similar to: help with gsub and grep functions

Hi all, By default, the heatmap function gives an image with a dendrogram added to the left side and to the top. Is it possible to only add the dendrogram to the left side and let the order of the columns unchanged ? I tried heatmap(mat, col=rbg,Rowv=res.hclust$order,Colv=1:dim(mat)[[2]]). In this case, the order of the columns are unchanged but a dendrogram is added to the top. How can I

Hi all, When I start R, it gives mkdir: Ne peut cr?er le r?pertoire `/home/mart/tmp/Rtmp11729'.: No such file or directory (I specify that my home path is /home/mart and the R version is 1.7.1) How I have to configure R to use the directory /tmp instead of /home/mart/tmp ? What is utility of this directory tmp for R? Thanks, Olivier

Hi all, I want to conduct a cluster analysis with quantitative variables. More precisely, it concerns binary and non-ordered categorical variables. For such data, various similarity measures have been proposed, such as the Jaccard index or the simple matching index. So, is there a package such as mva or multiv in the case of quantitative variables? Could you indicate me reviews, papers or

Hi all, I would like to call a C program from R function. I tried to use the .C() function without success. I need a very simple example (such as the hello program) to understand how it works. Could you give a such example? (I use the 1.7.1 Version of R with linux) Does it work in the case of a C++ program instead of a C programm? Best regards, Olivier --

Hi all, I would like to save the dendrogram of a hierarchical clustering. Let reshc the result of the fucntion hclust(). To save the dendrogram, I can use the function postscript: postscript(file="hc605.ps") plot(as.dendrogram(reshc),horiz=T,ylab="",main=" ") dev.off() Using the functions plot and as.dendrogram, it is possible to obtain an horizontal tree with

Hi all, Suppose I have a vector x with numerical values. In y, I have a categorial variable : y<-c(1,1,..2,2,...30,30,30) x and y have the same length. I would like to compute the mean for x for the modality 1 to 30 in y. mean(x[y==1]),...,mean(x[y==30]) I do not want to use an iterative procedure such that for (i in 1:30).. Thanks for your help, Regards. Olivier. --

Bonjour, I'm finishing the upgrade of an old installation of Dovecot/postfix mail system for my lab. In the configuration i plan ( dovecot 2.2.27 ), i choose to use: - mdbox format - single storage for attachements - 2 zfs file systems, one for mdboxes, the other for attachments The last tests before production concern my hability to restore a lost mail (or mailbox) ... (lot of

Bonjour, It seems that freeradius 3.0.1-6.el7 of centOS 7 don't work. When doing very simple authentification (PAP control of ssh login on a switch), I get a segmentation fault when the first accounting packet arrives on the server. Does anyone test succesfully this version of freeradius ? Thanks PS: no error with the compilation of the last source version of freeradius (3.0.7) --

Hello, On a Sparcserver10 (Solaris 2.5) running samba 1.9.18p7, the following message : "Can't create or use IPC area" appears in the log.smb file, from time to time. This message in the samba source code is in the file shmem_sysv.c This server is a local master and clients can connect it. Does anybody know what it means ? --

Hello, I am using the 'regsubsets' function (from leaps package) to get the best linear models to explain 1 variable from 1 to 5 explanatory variables (exhaustive search). Is there anyone who can tell me on which criterion is based the 'regsubsets' function ? Thank you. samuel Samuel BERTRAND Doctorant Laboratoire de Biomecanique LBM - ENSAM - CNRS UMR 8005

Dear R-users, The strsplit function does not exist in S-plus and I would like to use it. How could I reproduce the function in Splus or access to its source code? Thank you in advance, Sebastien

This patch set is a follow up to "Add a vhost RPMsg API" [1], it is marked as an RFC because firstly it depends on the RPMsg API series and secondly it is currently being reviewed on ALSA and SOF mailing lists, but any early comments from virtualisation developers would be highly appreciated too! Thanks Guennadi [1]

This patch set is a follow up to "Add a vhost RPMsg API" [1], it is marked as an RFC because firstly it depends on the RPMsg API series and secondly it is currently being reviewed on ALSA and SOF mailing lists, but any early comments from virtualisation developers would be highly appreciated too! Thanks Guennadi [1]

** NOT WORKING ** This patch shows how to integrate libnbd and the glib main loop. Posted mainly as a point of discussion as it doesn't quite work yet. Rich.

Hello, I am analysing several samples whose sizes are from 9 to 110. I would like to test their distribution with R, whether they are normal or not. I wonder which test for normality from R should I use . Thank you for help. Samuel Samuel BERTRAND Doctorant Laboratoire de Biomecanique LBM - ENSAM - CNRS UMR 8005 151, bd de l'Hopital 75013 PARIS Tel. +33 (0) 1 44 24 64 53 Fax +33 (0) 1

Hello, I have an expression that I want to substitute for something else. myvector<-c("ajkhfkiuwe","Variable(kg/min)") if I use the following code to extract "variable(kg/min)" and substitute it for "va" gsub(myvector[grep("var", myvector, ignore=T)], "va", myvector) grep identifies the element of the vector that matches my

This is working now, and incorporates all of the changes in Eric's review, *except* that it still doesn't retire commands (although this seems to make no obvious difference, except possibly a performance and memory impact). Rich.

I would like to use grep and gsub to manipulate a vector to make the names used consistent, i.e. reduce a level or two. However, here is what I found when I attempted to use grep and gsub: > tmp_test<-c("House 1 Plot Plus +100","House 2 Plot Plus +100","House 3 Plot Plus -100","House 4 Plot Plus -100","House 1 Plus +100","House 2

Hi all I am analyzing bird song element sequences. I would like to know how can I get how many times a given subsequence is found in single string sequence. For example: If I have this single sequence: ABCABAABABABCAB I am looking for the subsequence "ABC". Want I need to get here is that the subsequence is found twice. Any idea how can I do this? Thanks

Hello all, here's a real-world example: I'm measuring a quantity (d) at five sites (site1 thru site5) on a silicon wafer. There is a clear site-dependence of the measured value. To find out if this is a measurement artifact I measured the wafer four times: twice in the normal position (posN), and twice rotated by 180 degrees (posR). My data looks like this (full, self-contained code at