Displaying 20 results from an estimated 700 matches similar to: "build fails to build help for nlme"
2008 Dec 15
1
bug in R CMD INSTALL do_install under OS X
Hi, I believe I've encountered a bug in the do_install function in the
script used by R CMD INSTALL. I'm using R 2.8.0 under OS X 10.5.5. I was
trying to install a package from source (the package gaga which I maintain,
which I checked and builds correctly for R 2.8.0) when I get the error
message
* Installing to library '/Users/drossell/Desktop/R-2.8.0/library'
2020 Jun 23
4
Restrict package to load-only access - prevent attempts to attach it
Hi,
I'm developing a package whose API is only meant to be used in other
packages via imports or pkg::foo(). There should be no need to attach
this package so that its API appears on the search() path. As a
maintainer, I want to avoid having it appear in search() conflicts by
mistake.
This means that, for instance, other packages should declare this
package under 'Imports' or
2010 Jun 09
2
Question on trying to build R 2.11.1 on Tru64(aka OSF1)
First I tried 'setenv R_SHELL /usr/local/bin/bash', as bash is the weapon
of choice for the faculty wishing to use R, then ran ./configure as before.
The ./configure output line
using as R_SHELL for scripts ... /usr/local/bin/bash
would seem to indicate that the R_SHELL environment variable was recognized
and acknowledged. However, I got the same build error:
gnumake[2]: Entering
2004 Oct 05
1
R 2.0.0: problem: installing --with-package-versions
Hello R developers,
installing R 2.0.0 from source on a Linux Debian system (gcc 3.2.2)
- which worked just fine - I encountered the following problem when trying to
update/install packages with the option --with-package-versions:
example: RUnit 0.4.0 (also on CRAN)
R20 CMD INSTALL -l /mnt/local/R/R-2.0.x-libs-EpiR --with-package-versions
RUnit_0.4.0.tar.gz
or after untaring
R20 CMD INSTALL
2012 Oct 18
1
R CMD check --force-biarch
I'm having problems getting R CMD check to work correctly on Windows 7 (64 bit) in a package that uses C code. What I want to do is to be able to pass the equivalent of the "--force-biarch" option to check, but this is only supported for INSTALL.
Background:
I'm writing a package (RNetica) which forms a link between R and a third-party library (Netica.dll). The vendor supplies
2012 Nov 28
1
R CMD check --force-biarch
I'm having problems getting R CMD check to work correctly on Windows 7 (64
bit) in a package that uses C code. What I want to do is to be able to pass
the equivalent of the "--force-biarch" option to check, but this is only
supported for INSTALL.
Background:
I'm writing a package (RNetica) which forms a link between R and a
third-party library (Netica.dll). The vendor supplies
2006 Jul 10
1
Add .git to SCM excludes for build and INSTALL scripts
Git is a source code management system like CVS, svn, arch, and
others.
It would be nice to add exclude support to R CMD build and INSTALL so
that the .git subdir of an R package is handled appropriately.
Here is a possible patch:
diff --git a/src/scripts/INSTALL.in b/src/scripts/INSTALL.in
index 75da9db..09e5ab5 100644
--- a/src/scripts/INSTALL.in
+++ b/src/scripts/INSTALL.in
@@ -863,7
2009 Jun 29
1
Installing DLL elsewhere than in \libs?
Hello,
Its a couple of days I am fighting with this problem, and cannot find a
solution. I need to compile a DLL that is not directly used by R, but
must be installed elsewhere (it is indeed part of a Tcl/Tk package). So,
I want to install it in /tklibs/tkpackage/alib.dll (under Windows) in my
compiled package.
I do manage to compile it in /src, but cannot copy it at the right
place. I
2007 Apr 26
1
Problem with R-2.5.0 patched and Matrix package
Hi,
Using latest R 2.5.0 Patched, I'm unable to install the Matrix package
from cran.fhcrc.org.
I get:
Creating a new generic function for "isSymmetric" in "Matrix"
Creating a new generic function for "unname" in "Matrix"
Error in conformMethod(signature, mnames, fnames, f) :
In method for function "!": formal arguments omitted in
2003 Sep 22
1
anybody running Rggobi on a redhat 9.0 system?
Hi
my installation of ggobi (!) was successful, but when I try to install
Rggobi as described on http://www.ggobi.org/INSTALL.html:
as non-su:
R_HOME=/usr/lib/R
export R_HOME
GGOBI_ROOT=/usr/local/src/ggobi
export GGOBI_ROOT
R_LIBS=/usr/lib/R/library
export R_LIBS
as: su
ln -s $GGOBI_ROOT/lib/libggobi.so /usr/lib/.
ln -s $GGOBI_ROOT/lib/libgtkext.so /usr/lib/.
