similar to: get plot in a window when running R in the shell

Dear useRs, I have a function that creates several global objects with assign("obj",obj,.GlobalEnv), and which I need to run iteratively in another function. The code is similar to f <- function(...) { assign("obj",obj,.GlobalEnv) } fct <- function(...) { for (i in 1:1000) { ... f(...) ...obj... rm(obj) #code fails without this line } } I don't understand

Dear useRs, I have a simple/RTFM question about XML parsing. Given an XML file, such as (fragment) <A>100</A> <B>23</B> <C>true</C> how do I import it in a data frame or list, so that the values (100, 23, true) can be accessed through the names A, B and C? I installed the XML package and looked over the documentation... however after 20 minutes and a couple of

Dear useRs, I have a data frame and I want to plot all rows. Each row is represented as a line that links the values in each column. The plot looks like this: dfr <- data.frame(A=sample(1:50,10),B=sample(1:50,10), C=sample(1:50,10),D=sample(1:50,10)) xa <- 10*1:4 plot(c(10,40),c(0,50)) for (i in 1:nrow(dfr)) { lines(xa,dfr[i,],pch=20,type="o") } Things get more complicated

Dear R users, I'm having a hard time with some very simple things. I have a time series where the dates are in the format 7-Oct-04. I imported the file with read.csv so the date column is a factor. The series is rather long and I want to plot it piece by piece. The function below works fine, except that the labels for date are meaningless (ie 9.47e+08 or 1098000000 - apparently the number of

Dear R users, I have a column with dates (character) in a data frame: 12-Jan-01 11-Jan-01 10-Jan-01 9-Jan-01 8-Jan-01 5-Jan-01 and I need to convert them to (Julian) dates so that I can sort the whole data frame by date. I thought it would be very simple, but after checking the documentation and the list I still don't have something that works. 1. as.Date returns the error below. What am I

Is there a cheat-sheet anywhere that describes how to do SQL-like manipulations on a data frame? My knowledge of R is rather limited. But from my experience it seems as though one can think of data frames as being similar to tables in a database: there are rows, columns, and values. Also, one can perform similar manipulations on a data frame as one can on a table. For example:

Classification: UNCLASSIFIED Caveats: NONE Thanks for your quick response. The program you mentioned below available from R is based on number of runs (up or down) not based on a longest length of runs of same events. To be more specific, for example, from a series, HHTHTTTTHHH, the number of runs are 5, and the longest length of runs of the same events is 4. I'll check for the website you

Dear R community, I tried to optimized my R code by using Rprof. In my R code I'm using MySQL database connections intensively. After a bunch of queries R fails with the following error message: Error in .Call("RS_MySQL_newConnection", drvId, con.params, groups, PACKAGE = .MySQLPkgName) : RS-DBI driver: (could not connect mylogin@mydatabase on dbname "myDB"

Hello, Please forget me if I am asking something that is well documented. I have read documentation but there are points that are not clear for me. I am not expert in R nor Databases, but if someone direct me to a tutorial, I will appreciate it.. 1. In my understanding, I can install and use RMySQL withouth having to install MySQL in my PC, to have access to and to create new tables . Is this

Dear R users, I need to rename the columns of a series of data frames. The names of the data frames and those of the columns need to be pulled from some vectors. I tried a couple of things but only got errors. What am I missing? #---create data frame dframes <- c("a","b","c") assign(dframes[2],data.frame(11:20,21:30)) #---rename the columns cols <-

Dear useRs, How come the first attempt to sort a POSIXt vector fails (Error: non-atomic type in greater), while the second succeeds? (Code inserted below.) The documentation says that POSIXt is used to allow operations such as subtraction, so I'd expect sorting to work. Is this perhaps an OS issue? (I run R 2.0.1 on Win xp.) Thank you, b. #------------code test <- c("2005-02-08

Dear useRs, Given this code I end up with a list of class "by": a <- sample(1:5,200,replace=TRUE) b <- sample(c("v1","v2","v3"),200,replace=TRUE) c <- sample(c(11,22,33),200,replace=TRUE) data <- runif(200) grouped <- by(data,list(a,b,c),function(x) {c(min=min(x),max=max(x), median=round(median(x),digits=2),mean=round(mean(x),digits=2))})

Dear R users, I'm interested in a combination of a scatterplot and an image graph. I have two large vectors. Because in the scatterplot some areas are sparsely and others densely populated, I want to see the points, and I also want their color to be changed based on their density (similar to a heat map). Is there a function that can do that? Thank you, b.

Hi All, My group is looking for any suggestions on what to purchase to achieve the most powerful number crunching system that $50k can buy. The main application that will be used is R so input on what hardware benefits R most will be appreciated. The requirements are that it be a single standalone server (i.e. not a cluster solution), and it that must be able to run unix/linux. If

Dear R users, I have a function (below) which encompasses several tests. However, when I run it, only the output of the last test is displayed. How can I ensure that the function root(var) will run and display the output from all tests, and not just the last one? Thank you, b. root <- function(var) { #---Phillips-Perron PP.test(var, lshort = TRUE) PP.test(var, lshort = FALSE)

Dear R users, This is a KDE beginner's question. I have this distribution: > length(cap) [1] 200 > summary(cap) Min. 1st Qu. Median Mean 3rd Qu. Max. 459.9 802.3 991.6 1066.0 1242.0 2382.0 I need to compute the sum of the values times their probability of occurence. The graph is fine, den <- density(cap, from=min(cap), to=max(cap), give.Rkern=F)

Dear useRs, I timed the same code (simulation with for loops) on the same box (dual Xeon EM64T, 1.5 Gb RAM) under 3 OSs and was surprised by the results: Windows XP Pro (32-bit): Time difference of 5.966667 mins 64-bit GNU/Linux (Fedora Core 4): Time difference of 6.966667 mins 32-bit GNU/Linux (FC4): Time difference of 9.2 mins (R 2.1.0 binaries downloaded from CRAN) I searched the

Dear useRs, I'm wondering why the for() loop below runs slower as it progresses. On a Win XP box, the iterations at the beginning run much faster than those at the end: 1%, iteration 2000, 10:10:16 2%, iteration 4000, 10:10:17 3%, iteration 6000, 10:10:17 98%, iteration 196000, 10:24:04 99%, iteration 198000, 10:24:24 100%, iteration 200000, 10:24:38 Is there something that can be done about

I'm completely new to R, and I'd like to do something like this: > x=c(1,2,3) > plot(x,x) At this point, R creates a file "Rplots.pdf", since the default device is PDF and the default filename is "Rplots.pdf". I know I can set the default device like this: > options(device="png") But is there a way to set the default device's

Hello R users! I just found out that I have 49 invitations for Gmail (gmail.google.com). I have been using it now for a while and is really nice. Don't forget 1 GB for free. I will invite those who respond to this mail by FIFO. -- Lep pozdrav / With regards, Gregor Gorjanc ------------------------------------------------------------------------ University of Ljubljana Biotechnical