similar to: Anyone use pls package?

I've managed to find how to change trellis.settings$box.rectangle$col and trellis.settings$box.umbrella$col but I can't figure out how to change the colour of the point used to indicate outliers. There doesn't seem to be a general colour. What am I overlooking? best -- ************************************************************* ___ Patrick Connolly {~._.~}

To compare two different models, I've compared the result of using dropterm() on both. Single term deletions Model: growth ~ days + I(days^0.5) Df Sum of Sq RSS AIC <none> 2.8750 -0.2290 days 1 4.8594 7.7344 4.6984 I(days^0.5) 1 0.0234 2.8984 -2.1722 AND Single term deletions Model: growth ~ days + I(days^2) Df Sum

platform i586-pc-linux-gnu arch i586 os linux-gnu system i586, linux-gnu status major 1 minor 4.1 year 2002 month 01 day 30 language R I can't seem to get rid of the slightly green background when I use dotplot(). It shows on the screen in the

My data has three factors, a discrete response and an offset column. >From the summary of a glm object derived using three way interactions, I get this deviance information: (Dispersion parameter for poisson family taken to be 1) Null deviance: 39244 on 896 degrees of freedom Residual deviance: 11913 on 795 degrees of freedom AIC: 13905 Number of Fisher Scoring iterations: 6 The

To use grid graphics with lattice, the help for gpar indicates that any number of named arguments can be specified but where do we find what names make any sense? I have ascertained that fontsize is given in points such as one would use in a postscript device argument and uses that same name. It's not as I'd have thought, something corresponding to cex in regular par() settings.

Dear, Thanks for your help. My question is the title can not completely show in the drawing area when the title is too long. So, I need to change the value of cex.main each time. Could you help me to control the title display area? Regrad, ken -----Original Message----- From: Patrick Connolly [mailto:p.connolly at hortresearch.co.nz] Sent: Wednesday, September 11, 2002 4:41 AM To: Ken

Hi, Now suppose I have just one list called FOO, which has 25 objects, e.g.: [[1]] 1 2 3 4 5 [[2]] 6 7 8 9 10 . . . And I want to do something like: FRED <- data.frame(cbind(unlist(FOO[[1]]), unlist(FOO[[2]]), # ... for all 25 subsets )) Is it possible to do this, without doing unlist(FOO[[i]]) 25

Using anova of a glm with test = "Chisq", I get this: Analysis of Deviance Table Model: poisson, link: log Response: Days Terms added sequentially (first to last) Df Deviance Resid. Df Resid. Dev P(>|Chi|) NULL 373 370.56 Block 3 71.05 370 299.51 2.543e-15 Variety 1 94.04 369

I investigated why I was getting this error message... Error in Ops.factor(groups[subscripts], vals[1]) : Level sets of factors are different which led me to putting a browser in panel.superpose: Called from: panel.superpose(x, y, subscripts, ...) Browse[1]> vals vals [1] 1 2 3 Levels: 1 2 3 Browse[1]> groups[subscripts] groups[subscripts] [1] 1 2 3 1 2 1 2 3 1 2 3 1 2 3 Levels: 1 2

I see that adj is not a graphical parameter that can be used in a key list to use with lattice functions. Is that because it's not yet implemented in gpar? If so, it could also explain why it's not available in grid.text. Is there a work around? Centering looks silly on my plot. best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

platform i686-pc-linux-gnu arch i686 os linux-gnu system i686, linux-gnu status major 1 minor 5.1 year 2002 month 06 day 17 language R I've been using bwplot to plot a dataframe that has a structure like this: str(plot.df) `data.frame': 5952

I'm asking on this list because the question will be more easily understood than on a Perl list. Lots of talented people using R also know how to use Perl, so it's easier to ask them. Running a Perl script with the -d switch can do some pretty neat things, but as far as I can tell, every line has to be done individually. Is there a way to specify where to stop in the way browser() does

I've been able to do most things I'd like to using the map package, but I can't figure out how to fill a region without drawing a black outline. I can draw the outline in a specified colour, but as soon as I set fill to TRUE, I get a black outline in addition. My map has a lot of activity on the coastline so I don't want a black line obscuring what I do there. A pale colour to

Until recently, I naively believed that a csv was the same as a tab-delimited file except commas replaced tab characters (provided of course, the characters being separated weren't either). Evidently, that is not the case. I tried reading a tab-delimited file (created in Excel [2000, W2K] and ftp'd as ASCII to linux) into R platform i686-pc-linux-gnu arch i686 os

It would appear to me that there is a bug in the postscript device when multiple pages are required. Line widths can be only 1 after the first page. I have not seen reference to this as a problem before. test.device <- function() { # looks like the problem is in the postscript device postscript(file = paste("Test.ps"), horizontal = F) on.exit(dev.off())

On Tue, 18-Dec-2007 at 11:21AM -0500, James W. MacDonald wrote: |> Duncan Murdoch wrote: |> > Yes, I agree. (As an aside, there's actually a capital S in |> > smoothScatter(), and it's a bit of a pain to install, because |> > geneplotter depends on something that depends on DBI, which is not so |> > easily available these days.) |> |> Somehow I always

These are probably very basic questions, but I don't know how one reads output such as this: [hrapgc at biomat1 R-1.5.1]$ make check make[1]: Entering directory `/home/hrapgc/local/R-1.5.1/tests' make[2]: Entering directory `/home/hrapgc/local/R-1.5.1/tests' make[3]: Entering directory `/home/hrapgc/local/R-1.5.1/tests/Examples' make[4]: Entering directory

I've been attempting to calculate the predictions from a poisson glm object, along these lines: predict(foo.glm, type = "response") and predict(foo.glm, type = "response", se.fit = TRUE) foo.glm is arrived at this way: foo.glm <- glm(Insects ~ Dad * Mum + Location, offset = log(MM), family = "poisson", data = model.df) There are two

At the end of the 'Details:' section of the help on Anova (car package), it states: The standard R `anova' function calculates sequential (type-I) tests. These rarely test meaningful hypotheses. So I thought I'd try it. However, I was perplexed to get this message: Browse[1]> Anova.glm(leaf.glm1, type ="II") Error in terms.formula(formula, data = data) :

I'm sure there's a simple way to do this, but I can only think of complicated ones. I have a number of character vectors that look something like this: "12 78 23 9 76 43 2 15 41 81 92 5(92 12) (81 78 5 76 9 41) (23 2 15 43)" I wish to get it into a list of numerical vectors like this: $Group [1] 12 78 23 9 76 43 2 15 41 81 92 5 $Subgroup1 [1] 92 12 $Subgroup2 [1] 81 78 5