similar to: [Fwd: OpenBUGS]

Moi! A student here has been getting a bit irritated with some side effects of scale() (OS is Windows XP, the behaviour occurs in R 2.0.0, but not 1.7.1). The problem is that she scales a variable in a data frame, then does a regression, and tries to get some predictions for some new data. However, at this point she gets an error (see the example below). This seems to be because the

I'm sure I'm missing something obvious here, but I can't find the solution (including in the FAQ etc.). I have a vector of names of variables like this: NRes.x.y. where x and y are numbers. I want to extract these numbers as numbers to use elsewhere. I can extract the numbers as a list of characters using strsplit(), and convert that to a data frame, e.g.:

I have a simple (!) problem. What I want to do is to create a legend with Greek letters, and substituting numbers into the legend. Like this: mu=1:3 Mean=rep(mu, each=20) plot(runif(60), rnorm(60,Mean,0.1), pch=Mean) # create a plot legend(0.6,1.7, paste("mu =", 1:3), pch=mu) but with a Greek letter mu. I think the solution has something to do with substitute() possibly along with

I can only assume I'm betraying my ignorance here, but this is not what I would expect. I'm getting the following from a stepwise selection (with both step and stepAIC): > step(lm(sqrt(Grids)~ SE + Edge + NH), scope=~ (Edge + SE + NH)^2) Start: AIC= 593.56 sqrt(Grids) ~ SE + Edge + NH Df Sum of Sq RSS AIC <none> 2147.0 593.6 + Edge:NH 1

Please consider a data frame A B C D 1 4 5 0 2 3 2 75 3 4 1 84 4 5 1 90 5 3 0 100 Is there a way to plot column B and C as barplot *and* D as line on the same graph?? R-2.0.1 powered by Mandrake 10.1 ------------------------------------------------------------------------------------------------------------------------- Landini dr. Massimiliano Tel. mob. (+39) 347 140 11 94 Tel./Fax. (+39)

Hello, can anyone tell me if R has any special function for simulating the structure of human populations? Something like the genetic algorithm? I need to simulate a sample of a population with a specific structure. Is there something on R that can help me? Thanks to everyone. __________________________________________________________

The background: I'm trying to fit a Poisson-lognormal distrbutuion to some data. This is a way of modelling species abundances: N ~ Pois(lam) log(lam) ~ N(mu, sigma2) The number of individuals are Poisson distributed with an abundance drawn from a log-normal distrbution. To fit this to data, I need to integrate out lam. In principle, I can do it this way: PLN1 <- function(lam, Count,

Dear friends, Over the past weeks, I have been asking a lot of questions about how to use R in Bayesian analysis. I am brand new to R, but I am very pleased with it. I started with winbugs but I found winbugs to be a limited software, not bad but has several limitations. By contrast, R allows the analyst to tackle any problem with a huge set of tools for any kind of analysis. I love R. In

4000:6000 gives you 4000, 4001, ..., 6000. I suspect you want population= c(seq(4000, 6000, length=5), seq(3500, 4300, length=5), seq(3000, 3200, length=5)) Bob On 20 September 2017 at 17:07, Shivi Bhatia <shivipmp82 at gmail.com> wrote: > Hi Team, > > I using the syntax as: > > data.df<- data.frame( > city= c(rep(c("Delhi",

Dear all, I have several questions regarding fisher.test() in R, and I'd highly appreciate any help with it. I have a group of observations, each having people's income, and an indicator of whether selected in or out a program. I want to test the difference between income of people who are in and out. Because the distribution is far from normal, I decide to use the fisher's exact

Dear all, I have several questions regarding fisher.test() in R, and I'd highly appreciate any help with it. I have a group of observations, each having people's income, and an indicator of whether selected in or out a program. I want to test the difference between income of people who are in and out. Because the distribution is far from normal, I decide to use the fisher's exact

Hello list, I?ve been trying to get OpenBUGS running on my mac using the wine emulator. I can run Openbugs just fine by doing: wine ~/OpenBUGS312/OpenBUGS.exe In the terminal, so OpenBUGS works. When I try to run the schools example using rbugs(), the OpenBUGS process starts in wine, but it just sits there, no log, no script, no output of any sort. The rbugs () call makes the init,

Dear All, I am trying to use the glmmBUGS package with OpenBUGS under Linux. Here is a short list of code I modified from the diseasemapping package document: ---------------------------------------- library(diseasemapping) data(popdata) data(casedata) model = getRates(casedata, popdata, ~age*sex, breaks=seq(0, 90, by=10) ) ontario = getSMR(popdata,model, casedata) spplot(ontario,

Hello ALL! I am running Linux, Fedora 15 64-bits, and R on it. I need to use WinBUGS and R2WinBUGS, but as far as I read, WinBUGS is closed project, to be continued with/as OpenBUGS. Thus, I have found R2OpenBUGS on OpenBUGS Contributed Code (http://openbugs.info/w/UserContributedCode), not on CRAN. Author(s) states that it is equivalent for R2WinBUGS. I tried briefly, and realized few minor

Hi All, I am trying to figure out how to use R-Coda with the output from OpenBugs. I have installed and loaded the packages BRugs and R2WinBUGS. I have successfully run a simple Bayes model in WinBUGS using R2WinBUGS' "bugs" and have used "read.bugs" to build the coda object. I can successfully switch to OpenBugs and run the same model and get the basic summary

I'm using the RIP Linux mini rescue distribution. http://www.tux.org/pub/people/kent-robotti/looplinux/rip/ I have modified v. 7.0 for usage on our 32 node Tyan Tiger MPX Linux cluster with a serial console. Because of a bug with Grub on this motherboard when running headless and using a serial console I use the optional Isolinux version 2.08 also included with RIP Linux to boot from a

Dear list, I'm trying to embed OpenBUGS in an R package for use of it on 64-bit Linux. In order to get the CLI working one has to compile C code contained in $OpenBUGS/Manuals/CBugs.html (copied to say CBugs.c) using gcc -m32 -o bugs CBugs.c -ldl I put the OpenBUGS distribution in the ./inst subdirectory of the package root. Where should I now put the CBugs.c and how

After so many questions and a considerable delay (almost entirely my fault), the BRugs package version 0.7-4 has been released yesterday. The BRugs package is available from CRAN master already as source and in binary form for Windows and will be synced by the mirrors shortly. Note the following changes (more details in the NEWS file): BRugs works on Linux now BRugs now supports 64-bit R on

After so many questions and a considerable delay (almost entirely my fault), the BRugs package version 0.7-4 has been released yesterday. The BRugs package is available from CRAN master already as source and in binary form for Windows and will be synced by the mirrors shortly. Note the following changes (more details in the NEWS file): BRugs works on Linux now BRugs now supports 64-bit R on

Hello, I'm running R version 3.4.2 on Windows. I have a program written in BUGS which I can successfully run from the R2WinBUGS package. I would also like to try and use the same package to use OpenBUGS (version 3.2.3) rather than WinBUGS. The initial output looks ok (shown below), but the OpenBUGS executable is never started. Instead I see a process running called ?BugsHelper.exe *32? in