similar to: Vaseplots

I am looking to replicate the functionality of the JMP diamond plot in R. I have found the following enhancement and no other references(see below). I have tried to contact the author via email and I have had no luck. Does any know if this functionality exists in R? If it does not does anyone know how to contact the author of the enhancement request? "Hi, I experimented with a set of S

You asked the same question on the Bioconductor mailing list back in August. At that time, you suggested yourself a solution for how the adjusted p-values should be interpreted. I answered your query and told you that your interpretation was correct. So I'm not sure what more can be said, except that you should read the article Wright (1992), which is cited in the help entry for p.adjust(),

Hi, Color of my step plot is now by default. Now I'd like to change the color as the grey scale I specified. I don't know why I got three black plot. Here I attach two version of codes. The first one produces a step plot with color by default. The second one, modified from the first one, is not producing the grey scale I want. Any help would be highly appreciated. [version 1- working]

Hi all, I''m installing the latest version of puppet (opensource) for Windows on Windows 2008 Server (At Amazon EC2). For some reason, Puppet''s scheduled task is configured to run every 20 hours instead of the desired 30 minutes (as shown in - http://docs.puppetlabs.com/windows/running.html) Is it a bug in Puppet? Is it something that I misconfigured? Screenshot of the

Hi, I wonder whether the following is possible with R, and whether anyone has done that and can share his/her code with me. I have a correlation matrix, and I want to create a correlation table that I can copy to Microsoft Word with a superscript above each correlation, indicating significant differences in the same row. That is, when correlations in the same row do not share superscript, it means

Hi, I have a (correlation) matrix and I want to select a subset of its cells depending on the combination of their column and row names. This illustrates my problem: mtrx <- matrix(c(1,2,3,4,5,6,7,8,9), nrow=3, ncol=3, dimnames = list(c('c132','c432', 'c233'), c('r132','r233', 'r432')))> mtrx r132 r233 r432c132 1 4 7c432 2

The Partek package (www.partek.com) allows only two selections for Multiple Test Correction: Bonferroni and Dunn-Sidak. Can anyone suggest why Partek implemented Dunn-Sidak and not the other methods that R has? Is there any particular advantage to the Dunn-Sidak method? R knows about these methods (in R 2.1.1): > p.adjust.methods [1] "holm" "hochberg" "hommel"

L.S. In the current version of ?p.adjust.Rd, one needs to scroll down to the examples section to find confirmation of one's guess that "fdr" is an alias of "BH". Please find a patch in attachment which mentions this explicitly. Best, Tobias -------------- next part -------------- A non-text attachment was scrubbed... Name: p.adjust.Rd.patch Type: text/x-patch Size: 633

Dear R Users, Before running ksmooth( ), a suitable bandwidth selection is needed. I use some functions for this task and receive these results for my data: width.SJ(y,nb=100,method="ste") : 40.25 bcv(y,nb=100) : 40.53 ucv(y) : 41.26 bandwidth.nrd(y) : 45.43 After implementing the function ksmooth(x,y, bandwidth= each of abovementioned bandwidths), I have some NAs

Hello, I'm having a problem with my stick (Saitek ST290 Pro) under wine on ubuntu - Windows game doesn't respond at all to POV buttons. On Mandriva and debian Lenny everything works - just ubuntu gives me trouble. jstest also responds to the POV buttons. I tried playing with the DirectInput registry entry, but didn't get anywhere. Any suggestions? TIA -------------- next part

Dear Sir, Madam, or to whom this may concern, my name is Jan Failenschmid and I am a Ph.D. student at Tilburg University. For my project I have been looking into different types of kernel regression estimators and corresponding R functions. While comparing different functions I noticed that stats::ksmooth returned different estimates for the same bandwidth as other kernel regression estimators

I am working with a model that I have to estimate a nonparametric function. The model is partial linear i.e. Y=X$\beta$ + f(z) + $\epsilon$ I am using the ' double residual methods' Robinson (1988) Speckman (1988) where I estimate a nonparametric function for each of the parametric variables in terms of the nonparametric one i.e. X[,i]=g(Z)+ u this is done because I need the $E(

Hi Every Body, I don't know why some regression functions have no related prediction function. For example lowess, loess, lokerns, lpridge, lpepa, and ksmooth. What could help? Is there any global or wrapper function so that can help? Regards, Amir Safari --------------------------------- [[alternative HTML version deleted]]

I'd like to superimpose a ksmooth() onto a barplot(). My data is: > d 2009-06-20 2009-06-21 2009-06-22 2009-06-23 2009-06-24 2009-06-25 2009-06-26 2009-06-27 2009-06-28 2009-06-29 2009-06-30 2009-07-01 2009-07-02 Same Breed (B) 12.64 21.08 13.52 12.51 13.71 9.91 14.24 7.18 11.81 5.92 12.04 17.96

Dear R contributors, I suggest adding a new method to `p.adjust` ("Adjust P-values for Multiple Comparisons", https://stat.ethz.ch/R-manual/R-devel/library/stats/html/p.adjust.html). This new method is published in Benjamini, Krieger, Yekutieli 2016 Adaptive linear step-up procedures that control the false discovery rate (Biometrika). https://doi.org/10.1093/biomet/93.3.491 This paper

Hello, I want to do regression or missing value imputation by knn. I searched r-help mailing list. This question was asked in 2005. ksmooth and loess were recommended. But my case is different. I have many predictors (p>20) and I really want try knn with a given k. ksmooth and loess use band width to define neighborhood size. This contrasts to knn's variable band width via fixing a

Hi Does R have a function or has someone written a function to draw a 3d surface from a scatter plot of values using either ksmooth or locpoly. OR a transform function a that merges x relation z and y relation z to (x,y) relation z? I tried out scatterplot3d but it seems it would take a bit of work to get scatterplot3d to draw a curved surface. Lawrence

Hello, I'm running samba on a Linux server. I want to login to that samba share from another computer not located in that specific network. I want to be able to "open" my samba server so everyone will be able to login to it. I'll secure this unsecured option using Firewall, restricting those specific ports only for the IP I would like to login from. What's

All: I am trying to use gam in a scatterplot smoothing problem. The data being smoothed have greater 1000 observation and have multiple "humps". I can smooth the data fine using a function something like: out <- ksmooth(x,y,"normal",bandwidth=0.25) plot(x,out$y,type="l") The problem is when I try to fit the same data using gam out <-

Hello I am running R 1.8.1 on a Windows platform I am attempting to fit an ordinal logistic regression model, using the polr function, as described in Venables and Ripley. But when I try model4 <- polr(ypsxcat~committed + as.factor(sex) + as.factor(drugusey) + anycsw + as.factor(sex)*committed + as.factor(sex)*as.factor(drugusey)+as.factor(sex)*anycsw, data = duhray) I get a message