similar to: Will R run in Batch mode?

Dear all, In R<=1.6.2 I usually used the following code (in DOS prompt) to run R in batch mode C:\documents> Rcmd BATCH myfile.R and I could see the results (including warning messages) in the file myfile.Rout In R.1.7.0 I'm experiencing the followings: (1) even if I type "Rcmd BATCH myfile.R myfile.Rout", no file myfile.Rout is created, but just a "&1" file

Hi, I was trying to use the batch mode "rcmd" under Windows NT. The online help says the right command should be "Rcmd BATCH [options] infile [outfile]". But when I type "rcmd BATCH aaa.r" I got message of "The name specified is not recognized as an internal or external command, operable program or batch file." What is wrong? I know this is a quite

I have written a batch file I thought would run in R (for Windows, 1.5.1), but as the documentation suggests, R is different in how it handles BATCH from S-Plus (i.e. not directly equivalent to "Splus BATCH infile outfile errfile"). If the file consists of a list of valid R commands, what's the best way of automating it? Many thanks. STS

Greetings All, Just a quick query about calling R. Looking through the manual you start R with $ R, and then start calling R functions e.g plot whatever. Sounds pretty funky, and R looks to be *the* open source maths package. Awesome ... I would like to call R from my favourite glue language PHP (rather than call perl which calls R) if possible. To call R from the command line is all this

Hello to everybody! I want to run R in batch mode but it doen't work (Error: syntax error) I've found this in R help: R CMD BATCH [options] infile [outfile] I have tried differents commands: (I have been working in the same directory I have "test.txt" file and "test2.txt" would be the output file) > R CMD BATCH "test.txt" or > R CMD BATCH

R Team: This is most likely a trivial question, but after searching docs for several weeks and digging through Rweb and RCGI, I could not clearly identify the method to call an R method from Linux or Win32 systems and send the output to a file. I would like to implement R as part of an online client-server application for a geographically spaced engineering team an would like to know how to run

Hi, I'm trying to execute R-script from Python. I'm using R 2.7.2, Python 2.5 and WinXP. I don't won't to use Python/R interface because of nature of project. Python code : import subprocess command = 'c:\\Program Files\\R\\R-2.7.2\\bin\\Rterm.exe --vanilla -q <d:\\test\\run\\geneBank.r> d:\\output.out' subprocess.Popen(command).wait() After that, I get error

I'm trying to learn how to use R version 1.1.0 under Mandrake Linux version 6.1. Using R interactively, I get good results. However, when I attempt to execute commands from a file (following the directions in section 1.10 of An Introduction to R, version 1.10) my output disappears. As a default or after a sink() command, I would expect to see output on the console, but none appears. After

In a few of my test scripts for the survival code I expect warning messages (I actually try to trigger a couple). Using R BATCH infile outfile these messages don't end up in outfile, where I can compare them to what was expected. I don't see an option to change this. R < infile >& outfile works. But is there a way to get it to continue on after errors? Terry T.

Posted on behalf of chenwj <stop4optimal at hotmail.com> who is having trouble posting. hi all, I'm completely new in R, and here are my questions (under windows): 1. i want to run my four R files (pl1.r -- pl4.r) in batch mode. i'd like to write a batch file using Rterm.exe, since i dont get perl installed on my computer. My experimental batch file (*.bat) didnt work, which

Hi Community, I have a question about how to pass command line parameters to R script running in the batch mode. The problem is: there is a banch of data files which are to be processed by R script called from a web-server, i.e. in the batch mode. The web server generates data files and passes their names calling 'R CMD BATCH' one by one for every file. Now the question is how to

When I submit more than one batch file (same programs, different parameter values, huge simulations, different result names) the only results that get saved are from the *last* batch file to finish. They are all being run in the same subdirectory (so same .RData file?) I've done: R --save BATCH infile outfile and I've also put q(save="yes") at the end of the program, but

Hi, I have a set of script like this: ---------------------- summary(data) plot(time, users, type="o", xlab ="Time", ylab="Number of Users") ---------------------- I type "rterm --slave < script.r > output.doc" and the graphic doesn't actually in the output.doc file. How to make the graphic embedded in Word or Excel file? Thanks, Yu-Ling Wu

Hello R-people, I have the following problem : In order to run R script from DOS prompt in BATCH mode and pass it some parameters I do the following : Rterm --slave --no-save --no-restore <args.R> args.out ARG1=1 ARG2=2 It works fine : the result is that the script args.R is isexecuted. Sys.getenv() sees the arguments ARG1 and ARG2, and the R creates output file args.out Now I want

Does R have the ability run in batch mode as described in the S New 'blue book'? Richard -- Richard Lammers Phone: (603) 862-4699 Complex System Research Center Fax: (603) 862-0188 University of New Hampshire email: Richard.Lammers at unh.edu Durham, NH 03824 (USA) URL: TBA

Hi, I have researched batch mode for windows and could not find anything that worked. I know the code should be $ R CMD BATCH inputfile.R outputfile.Rout or R <inputfile.R > outputfile.Rout I tried these without success. I need detailed, step by step instructions on how to do this. I have tried typing C:\R\bin\x64\Rgui.exe before it, but this just opens R. When I tried to do this, it

Apologies for asking about this, but I don't quite understand how this works after looking through the FAQ and the Help archives. Let's say I want to pass "1000" as an argument to R. I did the following: >R CMD BATCH --1000 infile outfile When I do print( commandArgs() ), I see [1] ".../R.bin" "--restore" [3] "--save"

Hello, I''ve a question: I invoke R from a text editor in a Win2000 operating system using Rcmd.exe BATCH inFile outFile I''ve two problems: a) If I use windows() as graphics device, all windows close immediately after script execution, how can I let them not to die? b) Is it possible to redirect the content of outFile to the console output? Many thanks. Paolo

I have made many different attempts to run a R program in Batch mode. I run a DOS command like: C:\Progra~1\R\rw1061\bin\rterm.exe -q --no-restore --no-save myprogram.R out.txt What happens: 1. DOS Shell starts up well 2. R starts 3. I get the messages: "ARGUMENT 'myprogram.R' __ignored__" "ARGUMENT 'out.txt' __ignored__" 4. R Shell is ready to

below is a very simple bash script to run Sweave from a cygwin terminal, run pdflatex on the generated .tex file, and then view the resulting .pdf output. i usually use cygwin when i am (forced to be on) Windoze, but i found a few issues with paths that this script works around. pdfview, used in the script, is simply: