similar to: installing package in Windows

After several hours of trial and error I've figured out how to create packages for use by rw1000 ("Writing R Extensions" seems not to cover this). I haven't been able to figure out how to make help files work. I want plain text only, via help(name) or ?name. I create a 'help' subdirectory containing a 00Titles file and function-specific help files in the package

Dear R-helpers, I'm learning how to compile R packages with fortran routines and use the acepack source as an example. After some hiccups (Guido told me about the need to set make_mode=UNIX) I got to the following: `make pkg-acepack' runs without error (see below), but it does not * compile any .f file in acepack/src * (hence) try to create any dll file or libs (I'm

Dear R-Helpers, I am using qtl package to analyze qtl data from QTL cartographer. I have the map file and cro file from QTL cartographer. I was trying to import these two files in R using qtl package. data=read.cross("qtlcart", ".", "crofile.txt", "mapfile.txt") ### I have matched the file structure with the one on the website of qtl package - It matches

Hello R-users! I have a style question. I know that for loops are somewhat frowned upon in R, and I was trying to figure out a nice way to do something without using loops, but figured that i could get it done quickly using them. I am now looking to see what kind of tricks I can use to make this code a bit more aesthetically appealing to other R users (and learn something about R along the

Hi R, I tried to install one local source package---"qtl" into R, but failed with the following message. I am using Macbook OS 10.8.3 with Xcode 4.6.1. ld: warning: directory not found for option '-L/usr/local/lib' ld: library not found for -lgfortran collect2: ld returned 1 exit status make: *** [qtl.so] Error 1 ERROR: compilation failed for package ¡®qtl¡¯ * removing

Please reply to: lancelot at sentoo.sn because my address: renaud.lancelot at cirad.fr is broken (should be fixed soon...). platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status Patched major 1 minor 5.0 year 2002 month 05 day 15 language R

Hello... I tried to compile an R addon package, R/qtl on a Solaris machine and I get this error. I know that R/qtl complies correctly on other platforms (Windows, Mac, Linuxes, etc), so I am wondering what the problem might be. Any ideas? Thanks, Saunak ----------------------------------- /export/home/sen/tmp <howrahbridge> <pts/5> R INSTALL

Dear R users, With package.skeleton() i have produced successfully my .Rd??s, ... Now i will run Rcmd check on ..\R\bin\ But Rcmd check (and build) on my Windows XP does not work. It`s a problem with "perl". (Translated i get the message: The instruction Perl is either wrongly written or could not not be found.) In help("check") I found this: "These may not work

---------- Forwarded message ---------- From: Waqas Shafqat <waqas1518@gmail.com> Date: Fri, Sep 6, 2013 at 10:31 PM Subject: To: rosyara@msu.edu sorry sir i have istalled plantbreeding libraray..but when i give command "require(plantbreeding)" then following message appear > require(plantbreeding) Loading required package: plantbreeding Loading required package: qtl Failed

Hello folks! I've desperately been trying to write some shared libraries/DLLs using the .Call() interface. I can't get the symbols to resolve. Under Linux, dyn.load() tells me that the following (and presumably much more) is missing: Rf_length_FG7SEXPREC Under Windows, I simply can't get R to build under cygwin for the life of me. (Embarassing to admit, but those are the facts.)

Sorry: resending this; didn't have a title on it. Trying to set up multiple spawns of R ------------------------------------------- Hi. I'm new to the list but I have a small problem with R. I'm trying to set up multiple spawns of R active at the same time on an AMD with a dual core in Vista so that I can cut down my permutation processing time. I've installed R in multiple

Full_Name: Per Broberg Version: 1.00 OS: Windows 98 Submission from: (NULL) (62.20.231.229) I tested my installation with the following: > library(lme) Loading required package: nls Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "C:\PROGRAM\R\RW1000/library/nls/libs/nls.dll": LoadLibrary failure > data(Orthodont) > fm1

Thank you for your help. I??m sorry that I found not the right entries in the R-devel. Now, I have again a problem. After installing all needed things I have run Rcmd INSTALL -l ../mypkg and respectively make mypkg By running Rcmd check I get following message: * checking for working latex ...Error: environment variable TMPDIR not set (or set to unusable value) and no default

You are using the wrong make. Please read the instructions very carefully. You _must_ use the cygwin make with the supplied Makefiles. As INSTALL says: You will also need suitable versions of at least make, sh, rm, sed, (g)awk, mkdir, echo, cp, cut, diff, grep, egrep, pwd, expr and cat; we use those from the cygwin distribution (http://sourceware.cygnus.com/cygwin and several

You are using the wrong make. Please read the instructions very carefully. You _must_ use the cygwin make with the supplied Makefiles. As INSTALL says: You will also need suitable versions of at least make, sh, rm, sed, (g)awk, mkdir, echo, cp, cut, diff, grep, egrep, pwd, expr and cat; we use those from the cygwin distribution (http://sourceware.cygnus.com/cygwin and several

Dear UseR, I get an error when I run "R CMD check" on my .tar.gz file package, and I don't understand why since I don't obtain any error with "R CMD check" on the package directory. Do you have any idea ? $ sudo ./R-2.11.0/bin/R CMD check eqtl_1.1.tar.gz and $ sudo ./R-2.11.0/bin/R CMD --check-subdirs=no eqtl_1.1.tar.gz return an Error * checking for working

In Windows, I tried to build and check Paul Gilbert's dse bundle with the command rcmd check ../library/dse It ran for a while and built the packages, then failed at the end with this: ** checking Rd files ... OK ** checking for undocumented objects ... OK ** creating syskern-Ex.R ... ERROR I get similar errors checking packages, but there make pkgcheck-foo works. I don't

Hello, I'm trying to get the count of values in each row that are above and below quantile thresholds. Thanks! Example: > x = matrix(1:30,5,6) > x [,1] [,2] [,3] [,4] [,5] [,6] [1,] 1 6 11 16 21 26 [2,] 2 7 12 17 22 27 [3,] 3 8 13 18 23 28 [4,] 4 9 14 19 24 29 [5,] 5 10 15 20 25 30 > qtl = t(apply(x, 1,

Hello... I just installed R version 1.4.0 on my laptop running Redhat Linux 7.1. I downloaded the RPM from CRAN and when I try to use a function I have used on other Redhat systems, I get the following error message. -------- > library(qtl) > gastritis <- read.cross(format="csv",dir="/home/sen/qtl/data/gastritis", +

Has anyone noticed this behavior: > library(ctest) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "J: \STATS\RW1000/library/ctest/libs/ctest.dll": LoadLibrary failure > library(ctest) > version _ platform Windows arch x86 os Win32 system x86, Win32 status major 1 minor 0.0 year 2000 month