R CMD INSTALL Rggobi_0.53-0.tar.gz
2015 Oct 22
1
Missing parenthesis in R-exts.texi
Line 1204 (right now) of svn/r-devel/doc/manual/R-exts.texi has
dest <- file.path(R_PACKAGE_DIR, paste0('bin', R_ARCH)
which lacks a closing ) -- two open, only one close right now.
Dirk
[1] I would have reported a bug, but I am aware of a recent and
not-so-friendly response when bugzilla was used to report a typo.
--
http://dirk.eddelbuettel.com | @eddelbuettel | edd at
2003 Oct 01
1
installing DBI_0.1-6.tar.gz
Dear,
I tried to install the DBI package in R-1.7.1, but this gave the
following error:
/volume1/scratch/jallemee/R/lib/R/bin/INSTALL: line 1: 1856
Done ( echo
"options(save.image.defaults=${save_image_defaults})"; if test
-s R_PROFILE.R; then
cat R_PROFILE.R;
fi; echo
2004 May 10
1
Solve for "Please set TMPDIR to a valid temporary directory"
Dear R Help,
My apologies if this is widely known, but I didn't find this in the R
archives.
I am running WinXP pro and R 1.90. Rcmd build or check fails with the
error: "Please set TMPDIR to a valid temporary directory"
$TMPDIR is set to $TMPDIR or C:/TEMP in share\perl\R\Var.pm. TMPDIR or
c:\temp do not exist on WinXP on my laptop. I have C:\WUTemp and the
env variables
2010 Jun 10
1
HOW to install RSQLite database
Please let me know where i have to type below thing to RSQLite database get
installed.Please let me know the solution.Thanks in advance
RSQLite -- Embedding the SQLite engine in R
(The RSQLite package includes a recent copy of the SQLite
distribution from http://www.sqlite.org.)
Installation
------------
There are 3 alternatives for installation:
1. Simple installation:
R CMD
2006 Apr 24
1
R CMD build says, 'Can't call method "print"'
Hi,
While running R CMD build on one of the Bioc packages, I'm getting the
following error message
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
Can't call method "print" on an undefined value at /home/sfalcon/arch/x86_64/R-2.3/bin/build line 646.
The pacakge has CRLF line endings in source files.
>
2020 Jul 17
0
Restrict package to load-only access - prevent attempts to attach it
Hi Henrik,
A bit late, but you can take a look at smbache's {import} package [1]
in case you didn't know it. I believe it does what you are describing.
[1] https://github.com/smbache/import
I?aki
On Tue, 23 Jun 2020 at 22:21, Henrik Bengtsson
<henrik.bengtsson at gmail.com> wrote:
>
> Hi,
>
> I'm developing a package whose API is only meant to be used in other
2017 Apr 06
3
failure of make check-all
This run was done this AM on my linux box, and older 32 bit Dell optiplex (core 2 duo).
The failure message is at the very end. (It's due to be replaced in a couple of weeks.)
The sequence of steps was
svn up
tools/rsync-recommended
./configure
make
make check-all |& tee zzz
Terry T.
Result of ./config
R is now configured for i686-pc-linux-gnu
Source directory: .
2007 May 27
2
[Bioc-devel] promptClass
promptClass fails to identify methods associated with the class. Here
is a fix:
Index: promptClass.R
===================================================================
--- promptClass.R (revision 41719)
+++ promptClass.R (working copy)
@@ -165,7 +165,7 @@
if (nmeths > 0) {
.meths.body <- " \\describe{"
for (i in 1:nmeths) {
- .sigmat
2017 Apr 06
0
failure of make check-all
You may want to retry that after a make distclean, in case anything changed in the toolchain.
-pd
> On 6 Apr 2017, at 14:43 , Therneau, Terry M., Ph.D. <therneau at mayo.edu> wrote:
>
> This run was done this AM on my linux box, and older 32 bit Dell optiplex (core 2 duo). The failure message is at the very end. (It's due to be replaced in a couple of weeks.) The sequence
2003 Feb 19
3
Pretty onscreen plots?
I'm looking for ideas for creating high-quality plots for use in projected
presentations (powerpoint, etc) --- ideally high-quality png, jpg, bmp.
The graphics produced using the postscript device look very good. Those
generated with win.graph(), png are plagued by the jaggy lines.
So far, the only way I can use the postscript plots in my presentations is
using separate screen capture