similar to: R-1.9.1 on OS 10.2

Dear All, I need to calculate the variance components in a mixed effect model (one fixed and one random effect) with REML (maximizing the proportion of the likelihood that does not depend on the fixed effects). In S+ there is the varcomp function, but I would like to do it in R. Is there a way to do that? Thanks! Katalin ___ Katalin Csillery Division of Biological Sciences University of

Dear All, I have a function which takes a n x m matrix as an argument and returns an n x n matrix. I want to take bootstrap samples form the input matrix in the way as each row represent a multivariate observation, so each bootstrap sample would be an n x m matrix, and on each sample I want to calculate the n x n matrix. This task can be done with the sample function, but I would like to use

Dear All, I am trying to use the bca.ci function on a boot.out object which consists a few NaN's and I want to ignore those NaN's, and get a ci only for the "normal" values. boot.out$t has R number of values for 3000 different statistics, so when I use boot.ci(boot.out, index=i) and i happens to be a column in boot.out$t with some NaN's in there I get an error message. I

Hi, does anyone know how to make pairs of boxplots? E.g. 5 pairs of boxes. I figured a not very elegant way, by inserting a dummy NA field to the list where the data is given. So, where I have the dummy I got more distance between boxes, as a result it looks like groups. But I am having problems with putting the names under the groups, and the thick marks. Any better idea? Thanks, Kati ___

Hi, I have a coding problem. I have data pairs, and I want to calculate a parameter for the data pairs as a whole data set (so not using the information that thely are pairs) I am looking for bias in that certain parameter so I want to bootstrap these data pairs(!), and than calculate the parameter. I run into a coding problem. How should I define theta in order to resample the pairs, but than

Does anyone know how to coerce a list to an array? I have a list with equal sized matrixes and I want to coerce it to a 3D array. Why is that that I cannot feed in equal sized matrixes as layers to an array even if I set dim 3? Thanks! Katalin ___ Katalin Csillery Division of Biological Sciences University of Montana, Missoula MT 59801 Phone: 406 243 6106, E-mail: csillery at selway.umt.edu

Hi, I have a function which does a certain task with two vectors, f1 <- function(a,b){body} I also have a list of matrixes (all with the same dim's), and for each column of each matrix in the list I want to use "f1", in such way that it gives the vector "a" in the first argument of "f1". The second argument of the function "b" also comes form a

Beyond a general problem with X11, that it sometimes doesn't display -especially when it is inactive for a while- new windows (like new terminal, R device, or emacs) and only the restart helps, I found a problem which might also be especially the X11's problem. >From an apple Terminal window, the following code (which is the first boot.ci example) works just fine.

Full_Name: Dan Kelley Version: 1.9.0 OS: OSX (Darwin 7.3.0) Submission from: (NULL) (129.173.23.36) R-1.9.0 will not compile on Apple OSX (Darwin kernel 7.3.0). The error msg starts as follows, and has several more errors. gcc -dynamiclib -L/sw/lib -L/usr/local/lib -install_name /Library/Frameworks/R.f ramework/Versions/1.9.0/Resources/bin/libRlapack.dylib -o libRlapack.dylib dlapa ck0.lo

Hello, I want to bootstarp a sample, and I need table() for each sample taken, like if R=100, I need all 100 table(). It seems to mee that boot() works anly if you assing statistics, that gives you back one number, like mean. Although the ?boot/statistics says that it can be a vector containing statistics. table() gives an array, so it might work. Does anybody have an idea how? I konw it can be

I trying to compile R-.1.7.1 under OS X. Configure worked fine; then make crashes with: /sw/lib/libg2c.a(err.o) definition of common _f__formatted (size 4) /sw/lib/libg2c.a(err.o) definition of common _f__hiwater (size 4) /sw/lib/libg2c.a(err.o) definition of common _f__putn (size 4) /sw/lib/libg2c.a(err.o) definition of common _f__reading (size 4) /sw/lib/libg2c.a(err.o) definition of common

Greetings on A.N. Kolmogorov's 100th birthday: I am sure that this is a resolved problem, certainly it has been raised in R help several times before, but I can't seem to find the right clue. I've recently upgraded a G4 to OS 10.2.5 and I thought I would have another go at installing R from source, after failing to accomplish this in 10.1. So with 1.7.0 from CRAN configure seems to

Hello - I'm trying to compile R 1.7.0 on a PowerBook running OS X 10.2.5. I've compiled R (1.6.2) successfully before on this machine, under either 10.2.3 or 10.2.4. My gcc is from the latest Apple Developer Tools release and the g77 is up-to-date via Fink. R passes ./configure just fine, with the following options: R is now configured for powerpc-apple-darwin6.5 Source

I hope someone can point me, a newcomer to building R as well as 64-bit R, in a useful direction. I have a dual Opteron 275 box running RedHat EL4. I ran configure successfully, and, then, get the following error while running make: make[4]: Entering directory `/tmp/R-2.2.0/src/modules/lapack' g77 -fPIC -g -O2 -ffloat-store -c dlamc.f -o dlamc.lo g77 -fPIC -g -O2 -c dlapack0.f -o

I am using rw1001 on Windows 98. I have a package that involves both c and fortran code, which compiled successfully under cygnus b20.1 with Mummit Kahn''s port of gcc 2.95.2. I have upgraded to the new net release of cygwin (version 1.1, including the recent cygwin package upgrade to 1.1.1). Now when the dll for my package is being created, I get the string of errors like: [...] gcc

Hi, there I'm totally new to this. I used to use SPLUS, but think maybe useful to try R at home. But seems it doesn't like me. I got error message says ld: cannot open -lg2c: No such file or directory My OS is openlinux 2.3. I use egcs-2.91.66. I searched under /lib/egcs-2.91.66/ but found no libg2c.a. There's only a libgcc.a. Thought maybe g77 people changed

I have just installed the version of R for Linux Enterprise Server AS. When R is launched, I receive the following error message: R: error while loading shared libraries: libg2c.so.o cannot open shared object file: no such file or directory I have added the path to the library above to the /usr/etc/ld.so.conf file and then run ldconfig -v. The listing then shows that the libg2c.so.o is

Hi, My previous message is appended: I'm still struggling with building on AIX. I updated my config.site to follow the suggestions from R-admin: MAIN_LDFLAGS=-Wl,brtl SHLIB_LDFLAGS=-Wl,-G This led to an error during configure: checking whether mixed C/Fortran code can be run... configure: WARNING: cannot run mixed C/Fortan code configure: error: Maybe check LDFLAGS for paths to Fortran

I am trying to install R on Linux (Redhat 4). But 'yum' does not seem to work... thanks for your help/hints/suggestions in advance! ------------ $ sudo cat /proc/version Linux version 2.6.34.6-54.24.amzn1.i686 (mockbuild at build-31003.build) (gcc version 4.1.2 20080704 (Red Hat 4.1.2-48)) #1 SMP Fri Sep 17 23:13:59 UTC 2010 $ sudo yum install

Hi, While I was trying to build R 2.5.0 src on Red Hat Enterprise Linux ES release 4 (Nahant Update 4) Kernel 2.6.9-42.ELsmp on an x86_64 The following errors occurred: gcc -std=gnu99 -shared -L/usr/local/lib64 -o lapack.so Lapack.o -L../../../lib -lRlapack -L../../../lib -lRblas -lg2c -lm -lgcc_s /usr/bin/ld: /usr/lib/gcc/x86_64-redhat-linux/3.4.6/libg2c.a(s_cat.o): relocation R_X86_64_32