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Hi, I had some Java code that worked with SJava 0.65 under R 1.8.*. I'm trying to get it to work with R 2.0.0. My JVM is Sun 1.5.0 (running on Fedora Core 2) I downloaded and installed SJava 0.65 in my personal directory using R CMD INSTALL SJava-0.65.tar.gz -l ~/src/Rlibrary and before starting R I sourced RJava.bsh. However after loading the SJava library if do javaConfig() I get

I am running R-1.81, apple's JVM installed with OS 10.3.2, and installed Sjava-0.65.X (a patched version of Sjava for MacOS from Simon Urbanek, which I know is inherently dangerous, but...). This version installed fine and some aspects seem to work as expected. However, this is one of the examples and causes R to hang. Any insights? What other information should I provide to make it easier

Dear R users, I was happy to find a binary library for SJava in the last released of R (1.5.1)... I am able to load the library... but I have some problems to run this library: > .JavaInit() Error in .JavaInit() : Couldn't start Java Virtual Machine: Can't create Java Virtual Machine > javaConfig() $classPath [1] "F:/Program

Sorry for this off-topic subject. I am fighting for running SJava under Windows. SJava_0.64 (compiled by Simon Urbanek, thanks), R 1.6.2, Java JDK 1.4.0_02, Windows XP pro: > library(SJava) > .JavaInit() Error in .JavaInit() : Couldn't start Java Virtual Machine: Cannot find the Omegahat interface manager class. Check you classpath! > # And the second time... > .JavaInit() It

Dear All, <<OS and software>> R-1.81 j2sdk1.4.0_03 SJava_0.66-1 Windows NT4.01 I try to run R from Java with SJava and I seem to have the same problem as discussed before in this mail list a few month ago: https://www.stat.math.ethz.ch/pipermail/r-help/2003-May/031960.html https://www.stat.math.ethz.ch/pipermail/r-help/2003-May/031962.html

Hi,all, I have a problem about launching SJava in R from external application (Cytoscape). My R version is 2.1.0 and Sjava version is 0.68. R is installed by issuing 1. configure --enable-R-shlib 2. make 3. make check 4. make install SJava is installed by issuing "R CMD INSTALL -c SJava_version_.tar.gz". The LD_LIBRARY_PATH is set in .bash_profile by

Does SJava require that omegahat be installed? I have installed the binary Windows package (SJavaWin_0.62-8.zip), made the change eliminating the call to .alias(), with the following results on startup: > library(SJava) > .JavaInit() Error in .JavaInit() : Couldn't start Java Virtual Machine: Cannot find the Omegahat interface manager class. Check you classpath! > tmp <-

Thanks for Professor Ripley and Brad's reply. UnsatisfiedLinkError: SJava.dll is gone. But, I have another problem. I have been trying to figure out, but, without success. Here is my test.java: import java.io.*; import org.omegahat.R.Java.REvaluator; public class test { public static void main(String args[]) { System.out.println("Hello...");

Hello, Seems like it is almost working properly. I was able to run examples calling R from Java successfully for the java code below. However, some commands, such as "objects" when not commented out, give me the following error? If you could point me to the correct place to find a solution, I would much appreciate it. I am new to the R community and not sure where is the appropriate

Dear R experts, Sorry, I am resending this, since I have not received this mail myself for the past 5 hours. I saw a similar question dated July 2. But there is no answer to it. Does anybody have a solution to it? I am using window NT, and the R version is 1.5.1, the SJava package is the binary version SJavaWin_0.62-8.zip. Here are the error message: > library(SJava) > .JavaInit()

Dear Any, I am trying to initialise Rjava with the objective of running ORCA within R. I am running R1.5.1 on Windows2000 and get the same problem with Sun Java run time jre-1.2.2_013 Java j2re-1.4.1_01 Microsoft Java Virtual Machine Build 3805 .JavaInit() is failing at : .C("s_start_VM", as.character(classPath), as.character(classPath),

Hi, I installed SJava 0.66-1 on my linux RH 7.2 machine. I am using R-1.7.1. I set LD_LIBRARY_PATH up then called library(SJava) and it was fine. But when I called .JavaInit(), I got weird error that states it could not find java/lang/Hashtable. The session is below and shows my java configuration. I am using j2sdk1.4.2_01 from Sun. Thank you very much. Weiming Zhang > .javaConfig

Hi, I am trying to run the example "JavaRCall" with SJava 0.65 and R1.5.1 under Windows NT4.0. Although loadLibrary("RInterpreter") worked successfull, the following error occurs: "Exception breakpoint occurred at line 65 of ROmegahatInterpreter.java. java.lang.UnsatisfiedLinkError: boolean org.omegahat.R.Java.ROmegahatInterpreter.initR(java.lang.String[]) boolean

Apologies, I am a non-techie so am finding installing SJava (which I need for RMAGEML) very frustrating indeed. I am running rw2001 on WindowsXP with Java - jre1.5.0_02. Could somebody please explain to me step-by-step how to install it as I have tried all the help files. The website’s (HYPERLINK "http://www.omegahat.org/RSJava/"http://www.omegahat.org/RSJava/) instructions for

Hi. I have downloaded SJava from http://www.omegahat.org/RSJava/ as well as all of the tools required. I have done exactly what is said on that page as well as http://www.murdoch-sutherland.com/Rtools/Rtools.txt. When I type: make pkg-SJava It seems like it IS installing but then i get the following error: ... extracted: org/omegahat/Environment/Help/Interpreter.html extracted:

org.omegahat.R.Java.REvaluator e = new org.omegahat.R.Java.REvaluator(); Object val = e.eval("objects()"); if(val != null) { String[] objects = (String[])val; for(int i = 0 ; i < objects.length; i++) System.err.println("("+i+") " + objects[i]); } hello, thanks to Philippe Grosjean's work I finally got SJava working (on Windows XP!!), so that I can

Hi, I'm try to use the SJava package. The install is OK. In R I have this error message: -------------------------- > library(SJava) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/opt/lib/R/site-library/SJava/libs/SJava.so": libRSNativeJava.so: cannot open shared object file: No such file or directory Error in

using ./RJava --example --gui-none to invoke t.test core dumps. The line of R works if I go directly thru R and not RJava. Version info and code are below. Any help would be appreciated. --Laura O'Brien Applications Architect Version info ------------ Java: jdk1.5.0_03 R: 2.1.1 SJava: 0.68 OS: SunOs 5.8 example code that works ----------------------- [omegahat->R] mean (c

Hi, Here's some suggestions for troubleshooting the install. The CLASSPATH needs to be $SJAVA_HOME/org/omegahat/Jars/Environment.jar, $SJAVA_HOME/org/omegahat/Jars/antlr.jar $SJAVA_HOME/org/omegahat/Jars/jas.jar $SJAVA_HOME. This allows the java compiler/interpreter to find 1)the ROmegahatInterpreter and REvaluator classes(in a org/omegahat/R/Java tree under SJava 2)& the

OS : Win95 R Version : 1.4.0 JDK Version : 1.3.0 Hi, R-statisticians all over the world. I'm trying to handling R objects in the Java code as follows: [c:\myjava\R2JTest.java] import org.omegahat.R.Java.*; class R2JTest { public static void main(String args[]) { REvaluator e = new REvaluator(); Object val = e.eval("objects()"); int i;