similar to: hdf library for windows

The question puzzled me at first, because of your use of "library". It looks as if the hdf5 r "package" utilises the "windows hdf5 library" binary. My reading is that you will have to compile the package yourself after you have downloaded the hdf windows dll from hdf.ncsa.uiuc.edu The instructions are in win.readme.txt of the package source which you can download at

hello, I have a problem to open an hdf file. i have downloaded the package 'hdf5' as it was advised on R seek. But when i try to load the file, the R console sends me an eror message: setwd("C:/Documents and Settings/Karine/Bureau/data/") #install.packages('hdf5') library("hdf5") sea_ice <- hdf5load("asi-s6250-20090704-v5i.hdf", load =

Hi, RWeb web site is down past couple days, I am insterested in this project and want to try it for my projects. Deos anyone have this installation and user guide? Thanks! Best Regards, WeiQiang Li

Dear R Users, How do we read netcdf / hdf format files in R ? Also, can we convert netcdf to hdf format in R? Great Thanks, Best Regards, Yogesh [[alternative HTML version deleted]]

Dear All, I have data in HDF file format and would like to read it into R. I have tried the package hdf5 without success. Any ideas and suggestions?? Kind regards, Katrin -- Katrin Fleischer Vrije Universiteit Amsterdam Faculty of Earth and Life Sciences Subdepartment Hydrolgy and Geo-Environmental Sciences Room E-360 De Boelelaan 1085 1081 HV AMSTERDAM Tel: +31 20 59 87391

Dear R-user group I am currently running R-0.90.1-1 for LinuxPPC on my PowerBook. Few days ago I have seen at CRAN that a new R-package exists, namely R-base-with-hdf5-0.90.1-2. Sorrowly, I could not find any explanation, what the difference to the other package is. I have downloaded the "Introduction to HDF5 Release 1.2" from hdf.ncsa.uiuc.edu/HDF5. It seems that HDF5 is a data

I'm an R newbie, so please forgive if this question has been asked and answered many times before on this mailing list. I can't find anything in the manual (Notes or R), the FAQ or on CRAN, so... Has anyone implemented an interface so R can read NCSA's HDF? -- Terry J. Westley, Principal Engineer Veridian Engineering, Calspan Operations P.O. Box 400, Buffalo, NY 14225 twestley at

Hi, I've been playing with R for only a few days, so I'm not terribly familiar with it yet. Has anyone ever done any work using HDF or NetCDF files with R? Both file formats have libraries which can be linked to a program to read and write data to these formats. Is this sort of thing possible with R? We are planning to use the HDF format to store experimental data collected by some

Hi there, I am currently working on something that uses hdf5 library. I think hdf5 is a great data format, I've used it somewhat extensively in python via PyTables. I was looking for something similar to that in R. The closest I can get is this library: hdf5. While it does not work the same way as PyTables did, but it's good enough to let them exchange data via hdf5 file. There is just 1

Hi! I am trying to install in my R environment the rhdf5 package and library but it seems to have vanished from either the CRAN or BioConductors sites. Can you tell me where it would be possible to find it or any R library (or function) able to read hdf files? Sincerely, Nicolas Degallier UMR 7159 / IRD UR182 Laboratoire d'Oc?anographie et du Climat, Exp?rimentation et Approches

Hi all, I'm testing the use of the hdf5 R library under Windows XP. With some simple example (an R list with several subobjects as showed in the examples in the library) the library exports and imports .hdf files adequately. However, if I try to open the exported file with another program (HDFView 2.5) I receive the message that the file is an unsupported format. HDFView 2.5 does not seems to

Has anyone succeeded in using HDF5 in R? Using Solaris R version 0.64.0: 1) R was configured in this way: cd /home/westley/R/R-0.64.0 setenv LD_LIBRARY_PATH ${LD_LIBRARY_PATH}:/home/westley/HDF/lib ./configure \ --prefix=/home/westley/R \ --with-g77=/usr/calspan/gnu/bin/g77 \ --x-lib=/usr/openwin/lib \ --with-hdf5-libs=/home/westley/HDF/lib 2) But, when I attempt to

Hi All, I'm still actively researching this problem (reading R-ext manual), but I hoped that I might be able to get some additional insight from the list given that I'm fairly new at writing R extension code. Problem: I have some fairly simple code (.Call interface) that makes a call to another shared library, which, in turn, calls routines in an HDF5 shared library. The good news

Yes and no. Given your response it appears that "Proper Case" is not a term that everyone uses. In Excel there is a function "Proper" which in essence changes "this line into something like this" into "This Line Into Something Like This." My look at casefold seesm to be that is is a wrapper of two functions to change text into either Lower or Upper case.So

*Hi everyone, I am a new subscriber, so I hope I'm posting in the right way. I need to load a hdf5 file, so I installed the hdf5 libraries ad the hdf5 R package; in downloaded a small sample file from the hdf5 website and I could correctly load it. But when I try to load my file: * require(hdf5) rm(list=ls()) ls() hdf5load("my_file.h5", verbosity=3) *I get this error message: *

If a move toward machine-independent representation seems reasonable, it may be worth looking at some of the binary data exchange formats used by nasa and others, CDF http://nssdc.gsfc.nasa.gov/cdf/cdf_home.html netCDF http://www.unidata.ucar.edu/packages/netcdf/index.html HDF http://hdf.ncsa.uiuc.edu/ There may also be something useful in the "Scientific Data Format Information

Hello everybody, I'm using hdf5 files to store results from intermediate calculations. These are usually part of a list, called "res". As I want the hdf-files to contain all the members of res in its top "directory", I used to do attach(res) do.call("hdf5save", args=c(fileout=file.path(dir, ofile), as.list(names(res)))) detach(res) which did what I

Hi everyone, Has anyone written a parser in Java for either the ASCII or binary format produced by save()? I need to parse a single large 2D array that is structured like this: list( "32609_1" = c(-9549.39231289146, -9574.07159324482, ... ), "32610_2" = c(-6369.12526971635, -6403.99620977124, ... ), "32618_2" = c(-2138.29095689061, -2057.9229403233, ... ),

Sorry if that's a vague subject, but this problem is a little weird and I'm just wondering if there are any suggestions out there. We've got a Samba server (3.0.23) running on a CentOS 5.3 server offering up a data share of 7TB on an XFS filesystem. The authentication all happens through a Samba PDC with an LDAP backend all on a different server. The system in question is just a

Hi all -- I am working on 64-bit Windows XP. I'm not a very technical person when it comes to the command line stuff, so please forgive me if this is a stupid question. I have a bunch of HDF files, and I want to dump a single PM25 data layer from each file to .txt by invoking ncdump.exe from system(). Here's a sample command string: "C:/ncdump -v PM25 C:/01aug2010.hdf >