similar to: Line plot with 3 points

Hi, I am having troubles with creating an eSet and would appreciate any help on the following problem. I am trying to create an eSet using the following code pd <- read.table(file="pdata.txt",header =TRUE,row.names=1); colnames(pd) <- c("type","tumor","time","id"); pdN <- list(type =

I am trying to run a lme model and some contrast for a matrix . lnY [1] 10.911628 11.198557 11.316971 11.464869 11.575233 11.612101 11.755903 11.722035 11.757705 11.863744 11.846515 11.852721 11.866936 11.838452 11.946680 11.885509 [17] 11.583309 11.750082 11.756005 11.630797 11.705536 11.566722 11.679448 11.703521 NA 11.570949 11.716919 11.573343 11.733770 11.720801 11.804124 11.775074

Hello all! I am currently trying to sort a data frame in a particular way, but I am having some difficulties with this. Specifically I want to sort the below dataset in such a way that there is only one line per ProteinID and if there are multiple GeneID or GeneName entries for a single proteinID, that they be concatenated with a comma separating them. The way I have done it earlier worked fine

Hi, maybe someone can help me with this: I have a matrix of genes and values: GeneName Value Abc1 10 Abc2 11 Bbc1 -5 Bbc31 2 Ccd 5 Ccd -2 Ccd 7 Dda 5 Dda 10 ..... ..... Zzz3 -1 I would like to

Dear R-Helpers, I have a data.frame (df) and the head of data.frame looks like ProbeUID ControlType ProbeName GeneName SystematicName 1665 1577 0 pSysX_50_22_1 pSysX_50 pSysX_50 5422 5147 0 pSysX_49_8_1 pSysX_49 pSysX_49 4042 3843 0 pSysX_51_18_1 pSysX_51 pSysX_51 3646 3466 0 sll1514_0_2 sll1514 sll1514

Dear Sir/Madam, I found your email address and your correspondence with R-users. I hope you could help me with this question about the function "ur.ers" in the package of "urca". It is an improved unit root test (Elliott et al. 1996 Econometrica). Do you know how to extract the value of the test statistic from the output? The only thing I can get is the print-out of all

Dear R experts, Sorry, I am resending this, since I have not received this mail myself for the past 5 hours. I saw a similar question dated July 2. But there is no answer to it. Does anybody have a solution to it? I am using window NT, and the R version is 1.5.1, the SJava package is the binary version SJavaWin_0.62-8.zip. Here are the error message: > library(SJava) > .JavaInit()

Hi all, My name is Amy, I am a masters student in Bioinformatics at North Carolina State University. I am working on a project and I am trying to use the lumi R package for microarray data analysis. I have shown the sample code here and have questions about modifying the sample code for my own data. lumi package in R, example.lumi, the sample data has 8000 features and 4 samples I have

Folks, Having problems getting started with SJava and request help. I get this error when running .JavaInit() (within RGui 1.5.1, on Windows 2000): Error in .JavaInit() : Couldn't start Java Virtual Machine: Cannot find the Omegahat interface manager class. Check you classpath! (Before you right back saying read the emails, please read further - in short, been there, done that)

Dear R experts, I posted a question last week regarding RSJava error UnsatisfiedLink: eval. But, I did not get any response yet. So, I am trying to work something out. I tried to write something with perl, but it still does not work. In perl, when I used rename which is a Dos command, it worked through the cgi, so did cp (which is not a Dos command, but, it is in my path). And the perl

The gregmisc package contains a function 'perumutations' which generates all permutations of n choose r. It also contains 'combinations' which generates all combinations, and which appears to match your example: > library(gregmisc) Loading required package: MASS Attaching package `gregmisc': The following object(s) are masked from package:base :

My full backup script errorred out the last two times I ran it. I''ve got a full Bash trace of it, so I know exactly what was done. There are a moderate number of snapshots on the zp1 pool, and I''m intending to replicate the whole thing into the backup pool. After housekeeping, I take make a current snapshot on the data pool (zp1). Since this is a new full backup, I then

Hi, I'm stumped. How can I do ftell and fseek in R? (Where ftell gives the position in the file and fseek points the file pointer to a given position.) Thanks, Pauline -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or

Hi, Not sure how to go about checking for missing report pages per client. See example below; I like to extract client 730040, because page 46103 is missing. client page 730001 46101 730001 46102 730019 46101 730035 46101 730040 46101 730040 46102 730040 46104 730040 46105 730052 46101 730052 46102 730074 46101 730074 46102 730074 46103 I appreciate any help, Pauline

Can anybody recommend an ISDN2e card that is a reasonable price. Also, does anybody know if the AVM B1 V4 card has the echo problems, I believe I saw somebody mention they had echo problems on the V3 card. Thanks -------------- next part -------------- An HTML attachment was scrubbed... URL: http://lists.digium.com/pipermail/asterisk-users/attachments/20030507/c7cc9e15/attachment.htm

What is this? chan_iax2.c line 4695 (build_peer): Unable to support trunking on peer 'lamas-tigris' without zaptel timing codec_g729b.c Line 413 (load_module): Unable to initialize va stuff: -1 This is why I can't start asterisk in the background -------------- next part -------------- An HTML attachment was scrubbed... URL:

Dear all, I am a total beginner in R, so sorry if this is the wrong place. I am using R 2.10.1 on a Mac (Mac OS 10.6.2). I have this small dataset : growth sugar 75 C 72 C 73 C 61 F 67 F 64 F 62 S 63 S I have no problem reading the table, or getting the summary, but if I try boxplot(growth~sugar, ylab="growth", xlab="sugar", data=Dataset), I have the following error :

To whom it might concern, The Gesko Ikarus 1200S analog telephone has advanced callerid capabilities. When used with an ATA186, it show the username and the phonenumber of the caller. (or whatever you let * tell it) http://www.gesko.be/idgg004.htm Price is 77 euro something and available with Telec. (NL) Met vriendelijke groet, Pauline Middelink -- GPG Key fingerprint = 2D5B 87A7

Hello, I'm a beginner on R. I should create a package on R. The name of my package is SGeMS. In my package, I have a big program writed in C++. This program compiles in C++. I put this program in SGeMS/src. In my program, I added a header file and a source file named respectively CreateFile.h and CreateFile.cpp. CreateFile contains 5 functions : File, FileGeneral, FileData, FileVariogram and

hello, please where i can get channel modem dsp patch - for correct use with i4l and patch to solve problem when the calling party can hear voices from last call, for a little moment regards Marian -- SUNTEQ s. r. o. Bojnicka cesta 35 # Prievidza # 971 04 # Slovak republic Tel: +421-46-5430 754 # Fax: +421-46-5439 144 http://www.sunteq.sk/