similar to: osx/fink: cannot do "R INSTALL" (library mixup)

Begin forwarded message: > From: Dan Kelley <Dan.Kelley at Dal.Ca> > Date: March 19, 2004 12:00:01 PM AST > To: Don MacQueen <macq at llnl.gov> > Subject: Re: [R] osx/fink: cannot do "R INSTALL" (library mixup) > > That works perfectly! THanks. I did > 524 export PKG_LIBS="-L/usr/local/lib -L/sw/lib" > 525 R INSTALL pspline > and

Hi, I'm wondering if it is possible to install a package for R 2.0 on R 1.9.1 on Mac OS X? I'm getting this error which seems to be known issue: library("quantreg") Error in firstlib(which.lib.loc, package) : couldn't find function "lazyLoad" In addition: Warning message: package quantreg was built under R version 2.0.1 Error in

I would like to request help with the installation of dse in raqua in mac os x 10.3. I get the following error message after the messages indicating that parts were successfully installed. I would be most grateful for a solution. ----------------------------------------- * Installing *source* package 'setRNG' ... ** R ** inst ** help >>> Building/Updating help pages for

Hi there, I ran into some trouble trying to install the dse library on os 10.3 with RAqua as the installation of the dse1 package failed. On the R console I got the error message Warning message: Installation of package dse had non-zero exit status in: install.packages(ui.pkgs, CRAN = getOption(where), lib = .libPaths()[1]) > and the console of the os x said gcc -bundle -flat_namespace

Hi. I'm not having any luck installing the binary for the new Macintosh OS called "Tiger". I get error messages as below. Can anyone offer me some advice? (PS: I checked the bug list first but a search on "Tiger" turned up nothing so I hope it's OK to post here.) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared

I have a package that contains some fortran code. It has been built in the past, but now I have an updated Apple OSX 10.4 (Tiger) system, and it fails. The behaviour is as follows $ R CMD CHECK oce ,,, gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o oce.so geoddist.o ocecp.o rho.o spice.o strho.o theta.o tsrho.o -

Q: Has anyone implemented cartograms [**] in R? A search on the R site turned up https://stat.ethz.ch/pipermail/r-sig-geo/2005-December/000698.html which led to http://www.okada.jp.org/RWiki/index.php?cmd=read&page=Rmap%A4%F2%BB% C8%A4%C3%A4%BF%C3%CF%BF%DE%C9%BD%BC%A8&word=Rmap#content_1_35 which has (one form of) a cartogram as a PNG, but which doesn't seem to have code. (The

Hello. I'm having difficulties getting R_alloc() to work. The test platform is a 64-bit Mac running R 2.2.1 installed via a .dmg file obtained from the R site. Details are given below, in a level of detail that I hope is appropriate. My eye was particularly drawn to line #2 in the gdb 'where' output, but line #1 seems sensible so I may just be displaying my ignorance by

hello, I create a package which includes C code and Lapack. But when I run " R CMD check ". an error message, "/usr/bin/ld: cannot find -lfrtbegin " occurs. could you tell me what is the problem? the detailed message is as follows: [credsim@confsys ~/src]$ R CMD check var * checking for working latex ... OK * using log directory '/home/credsim/src/var.Rcheck' *

hi, my attempt to install the package Hmisc v3.0-1 fails with the message: /usr/bin/ld: cannot find -lfrtbegin collect2: ld returned 1 exit status make: *** [Hmisc.so] Error 1 ERROR: compilation failed for package 'Hmisc' i'm at a loss here. any hints will be very much appreciated. i'm running: debian stable R version 2.0.1 gcc 2.95.4-14 g77 2.95.4-14 binutils 2.12.90.0.1-4

Dear all, I have a problem installing a package required by Hmisc on MacOS 10.3.5 with R 2.00. g77 -fno-common -g -O2 -c avas.f -o avas.o g77 -fno-common -g -O2 -c rlsmo.f -o rlsmo.o gcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o acepack.so ace.o avas.o rlsmo.o -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2

QUESTION: how should I do a linear regression in which there are errors in x as well as y? SUPPLEMENT: I've seen folks approach this problem by computing eigenvectors of the covariance matrix, and that makes sense to me. But I'm wondering if this has a "pedigree" (i.e. if it makes sense to folks on this list, and if it's something that has been published, so I can refer to

Hello everybody. I've been experimenting with mapply(). Does anyone else have problems with: R> mapply(rep,times=1:4, MoreArgs=42) (I get a seg fault). robin R> R.version _ platform powerpc-apple-darwin6.6 arch powerpc os darwin6.6 system powerpc, darwin6.6 status beta major 1 minor 8.0 year 2003 month 10 day 02 language R >

Is there an R function that automatically writes all input and output to a file? I would at least like it to log all the commands I enter, and to preferably also write the standard output to the file as well as to the screen. (The ideal would be to write the input to one file and both the input and output to another file.) I tried R2HTML for this, but I could not get it to work consistently. I am

--KsGdsel6WgEHnImy Content-Type: text/plain; charset=iso-8859-1; format=flowed Content-Disposition: inline Content-Transfer-Encoding: 8bit Hi, people. Wandering in R archives, and seeing the message attached below, I noticed that: mapply(rep,times=1:4, MoreArgs=42) still segfaults on R 2.2.0, and thought I should be a good citizen and report it, even if I do not have an actual problem

In Mac OS X native version: The R shell wrapper (bin/R) overrides default library search path with DYLD_LIBRARY_PATH and adds (among others) /usr/X11R6/lib. This causes problems when modules need (directly or indirectly) libraries from Apple's frameworks which are masked by X11. Examples for such packages are SJava and RGL. SJava needs JavaVM which in turn loads OpenGL framework. RGL

Hi, I'm trying to using pspline in bic.surv{BMA}. ############################# library(BMA) library(survival) data(veteran) test.bic.surv<- bic.surv(Surv(time,status) ~ karno+pspline(age,df=3)+diagtime+prior, data = veteran, factor.type = TRUE) summary(test.bic.surv, conditional=FALSE, digits=2) ############################# The results are:

Always reply to the list. I do not do private consulting. (I have cc'ed this to the list). I still think this belongs on stackexchange, not r-help. I think you need to read up on the mathematics of spline bases. Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his

To whom it may concern, I don't know whether this is really a bug with the Pspline package or only a problem with my installation. Things work fine in Linux but not in Mac OS X (Darwin). Both system run the latest public versions of R and Pspline. predict.smooth.Pspline produces only NaN instead of predicted values when norder>2: > library (Pspline) > tt <- seq

Dear R users: I am not entirely convinced that clogit gives me the correct result when I use pspline() and maybe you could help correct me here. When I add a constant to my covariate I expect only the intercept to change, but not the coefficients. This is true (in clogit) when I assume a linear in the logit model, but the same does not happen when I use pspline(). If I did something similar