Displaying 20 results from an estimated 500 matches similar to: "Passing a string variable to Surv"
2010 Nov 09
2
Help with Iterator
Dear Experts,
The following is my "Iterator". When I try to write a new function with
itel, I got error.
This is what I have:
> supDist<-function(x,y) return(max(abs(x-y)))
>
> myIterator <- function(xinit,f,data=NULL,eps=1e-6,itmax=5,verbose=FALSE) {
+ xold<-xinit
+ itel<-0
+ repeat {
+ xnew<-f(xold,data)
+ if (verbose) {
+ cat(
+
2007 Jan 26
2
Using functions within functions (environment problems)
Hi everyone,
I've been having difficulty writing wrapper functions for some
functions where those same functions include other functions with
eval()
calls where the environment is specified. A very simple example using
function lmer from lme4:
lmerWrapper <- function(formula, data, family = gaussian, method =
c("REML",
"ML", "PQL", "Laplace",
2006 Jan 26
2
Prediction when using orthogonal polynomials in regression
Folks,
I'm doing fine with using orthogonal polynomials in a regression context:
# We will deal with noisy data from the d.g.p. y = sin(x) + e
x <- seq(0, 3.141592654, length.out=20)
y <- sin(x) + 0.1*rnorm(10)
d <- lm(y ~ poly(x, 4))
plot(x, y, type="l"); lines(x, d$fitted.values, col="blue") # Fits great!
all.equal(as.numeric(d$coefficients[1] + m
2007 Jul 22
1
Package design, placement of legacy functions
I have a function XOLD() from a nearly verbatim port of legacy
FORTRAN in a package. I have remplemented this function as XNEW()
using much cleaner native R and built-in functions of R. I have
switched the package to the XNEW(), but for historical reasons would
like to retain the XOLD() somewhere in the package directory
structure. An assertion through a README or other will point to
2005 Oct 04
3
Problem reading in external data and assigning data.frames within R
Hey there,
I apologize if this is an irritatingly simple question ... I'm a
new user. I can't understand why R flips the sign of all data values
when reading in external text files (tab delimited or csv) with the
read.delim or read.csv functions. The signs of data values also seem
to be flipped after assigning a new data.frame from within R (xnew <--
edit(data.frame()). What am
2005 Sep 06
2
Predicting responses using ace
Hello everybody,
I'm a new user of R and I'm working right now with the ACE function
from the acepack library. I Have a question: Is there a way to predict
new responses using ACE? What I mean is doing something similar to the
following code that uses PPR (Projection Pursuit Regression):
library(MASS)
x <- runif(20, 0, 1)
xnew <- runif(2000, 0, 1)
y <- sin(x)
a <- ppr(x, y,
2010 Nov 18
3
sweep by levels of a factor
Hi,
I'd appreciate help with this. I have a data matrix with one column, called
f in the example below, a factor. I'd like to subtract the means from each
of
other columns for each level of the factor. That is, in the example, to go
from the first matrix below to the second. I know SWEEP will take out means,
but I want to do this for each level of the factor.
f x
1 2
1
2005 Feb 13
2
row equality.
I think that this is an easy one...
I have a matrix where each row is an (x,y,z) triplet. Given a potential
(xnew,ynew,znew) triplet I want to know if the matrix already contains a
row with the new values (the space already has that point). I can do it
using a for loop, but I would like to know if there is anyway in which I
can do it without the for loop.
I do it now like this (this
2006 Aug 17
2
getting sapply to skip columns with non-numeric data?
getting s-apply to skip columns with non-numeric data?
I have a dataframe ?x? of w columns.
Some columns are numeric, some are not.
I wish to create a function to calculate the mean and
standard deviation of each numeric column, and then
?bind? the column mean and standard deviation to the
bottom of the dataframe.
e.g.
tempmean <- apply(data.frame(x), 2, mean, na.rm = T)
xnew <-
2011 Jun 14
2
Need script to create new waypoint
Dear help-list members,
I am a student at Durham University (UK) conducting a PhD on spatial representation in baboons. Currently, I'm analysing the effect of sampling interval on home range calculations.
I have followed the baboons for 234 days in the field, each day is represented by about 1000 waypoints (x,y coordinates) recorded at irregular time intervals. Consecutive waypoints in
2012 Jul 02
0
Fit circle with R
Dear Researchers,
I wrote two function to fit a circle using noisy data.
