similar to: Building problem: leftover from old OS

I am moving my first steps in writing and compiling C code and calling it from R. (I am also new to shared libraries...) My problem is that my C code uses a C function contained in another library (".a", not ".so" - is that the problem?). This is how I compile the file with the functions I want to call from R: cd /export/home/gpetris/ R SHLIB tryit.c cc

I installed R-1.4.0 and then updated all the packages I have, using update.packages(). I got an error for splancs and sgeostat. Trying to install them 'manually' with R CMD INSTALL, I got the following errors. 1) for splancs: Tue<15:26>library[82]#R CMD INSTALL splancs_2.01-5.tar.gz Installing *source* package `splancs' ... libs f95 -PIC -xO5 -dalign -xlic_lib=sunperf -c

Full_Name: rodney sparapani Version: 1.9.0 OS: Solaris 9 Submission from: (NULL) (141.106.120.97) I'm following the instructions for the Sun Forte compiler. I had success with 1.8.1 so I think the compiler settings are correct (config.site): CC="cc -xarch=v8plusa" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v8plusa" FFLAGS="-xO5

Dear All, I am building R-1.3.1 on Solaris 2.7 and I am trying to use the native SUNperf BLAS/LAPACK. I have added the flags ("-dalign -xlic_lib=sunperf") for the compilers in the config.site file. What is not clear to me is what I have to do with the "--with-blas" flag for ./configure. It seems to me that omitting it is not enough. Any suggestions? Another question, I

System details: -------------- Sun Blade 1000, Solaris 8, Sun ONE Compiler Suite (rebranded Forte 7), R versions 1.6.0 and 1.6.2 - suspect others are affected, too Problem description: ------------------- Using the recommended env var setting from p.15 of the Admin Guide, the configure script fails the sgemm sunperf test, even though the sunperf libraries are available Not linking with

This is a little success story about the benefits of changing the defaults in config.site when I was building R-1.4.0 for Solaris (on a Sun Sparc that I'm currently using). For previous versions of R, I had just used the default config.site and not given it any thought. Since the Sun machine that I'm using is not getting any faster, I decided I would give config.site a look when building

I have just installed R 1.9.1 on an old Sun Sparc with the following specs: version Machine hardware: sun4u OS version: 5.6 Processor type: sparc Hardware: SUNW,Ultra-4 The following components are installed on your system: Sun Visual WorkShop C++ 3.0 Sun WorkShop Compiler C 4.2 Sun WorkShop Compiler C++ 4.2 Sun WorkShop Tools.h++ 7.0

I am trying to install RMySQL on OpenSolaris and need to pass some options to configure. Tried the 3 recommended ways of doing it and nothing works, configure cannot find the headers and the libs. I ran configure manually and that worked fine ./configure CC=cc CFLAGS="-dalign -KPIC -xlic_lib=sunperf" LDFLAGS="-L/usr/sfw/lib

Hmnnn... This is the third version of R I have installed and I am stumped on this one. There is some unresolved external I cannot find... /opt/SUNWspro/bin/cc -v -o R.bin CConverters.o Rdynload.o RNG.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cov.o cum.o dcf.o datetime.o debug.o devPS.o devPicTeX.o deparse.o

Hi, After reading some of the posting in this list, I came across this posting from: From: Peter Dalgaard <p.dalgaard_at_biostat.ku.dk> Date: Fri 29 Oct 2004 - 08:02:40 EST Replying to Re: [R] Errors during make check He described a problem similar to mine, that build 64-bit R (I am building R version 2.0.1) with sunperf library gives a core dump during make check. So I configured my

Dear R user, I try to build R-2.8.1 on SunOS 5.9, and use following command: CC="cc -xarch=v9" CFLAGS="-xO5 -xlibmil -dalign" F77="f95 -xarch=v9" FFLAGS="-xO5 -xlibmil -dalign" CXX="CC -xarch=v9" CXXFLAGS="-xO5 -xlibmil -dalign" FC="f95 -xarch=v9" FCFLAGS="-xO5 -xlibmil

Full_Name: Jeremy Fox Version: 1.5.0 OS: Solaris 8, 64 bit Submission from: (NULL) (171.64.232.63) I am compiling R under Solaris and the compilation stops at this point. The problem only happens when I link in readline. The R binary is actually compiled and readlne works. The main problem with the compiled binary (other than that all the supporting files were not correctly installed) is that

Hello, Apologies for the post here. I have read the R-Admin (learned a lot!) and searched the web for days, but still fail at compiling R on my Ultra 20 running solaris 10 x86 1/06. This is the tail of './configure' output: ..... checking for dlopen in -ldl... yes checking readline/history.h usability... no checking readline/history.h presence... no checking for readline/history.h... no

I am trying to install R 1.9.1 on a 5-year-old Sun: here is the description: version Machine hardware: sun4u OS version: 5.6 Processor type: sparc Hardware: SUNW,Ultra-4 The following components are installed on your system: Sun Visual WorkShop C++ 3.0 Sun WorkShop Compiler C 4.2 Sun WorkShop Compiler C++ 4.2 Sun WorkShop Tools.h++ 7.0

Invocation of randomForest() using the iris example in the help file crashes R with a segmentation fault. This happens on all of our ultraSPARC machines running Solaris 2.7. We're using R-1.4.1, compiled using Sun cc and f77 and the flags: CC=cc CFLAGS="-xO5 -xlibmil -dalign" FC=f77 FFLAGS="-xO5 -xlibmil -dalign" "make check" runs withour errors, and R has been

I am trying to install RMySQL on OpenSolaris and need to pass some options to configure. Tried the 3 recommended ways of doing it and nothing works, configure cannot find the headers and the libs. I ran configure manually and that worked fine ./configure CC=cc CFLAGS="-dalign -KPIC -xlic_lib=sunperf" LDFLAGS="-L/usr/sfw/lib -L/usr/lib -L/usr/local/lib

Hi, I'm working on a server with a sparcv9 chip using SunOS 5.9 Generic May 2002. The compilers are the Sun Studio 12 compilers. I'm trying to build a 64-bit version of R-2.6.1, and while the configure script runs, the make does not. Here are the options I set in config.site: ________________________________________________________________________ _ R_PAPERSIZE=letter CC="cc

I had a hard time building 1.9.1 with the Sun One Studio on Solaris (SPARC) almost 2 years ago. I filed a bug report, but I can't seem to find it right now. For 2.3.1, I discovered that the same problems remain. Here are the tricks that resolved them for me if anyone is interested. #1. /usr/lib/cpp will give you nothing, but headaches. Fortunately, the Solaris Software Companion CD (SSCC)

Is there a way of `restarting' split.screen? This is what I am getting: > close.screen() [1] 10 11 12 13 > close.screen(all=TRUE) Error in par(args) : parameter "i" in "mfg" is out of range > graphics.off() > x11() > close.screen() [1] 10 11 12 13 > close.screen(all=TRUE) Error in par(args) : parameter "i" in "mfg" is out of range As

Hi, I am compiling R2.8.1 on a Sun M4000 machine with Solaris 10. I am using Sun Studio 12. I get the following error: cc -xtarget=native64 -G -L/usr/sfw/lib/sparcv9 -L/opt/csw/lib/sparcv9 -o grDevices.so chull.o devNull.o devPicTeX.o devPS.o devQuartz.o init.o mkdir ../../../../library/grDevices/libs Warning in solve.default(rgb) : unable to load shared library