Displaying 20 results from an estimated 200 matches similar to: "Glimmix and glm"
2006 Feb 07
3
R- License
Hello. We are trying to install R on our network, and I wanted to ask if
there is a user license agreement. I will be grateful if somebody can send
me a link to it; if one exists.
Thank you very much
*******************************************
Antonio Paredes
USDA- Center for Veterinary Biologics
Biometrics Unit
510 South 17th Street, Suite 104
Ames, IA 50010
(515) 232-5785
[[alternative
2006 Apr 12
1
ARS
Hello everyone.
I would like to know if there is any R library to perform adaptive
rejection sampling.
Thanks in advance.
*******************************************
Antonio Paredes
USDA- Center for Veterinary Biologics
Biometrics Unit
510 South 17th Street, Suite 104
Ames, IA 50010
(515) 232-5785
[[alternative HTML version deleted]]
2006 Mar 24
1
Optim and likelihood computations
Hello everyone.
I want to write some likelihood functions to use with optim. For example
AR-structures, I have written a couple of functions that appear to get the
job done. But, since I am new to R, I wanted to ask if there are any
references in this topic.
Thanks in advance,
*******************************************
Antonio Paredes
USDA- Center for Veterinary Biologics
Biometrics Unit
2012 Nov 12
1
R lmer & SAS glimmix
Hi,
I am trying to fit a model with lmer in R and proc glimmix in SAS. I have
simplified my code but I am surprised to see I get different results from
the two softwares.
My R code is :
lmer(y~age_cat + (1|cat),data=fic,family=binomial(link = "logit"), NaGQ=1)
My SAS code is :
ods output Glimmix.Glimmix.ParameterEstimates=t_estimates;
proc glimmix data=tab_psi method=laplace;
2008 Jan 04
1
GLMMs fitted with lmer (R) & glimmix (SAS)
I'm fitting generalized linear mixed models to using several fixed effects (main effects and a couple of interactions) and a grouping factor (site) to explain the variation in a dichotomous response variable (family=binomial). I wanted to compare the output I obtained using PROC GLIMMIX in SAS with that obtained using lmer in R (version 2.6.1 in Windows). When using lmer I'm specifying
2018 May 24
1
USDA CVB recruiting statistician or data scientist
CENTER FOR VETERINARY BIOLOGICS
UNITED STATES DEPARTMENT OF AGRICULTURE
Join our team of statisticians and data scientists in 2018
We bring a broad perspective to our consulting and analytical work
with scientists at the USDA National Centers for Animal Health. Our
Statistics Section is looking for a good communicator who is
comfortable dealing with the analytical aspects of practical
2007 Sep 11
6
Editor for R under Fedora 7
Hello everyone,
I wanted to ask what will be a good editor to write R scripts in Fedora 7.
Tony
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2008 Aug 08
8
RPro
I recently came across a flyer from REvolution Computing, and I wanted to
ask if this is R going private?
Tony.
[[alternative HTML version deleted]]
2007 Dec 12
3
R and Excel Interface
Hello everyone,
I'll to request some input on what is available for use as an R/Excel
interface; any help will be appreciated.
Tony.
[[alternative HTML version deleted]]
2005 Dec 01
3
Strange Estimates from lmer and glmmPQL
I'm trying to fit a generalized mixed effects model to a data set where
each subject has paired categorical responses y (so I'm trying to use a
binomial logit link). There are about 183 observations and one
explanatory factor x. I'm trying to fit something like:
(lmer(y~x+(1|subject)))
I also tried fitting the same type of model using glmmPQL from MASS. In
both cases, I get a
2012 Jun 19
1
Pseudolikelihood Estimation of spatial GLMM using R
Dear R users,
I've been trying to find an R package which does the PL estimation of
spatial GLMMs especially with the negative binomial model. so it would be
something similar to the "proc GLIMMIX" with the PL method in SAS. I've
looked up some possible packages related to GLMMs, but it doesn't seem to be
anyone using the PL estimation.
Thanks for your help!
Fei He
UCR
2006 Aug 02
2
From 2.2.1 to 2.3
Hello everyone.
Currently I am running R 2.2.1 (windows), and I will like to update to
2.3. I wanted to ask if it is possible to update without having to removed
2.2.1; or do I first need to delete 2.2.1?
Thank you very much.
Tony
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2007 Aug 23
2
Exact Confidence Intervals for the Ration of Two Binomial
Hello everyone,
I will like to know if there is an R package to compute exact confidence
intervals for the ratio of two binomial proportions.
Tony.
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2008 Nov 07
1
AIC value in lmer
Dear R Users,
May be this message should be directy send to Douglas Bates ...
I just want to know if I can use the AIC value given in the output of an lmer model to classify my logistic models.
I heard that the AIC value given in GLIMMIX output (SAS) is false because it come from a calculation based on pseudo-likelyhood.
Is it the same for lmer ???
thanks,
Arnaud
Arnaud MOSNIER
Biologiste
2012 Feb 24
1
code for mixed model in R?
Dear
I am analysing my data wit a mixed model. I used SAS but I want to redo the
same analysis in R. Here the SAS code and what I wrote in R. It seems to
work but the results are not the same. I don't know how to specify the class
variable in R or specify the variance matrix. Can you please help me?
Thanks
Jurgen
## SAS:
proc glimmix data=trend method=RSPL;
class pid;
model mdrfinal
2008 Feb 14
1
Cholmod error `matrix not positive definite'
Dear R-users,
I'm new to R, so my apologies if this question doesn't make sense.
I've tried the following model in lmer, and it works perfectly:
model<-lmer(aphids~densroot+zone+(1|zone/site), family=quasipoisson)
But if I try the exact same model with a different variable, totmas, the model looks as follows:
model<-lmer(aphids~totmas+zone+(1|zone/site), family=quasipoisson)
2008 Feb 20
1
p-value for fixed effect in generalized linear mixed model
Dear R-users,
I am currently trying to switch from SAS to R, and am not very familiar with R yet, so forgive me if this question is irrelevant.
If I try to find the significance of the fixed factor "spikes" in a generalized linear mixed model, with "site" nested within "zone" as a random factor, I compare following two models with the anova function:
2009 Dec 08
0
R Programmer Vacancy - USDA Center for Veterinary Biologics
Statistical Programmer - USDA Center for Veterinary Biologics
The USDA Center for Veterinary Biologics is seeking a statistical
programmer with good R skills. The position is a two-year term position in
the CVB Statistics Section with the possibility of becoming permanent.
Applicants must be United States citizens.
The position calls for a thorough knowledge of R and aptitude in both
programming
2008 Nov 20
1
syntax and package for generalized linear mixed models
Hi All,
I am making the switch to R and uncertain which of the several packages for
mixed models is appropriate for my analysis. I am waiting for Pinheiro and
Bates' book to arrive via inter-library loan, but it will be a week or more
before it arrives.
I am trying to fit a generalized linear mixed model of survival data
(successes/trials) as a function of several categorical fixed and
2009 Dec 08
0
Job Opportunity
Statistical Programmer - USDA Center for Veterinary Biologics
The USDA Center for Veterinary Biologics is seeking a statistical
programmer with good R skills. The position is a two-year term position in
the CVB Statistics Section with the possibility of becoming permanent.
Applicants must be United States citizens.
The position calls for a thorough knowledge of R and aptitude in both
programming