similar to: Newbie graphing questions

Dear R-list, I'm iterating several calls to plotCI [gplots], like so: plotCI( x = xvals.f[sorted], y = yvals.f[sorted], xlim = c(xmin, xmax), ylim = c(ymin, ymax), pch = plot_symbols[graph_idx], type = "b", lty = plot_linetypes[1], col = plot_colors[graph_idx], barcol = plot_colors[graph_idx], uiw = NA, xlab = "", ylab = "", add =

Hello, has anybody written a function to plot density ellipses (95%, 99% or anything) in a scatterplot? I found nothing in any package, nor in the list archives. There does seem to be a contributed package "ellipse" for S-Plus (on S-Archive), but it does a lot more than what I would need. Still, if anybody ported it to R, I'd be grateful for a link. I'm a bit afraid to try the

Hi, so I don't speak computer and I have no idea what this code is telling the program to do, but I apparently need to be able to find and isolate influencial observations. Problem, I have no idea what the error means and where it may be from in the code. error I get is below the code { ## OLS results NameC<- lm(gpanew~female+female:lastinit+agenew+canadian+mom_ed+yearstudy) ## default:

Hi Everyone, Here's a silly newbie question. How do I remove unwanted rows from an R table? Say that I read my data as: X <- read.table("mydata.txt") and say that there are columns for age and gender. Call these X[5] and X[10], respectively. Here, X[5] is a column of positive integers and X[10] is binary valued i.e., zero (for male) and one (for female) Now, say that I

Hi There, While looking through the mailing list archive, I did not come across a simple minded example regarding the creation of dummy variables. The Gauss language provides the command "y = dummydn(x,v,p)" for creating dummy variables. Here: x = Nx1 vector of data to be broken up into dummy variables. v = Kx1 vector specifying the K-1 breakpoints p = positive integer in the range

Dear all, I have a variable called thres and before I run a script I set it to a value like thres<- -10 at the end of the execution I am issuing a save(variablename,file='Results') which will end up with a file saved at the current directory with the name Results   I would like though to use thres value and do the followingg save at the directory called 10 so to get ./10/Results, (yes I

I'm trying to compute sample size requirements for a binomial exact test. we want to show that the proportion is at least 90% assuming that it is 95%, with 80% power so any asymptotic approximations are out of the questions. I was planning on using binom.test to perform the simple test against a prespecified value, but cannot find any functions for computing sample size. do any exist?

Hi I am trying to write up a transformation for the following code where instead of incrementing the loop variable by 1, I increment it by 2 ie. for (i=0; i < THRES; *i++*) { //do something } gets transformed to for (i=0; i < THRES; *i+=2*) { //do something } I am thinking of transforming the llvm bit-code in the following way. Iterate over the function for the original code till I

How can I condition any error bar function that use the arrows() function, such as 'CI.plot' (see example below) or 'error.bars', to draw only upper error bar (upper CI) if the bar value (mean) is positive and the lower error bar (lower CI) if bar value is negative? CI.plot <- function(mean, se,length, ylim=c(-5, max(CI.H)), ...) { CI.H <- mean+se CI.L <- mean-se

Dear R list, Can anyone help with a plotting question? I'm trying to display some data on a plot and I've almost got the format I need (see code below), but 2 things I can't get: 1. How to get "Jan","Feb","Mar" on the x=axis instead of 1:3? 2. How to get "T"s on the end of my error bars like you have in standard scientific plots? Any comments

Hi, The code below is giving me this error message: Error in while (err > eps) { : missing value where TRUE/FALSE needed In addition: Warning messages: 1: In dnbinom(x, size, prob, log) : NaNs produced 2: In dnbinom(x, size, prob, log) : NaNs produced I know from the help files that for dnbinom "Invalid size or prob will result in return value NaN, with a warning", but I am not able

Dear List, I have a list of length ~1000 filled with numerics. I need to replace the elements of this list that are above a certain numerical threshold with the value of the threshold. e.g example=list(1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 9, 8, 7, 6, 5, 4, 3, 2, 1) threshold=5 <magic code goes here> example=(1, 2, 3, 4, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 4, 3, 2, 1). I have written a crude

Hi, I'm new to OOP in R so please forgive the naiveness of some of the questions. Here are a couple of them. It would be great if you can contrast to OOP in Java. 1. R's S4 appears to centered around a dispatch mechanism which in my understanding is just a way to implement polymorphism. Now, here's the snag, I thought polymorphism was an aspect of OOP not by itself the definition of

Dear R users: I have a dataset with two variables (>20000 observations, two samples from same subject) and I used "kernSur" from library(Genkern) to get a estimated bivariate density and corresponding plots as follows: new.data.normal<-data.normal[!is.na(data.normal[,2]),] x<-new.data.normal[,2] y<-new.data.normal[,3] op <- KernSur(x,y, xgridsize=50, ygridsize=50,

Hi, I want to plot grouped bars to compare 95% confidence interval estimates from two models. Each bar represents a 95% confidence interval estimate of a coefficient from one of the two models. Each group represents confidence interval estimates of the same coefficient from the two models. I think such a bar plot will nicely present whether 95% confidence interval estimates of the same

I am having trouble getting smooth-appearing curves in figures produced as windows metafiles using R (R-1.1.1 on Windows 98). When I import them into a word processor (either MS Word 97, or WordPerfect 9.0), the figures appear only slightly bumpy on screen, but when printed, there is a clear jaggedness reminiscent of aliasing. Is there a fix for this (if the answer is "upgrade to 1.2",

Hi R fans, As a newbie following the five-hour rule (after hitting my head against the wall for five hours, post to this list), I am appealing for some help understanding geom_rect() in ggplot2. What I want to do is very simple. I want to generate a plot of rectangles. Each one represents a business cycle. The x-values will be pairs representing the start and end of each cycle. The y-values

Hi List, I have a problem plotting data using the lineplot.CI command in the sciplot package. I want to plot the data of 2 experimental cases using different lines (traces). Time is on the X-axis. The tricky thing is that the data collection in the second case started later than for the first case. This is to say: the first n data points for the second case are missing. So far so good. However,

I'm trying to overlay a density plot on a previously plotted histogram. However, i need to use the same axis as of the 1st(histogram) plot to plot the second. My second plot is creating its own axis and causing my plot to extend the entire histogram instead of getting a subplot on a portion of the histogram. I tried 'fig' and 'new' parameters with no luck. Thanks in advance.

Malveeka, You can use the LoopInfo analysis to find the induction variable. http://llvm.org/docs/doxygen/html/classllvm_1_1Loop.html#a72bbf45d2e00971f56bf8cfe4e1df01c Cheers, Nadav From: llvmdev-bounces at cs.uiuc.edu [mailto:llvmdev-bounces at cs.uiuc.edu] On Behalf Of Malveeka Tewari Sent: Thursday, May 05, 2011 14:51 To: llvmdev at cs.uiuc.edu Subject: [LLVMdev] Loop transformations