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Dear All, I would like to ask clarifications on the gower distnce matrix calculated by the function gdistin the library mvpart. Here is a dummy example: > library(mvpart) Loading required package: survival Loading required package: splines mvpart package loaded: extends rpart to include multivariate and distance-based partitioning > x=matrix(1:6, byrow=T, ncol=2) > x [,1]

Dear R-listers, Here, I would like to hearing helps from you. I have GPS data (multiple points in the geographic scale) in longitude/latitude. I intend to calculate distance (in kilometer) among such points and output the distance matrix in dist class. I have gotten some progress, but I still can not get final goal. Could please give me any directions/advice? This email cc. to Mr. Pierre, the

Dear R community, I am analyzing plant communities with the function mvpart, using a dissimilarit matrix as input. The matrix is calculated with the funtion gdist. fit <- mvpart(gdist (ba12[,18:29], meth="maximum", full=TRUE, sq=F) ~ beers + slope_dem + elev_dem+ plc_dem + pr_curv+ +curv+max_depth+doc_rocks+ abandon+land_use+ca_old, data=ba12, xv="p") This

Estimado Wilmer Contreras Sepulveda Me parece buena la sugerencia de Jorge, hay muchas formas, yo aparte de la sugerencia que le hicieron le agrego otras dos, en cualquier buscador las palabras claves son R AUC, y el artículo https://www.r-bloggers.com/calculating-auc-the-area-under-a-roc-curve/ , lógicamente aparecerán tantas alternativas que puede llegar a confundirse respecto a cuál es

Hi all, I defined the following ############################# myhist=function(x){ hist(x,xlab="",main="") h=hist(x) xfit=seq(min(x),max(x),length=100) yfit=dnorm(xfit,mean(x),sd=sd(x)) yfit=yfit*diff(h$mids[1:2])*length(x) lines(xfit, yfit, col="blue", lwd=2) } ############################# individually, it worked fine however, if I used par(mfrow=c(2,2))

Hola, estoy trabajando con el paquete xlsx y el xlConnect y ambos presentan este mismo error. Error in .jcall(cell, "V", "setCellValue", value) : java.lang.OutOfMemoryError: Java heap space Alguien conoce una solución. Alguien conoce otro paquete para guardar documento de excel y que no involucre el uso de Java. -- *Wilmer Contreras Sepulveda* *Grupo de Investigación

Buenas noches. Quisiera saber si existe una libreria o función que me calcule el área bajo la curva de dos vectores de números. Ademas esta debe tener en cuenta si existen datos faltantes o NaN. Por ejemplo calcular el área bajo la curva del vector en el eje x: x<- c(1,2,3,4,5,6,7,8,9,10) y el vector en el eje y: y<-c(0,2,15,30,50,NaN,NaN,10,2,1) Muchas gracias. -- *Wilmer

I have an adjacency matrix and I want to obtain a matrix of the minimum paths between the nodes. Thank you Alessandro Ambrosini -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subject !)

Currently, I am doing it this way. x <- mtcars$mpg h<-hist(x, breaks=10, col="red", xlab="Miles Per Gallon", main="Histogram with Normal Curve") xfit<-seq(min(x),max(x),length=40) yfit<-dnorm(xfit,mean=mean(x),sd=sd(x)) yfit <- yfit*diff(h$mids[1:2])*length(x) lines(xfit, yfit, col="blue", lwd=2) But since, ggplot2 has more appealing

Hola, buenos días. Quisiera saber si existe alguna función o libreria en R que simule la ventana de Excel para ingresar datos. No estoy hablando de importar datos de excel a R, No. Quisiera que dentro de R existiera el entorno para ingresar los datos rapidamente y no pasar por la molestia de ingresar los datos a Excel y luego tener que importarlos a R. Muchas gracias. Wilmer Contreras

. I am looking for a histogram or box plot with the adding normal distribution curve I think that must be possible, but I am not able to find out how to do. Regards Knut

Dear all, I'm getting an error in one of the stock examples in the 'mvpart' package. I tried: require(mvpart) data(spider) fit3 <- rpart(gdist(spider[,1:12],meth="bray",full=TRUE,sq=TRUE)~water+twigs+reft+herbs+moss+sand,spider,method="dist") #directly from ?rpart summary(fit3) ...which returned the following: Error in apply(formatg(yval, digits - 3), 1,

I'm trying to extract the points above and below a particular lsfit. I can only get the residuals from the original fit though. x = runif(100, 0, 10) plot(x) abline(lsfit(1:100, test)) abline(lsfit(1:100, test + sd(test))) #I want the points above THIS line. Is there a way to use the coefficients from the fit to do this? Thanks for any help.

Dear lattice wizards, I am trying to figure out how to plot predicted values in xyplot, where the intercept, but not the slope, varies among conditioning factor levels. I am sure it involves the groups, but I have been unsuccessful in my search in Pinhiero and Bate, in the help files, or in the archive, or in my attempts on my own. My example follows: FACT is a factor with levels a,b,c

Hi, I am very new to R and I've been trying to work through the R book to gain a better idea of the code (which is also completely new to me). Initially I imputed my data from a text file and that seemed to work ok, but I'm trying to examine linear relationships between gdist and gair, gdist and gsub, m6dist and m6air, etc. This didn't work and I think it might have something to do

Hi, I want to get a histogram with the legend for my data. I drew a normal density curve and kernel density curve in the histogram, and I also label mean and median in the X axis. From the code, I got two legend: One shows "Normal Density" and "Kernel Density" and their corresponding lines, the other shows "Mean = value" and "Median = value" and their

Buen día para todos. Tengo un pequeño problema en el quisiera que me colaboraran. Estos días estoy trabajando en la lectura de una gran cantidad de archivos de extención .csv, se trata de una lista de documentos de 11 estaciones meteorologicas. Cada estación esta clasificada por meses y cada mes por dias, asi que tengo un archivo cada día. Por ejemplo tengo un archivo .csv para el día uno del

Dear R people: I would like to superimpose a normal curve on a histogram. I've seen this example in a book, somewhere. I know that you draw the hist, get the mean and sd of the data set, but then I'm stuck. Could you help, please? Thanks! Erin hodgess at uhddx01.dt.uh.edu -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

Hello I have 2 rows in a matrix and I want to calculate the Gower Distance between the 2 , how can I do it? I searched and found nothing that can help me, and my program doesn't know the gdist function and I couldn't find it on the R help site. Can anyone help me plz Thank u all [[alternative HTML version deleted]]

I'm having a problem reading data to set control totals for a dataframe. I want to adjust a dataframe based on a 2-d table of values, which I get by using : > CurrentX1Sums <- as.matrix(xtabs(~tripid_nu+lineon, data=SurveyData)) > CurrentX2Sums <- apply(CurrentX1Sums, 1, sum) I've created a .csv file with new (target) sums that looks like this: tripid_nu Warner