similar to: ROracle error

I am running R 2.0.0, GOstats 1.1.1 and GO 1.7.0, and when I use the function GOHyperG, I have the following error: w1<-as.list(hgu95av2LOCUSID) w2<-unique(unlist(w1)) set.seed(123) myLL<-sample(w2,100) xx <- GOHyperG(myLL) Error in mget(x, env = GOTERM, ifnotfound = NA) : recursive default argument reference In fact first I tried this function with my locusId ' list (with

Dear R-users, In order to use ROracle (v. 0.5-5) package I compiled R-1.9.1 on Linux (2.4.20-28.9smp) and installed it. I need to use Oracle9i on Solaris. When executing "library(ROracle)" I got the following error message: > library(ROracle) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library

I have this error when I load the library ROracle: > library(ROracle) Loading required package: DBI Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library '/usr/local/lib/R/site-library/ROracle/libs/ROracle.so': /usr/local/lib/R/site-library/ROracle/libs/ROracle.so: undefined symbol: sqlclu Error in library(ROracle) : .First.lib failed for

Hi, I have a problem executing "library(ROracle)" in R: OS/Software: Redhat 8.0, all available patches applied Oracle 9i v9.2.0.1.0 R v1.7.0 ROracle v0.5-0 DBI v0.1-5 The compilation and installation of ROracle went fine. However when I try to load ROracle I get the following: >> library(ROracle) >Error in dyn.load(x, as.logical(local), as.logical(now)) : > unable

Hi, trying ROracle failed? I'm using Oracle.8.1.7 which is on another machine. With Tora i get access to the database what i wish to get with R-Project, too. What does the message mean? "Oracle pre-compiler proc not in /opt/oracle/OraHome1/bin/proc you may not be able to compile ROracle" I'm using linux sue9 and R.1.8.1. many thanks for any help! [snip]

Hi there, I am trying to install ROracle but I get this error. I have an error in reconcilePropertiesAndPrototype. (My LD_LIBRARY_PATH is set with the oracle lib) Thanks, Mathieu # R CMD INSTALL --configure-args='--enable-extralibs' ../ROracle_0.5-5.tar.gz * Installing *source* package 'ROracle' ... creating cache ./config.cache checking how to run the C preprocessor... cc -E

Hello, Someone posted this same issue back in May 2003 and hasn't yet resolved the situation. I hope someone can provide some additional light. After starting R I attempt to load the ROracle library and receive the following message: > library(ROracle) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library

Hi, I had problem during SJava and ROracle installation. I use "R CMD INSTALL -c SJava_0.65-0.tar.gz" command to install SJava pakage. After installation, I start R session and type library(SJava), error happened as: > library(SJava) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library

Hello everybody. I'm a newbie in R in a debian and linux in general I'm trying install roracle in my debian 64 bit system. I've read the http://cran.r-project.org/web/packages/ROracle/INSTALL and I've installed Oracel Instant Client by rpm package (using alien to deb convert). When I try to install I write export

Hello, I am running Linux, I have downloaded instantclient-basiclite-linux32-11.2.0.2.0.zip instantclient-sqlplus-linux32-11.2.0.2.0.zip instantclient-sdk-linux32-11.2.0.2.0.zip instantclient-precomp-linux32-11.2.0.2.0.zip All these tarballs are unzipped in /usr/local/lib/instantclient, I have added this path in the library path of the host. I can run sqlplus and proc, they do not complain

Hello, I am trying to configure my system with ROracle. I am running RHEL 3 AS x86_64. I have the Oracle client 9.2.0.4 x86_64. I have successfully compiled and run both R-1.8.1 and R-1.9.0 (tried ROracle on both installations). I am using DBI 1.8 and ROracle 0.5-4. I have used both the default Redhat installed gcc 3.2.3 and gcc 3.4. I am able to compile ROracle successfully with the

Hi there, I tried to install ROracle package (Windows XP pro), got the following errors; *C:\Program Files\R\R-2.6.2\bin>rcmd install "c:\ROracle_0.5-9.tar.gz"* * installing to 'c:/PROGRA~1/R/R-26~1.2/library'* *---------- Making package roracle ------------* * ********************************************** WARNING: this package has a configure script It

Buenas. Necesito conectarme a una BD Oracle desde linux debian y estoy probando a instalar el paquete ROracle para usar la misma forma de conectarme que tenía cuando usaban postgres. El tema es que al instalarlo me dice * installing *source* package ?ROracle? ... ** package ?ROracle? successfully unpacked and MD5 sums checked configure: error: OCI libraries not found ERROR: configuration failed

Hi, I am new to R. I need to communicate with Oracle from R program in windows xp. So I am planning to use ROracle. I downloaded the ROracle src from the site below: http://cran.r-project.org/web/packages/ROracle/index.html I am using R version 2.6.2 and Oracle 10g. I followed the instructions to build ROracle. When I try to compile the source src/Makefile.win I get the following error:

Hi, first thanks to Sunny Ho (and David James for the pointer) for resolving the problem of the empty rows returned from ROracle. However, I have a problem still: > library(ROracle) > ora <- dbDriver("Oracle") > con <- dbConnect(ora, user = USER, password = PWD, dbname = DBNAME) > rs <- dbExecStatement(con, "select * from USER_TABLES") Error in

I've seen from earlier posts that other people had problems installing ROracle under Windows. I run R-2.3.1. I got the Windows binaries for ROracle from http://stat.bell-labs.com/RS-DBI/download/index.html Here is my session: > require(ROracle) Loading required package: ROracle Loading required package: DBI [1] TRUE > drv <- dbDriver("Oracle") > drv

Howdy, When doing a install.packages("ROracle") in R I'm getting the following error: R CMD COMPILE RS-DBI.c make[1]: Entering directory `/tmp/R.INSTALL.1809/ROracle/src' gcc -I/usr/lib/R/include -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp -fPIC -O2 -m486 -fno-strength-reduce -g -c RS-DBI.c -o RS-DBI.o make[1]: Leaving directory `/tmp/R.INSTALL.1809/ROracle/src'

Context: Pentium 4 with FreeBSD 5.4 and R 2.2.0 I'm trying to install the package ROracle under R. To start with I installed the oracle8- client from the ports and referred to it via the variable $HOME_ORACLE as /usr/local/oracle8-client. Then I started R. After issuing install. packages("ROracle") R downloaded the needed package and started to compile it but complained:

Hi all - I am trying to install ROracle for linux machines ... I have read the INSTALL documentation and followed the directions for setting the paths as follows: export PATH=/app/oracle/product/10.2.0/db_1/bin:$PATH [manthony@diamondback ~]$ export LD_LIBRARY_PATH=/usr/lib:/usr/lib64:/lib:/app/oracle/product/10.1.0/db_1

Hi, I need to use ROracle to communicate with Oracle from R program in windows environment. I am using Oracle 10g, R 2.6.2. I found a pre-compiled binary for ROracle for Oracle version 9.2. When I am trying to use it with Oracle 10g I get the following error: con <- dbConnect(drv, "user/passwd at dbname"); Error in function (classes, fdef, mtable) : unable to find an inherited