similar to: Xgobi II

Dear helpers, I'm working with expression matrices (DNA microarrays) and my professor suggested me to investigate the possibilities of Xgobi. Searching the net I found that I could use it with R. Is that true? How can I do this? I'm working on a Windows ME notebook. I've already got xgobi.zip from CRAN and xgobi.zip from Professor Brian Ripley

Hi all, As far as I understood from the documentation of xgobi. The package is intended to plot data in 3D (and more). Why if I enter example(xgobi) nothing displays even though the example calls also the xgobi command (yes I did load the library)? Do I need to install anything else for xgobi to work? I use R 1.6.1. on Windows 2000 platform or R 1.5.1 with RedHat 7.3 (none works). Miha

Hi Folks, I'm at the point where I'd normally install xgobi (which I've used and found very useful), but there is the alternative of ggobi (now at version 0.9). Would anyone with experience of both care to indicate the merits of either relative to the other? The other thing I can't make out too clearly from the ggobu website is quite what's involved in choosing between the

> From: Ko-Kang at xtra.co.nz > Date: Mon, 5 Mar 2001 23:25:00 +1300 > > This might be better discussed on the ggobi help list, but I failed to > > subscribe to that as mail to ggobi.org is refused .... > > Yes I tried to subscribe to the list a few weeks ago and it refused my > subsription somehow... I think if you use ggobi-help-request at franz.stat.wisc.edu it

Hi, I followed the following sequence of commands after installing 'XGobi': >library(xgobi); >data(ToothGrowth); >xgobi(ToothGrowth); I got the following warning message: C:/R13 1.0/rw1030/library/xgobi/scripts/xgobi.bat -vtitle 'ToothGrowth' -std mmx C:/DOCUME~1/h1452992/LOCALS 1/Temp/xgobi-TthGr5705 Warning message: argument `pkg' is deprecated. Use

Hi, When I tried an example of the xgobi function, I got the following error. Could someone explain to me what is wrong ? Thanks a lot. xgobi(crabs,colors=c("SkyBlue","SlateBlue","Orange","Red")[rep(1:4,each=50)]) c:/PROGRA~1/R/R-23~1.1/library/xgobi/scripts/xgobi.bat -vtitle 'crabs' -std mmx

Hi I made a 3d plot with scatterplot3d, but I would like to rotate it to achieve the best view of the data. Is this possible? Thanks a lot Luis -------------------------------------------- sapo.pt/kitadsl -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info",

Hi, I have tried to develop multidimensional scaling for 3D space using PCA without success, yet;-) Is there some application ready in R? Cheers, Atte

Is there any graphical frontend/secondary programm (freely availible for Windowsor Linux) which can be used with R to display the results of a principle component analysis in 3D space (rotatable!?)? It works with Spotfire, but is there any freely or cheaply availible programm? -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

Hi, I am doing my way on R, with much experimenting. So, I am trying to plot a 3d graphic ussing "persp" and entering a data set (attached) of UTM coordinates as x,y and a pH values as z. However when I try an error message comes out telling that increasing x and y values are expected. Jus ordering the first vector does not help, and, of course, order the first two independently

I have been trying to get Xgobi to work with the function xgobi( ), but I keep on getting the message ""Xgobi requires a filename or some data from stdin" in the DOS-shell. My Xgobi.bat file is : @echo off PATH=c:\windows\ set DISPLAY=195.23.18.11:0.0 set XGOBIDIR=c:/Xgobi3 c:\Xgobi3\xgobi.exe In R I get: > xgobi(D1) C:\RW0642/library/xgobi/scripts/xgobi.bat -vtitle

i just installed the xgobi interrface, and this is what i get when i try to run the example things don't work > xgobi(laser) xgobi -title 'laser' -std mmx -dev 2 /tmp/unixR3e07S15fb & > Neither the file 2 nor 2.dat exists what am i doing wrong? p.s.: xgobi is installed and works -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help

Hi, Just started with exploring R. Nice ! (for many years using Splus). I tried to install and activate the package xgobi. - first download of xgobi.zip - then the R-command to install: install.packages('N:\\d024\\xgobi.zip',CRAN=NULL) - finally the command to attach the library: library(xgobi) Up to now, everything seemed to work. Also the help. No warnings that the

Dear all, first, I would like to thank R-core team for making so a great software available. Thank you all, really! Using R (1.0.0) on a Win98 platform, I need an x-server to run xgobi (through R xgobi interface). I've been using a MI/X server but trying to upgrade I noticed that MI/X is no longer available for free. Similarly, eXceed is available at evaluation version (for a limited time

Hi again, Thanks for the tips on Xgobi. I'll try them. Now I have another question. There is a package (not submitted to CRAN yet), that I would like to use, but it has the extension .tar, so it's for Linux platforms am I rigth? Is it possible from those files to compile for Windows? Nice weekend for all Luis -------------------------------------------- sapo.pt/kitadsl

I can't ssem to get the the examples running. Can anyone offer a solution? Thanks in advance, and this what happens. > data(laser) > xgobi(laser) xgobi -title 'laser' -std mmx /tmp/xgobi-laserR7316S41c6 & > Neither the file /tmp/xgobi-laserR7316S41c6 nor /tmp/xgobi-laserR7316S41c6.dat exists -------------- next part -------------- A non-text attachment was scrubbed...

Dear R-Developers and -Community, after compiling and installing R 1.2.2., I started 'demo(graphics)' for a test, and got: 'Error in rnorm(0): .Random.seed(0) is not a Normal type' Obviously .Random.seed was not initialized appropriately. Following the the documentation for '.Random.seed' [see below 'Examples'], this can be fixed rm(.Random.seed);

A few days ago I loaded R version 1.4.1 to run on Windows 98 and haven't been able to find information on the GUI approach in the FAQs, R Reference Index, or Search Engine . Edit has an item that allows changing GUI preferences, and the Target path in the icon ends in Rgui.exe, so it appears that R for Windows does include using the GUI approach. In S-Plus I wrote a application with

I've seen XGobi come up in here from time to time, and I wonder what is it, what is it for, do I need it? How about throwing me a bone here! -- Paul E. Johnson email: pauljohn at ukans.edu Dept. of Political Science http://lark.cc.ukans.edu/~pauljohn University of Kansas Office: (785) 864-9086 Lawrence, Kansas 66045 FAX: (785)

I have found XLispStat's spinning plots illuminating. I'd like to do the same thing in R. A dozen or so probes with help, help.search, apropos haven't turned up anything, and I've even resorted to grepping through the entire R source distribution looking for 'spin.*plot', to no avail. Either the feature is called something else in R (what?), or it's in some other