1- the fitCircle() is derived from MATLAB code of * zhak Bucher* from the
link
http://www.mathworks.com/matlabcentral/fileexchange/5557-circle-fit/content/circfit.m
2- the CircleFitByPratt() from MATLAB code of *Nikolai Chernov *from the
link
2009 Feb 03
1
Collapsing panel data
Dear R-helpers,
I've been thinking about this for some time, maybe someone can help. I have
a fairly large dataset with thousands of firms, call the a, b, c, etc..
such as
[,1] [,2]
[1,] "A" 0.5
[2,] "" 0.2
[3,] "" 0.3
[4,] "B" 0.1
[5,] "" 0.9
[6,] "C" 0.4
Or to put it differently two vectors such as
y
2008 Jul 22
1
help with simulate AR(1) data
Hi, sorry for bothering your guys again.
I want to simulate 100 AR(1) data with cor(x_t, x_t-1)=rho=0.3. The mean of
the first 70 data (x_1 to x_70) is 0 and the mean of the last 30 data (x_71
to x_100) is 2. Can I do it in the following way?
x <- arima.sim(list=(ar=0.3), 100)
mean <- c(rep(0, 70), rep(2, 30))
xnew <- x+mean
If the above code to simulate 100 AR(1) data is right, what
2011 Feb 15
2
Count factor if
Hi,
I have a data frame containing two columns:
x<-as.factor(c('a','a','a','a','a','b','b','b','c','d','d','d'))
y<-c(1,3,6,8,12,3,4,7,5,6,7,10)
X<-data.frame(x,y)
X
x y
1 a 1
2 a 3
3 a 6
4 a 8
5 a 12
6 b 3
7 b 4
8 b 7
9 c 5
10 d 6
11 d 7
12 d 10
I would like to
2013 Oct 31
1
Extracting values from a ecdf (empirical cumulative distribution function) curve
Hi R users,
I am a new user, still learning basics of R. Is there anyway to extract y
(or x) value for a known x (or y) value from ecdf (empirical cumulative
distribution function) curve?
Thanks in advance.
Mano.
[[alternative HTML version deleted]]
2011 Jun 21
5
omitting columns from a data frame
Dear R People:
I have a data frame, xm1, which has 12 rows and 4 columns.
If I put is xm1[,-4], I get all rows, and columns 1 - 3, which is as
it should be.
Now, is there a way to use the names of the columns to omit them, please?
Thanks so much in advance!
Sincerely,
Erin
--
Erin Hodgess
Associate Professor
Department of Computer and Mathematical Sciences
University of Houston - Downtown
2017 Jul 16
3
Arranging column data to create plots
Dear All,
I need some help arranging data that was imported.
The imported data frame looks something like this (the actual file is huge, so this is example data)
DF:
IDKey X1 Y1 X2 Y2 X3 Y3 X4 Y4
Name1 21 15 25 10
Name2 15 18 35 24 27 45
Name3 17 21 30 22 15 40 32 55
I would like to create a new data frame with the following
NewDF:
IDKey X Y
Name1 21 15
Name1
2006 Jan 20
3
Selecting data frame components by name - do you know a shorter way?
Hi! I suspect there must be an easy way to access components of a data frame by name, i.e. the input should look like "name1 name2 name3 ..." and the output be a data frame of those components with the corresponding names. I ´ve been trying for hours, but only found the long way to do it (which is not feasible, since I have lots of components to select):
2017 Jul 16
0
Arranging column data to create plots
On Sat, 15 Jul 2017, Michael Reed via R-help wrote:
> Dear All,
>
> I need some help arranging data that was imported.
It would be helpful if you were to use dput to give us the sample data
since you say you have already imported it.
> The imported data frame looks something like this (the actual file is
> huge, so this is example data)
>
> DF:
> IDKey X1 Y1 X2 Y2
2010 Apr 22
1
Convert character string to top levels + NAN
Dear all,
I have several character strings with a high number of different levels.
unique(x) gives me values in the range of 100-200.
This creates problems as I would like to use them as predictors in a coxph
model.
I therefore would like to convert each of these strings to a new string
(x_new).
x_new should be equal to x for the top n categories (i.e. the top n levels
with the highest