well. I am wondering if any one can give me some clues

Hi list, I am fitting microarray data (intensity) model using the lme package in R environment. I have 5 fixed variables in the model. One of the fixed variables is genes. I am trying to get p-values for different genes. But I am getting only one p-value for all genes together. I can get a list of p-value when I run lm. Why can't this work in lme? My aim is to do multiple comaprison of all

Hi, dear list members, I've been using R under windows XP and I am now changing my system to SUSE LINUX 9.3. I could figure out that there is no precompiled version of R for LINUX. To get me going, I would like your help regarding what I need to setup R under my SUSE LINUX. Which compiler do I need to be able to compile the source and I was wondering if I could get GNU compiler?

When attempting to merge 3 data frames, one of which has fewer columns than the others, rbind.data.frame correctly refuses to perform the bind. However, the error message given is a bit obscure due to a logical bug in the match.names() internal function to rbind.data.frame. Illustration: ## Three data frames with same column variable names: > foo <- data.frame(v1 = c('a',