similar to: preparing *.Rd files

Hello, I am getting output from anova() and summary(aov()) that depends on the order of the factors in the fitted model object, and this has me baffled. I see this dependency with the data.frame below but not with an example (table 6.4) from Montgomery's DOE book. This is with R 1.3.0 on Debian GNU-Linux. Where have I gone wrong? > centerpts run sample CH50mg 1 day1 dev126 0.56 2

Hello, I have installed Venables & Ripley's VR_5.3pl025-1 in RHOME/library/VR and added the path to my RLIBS environmental variable. In R (0.62.2) typing "library()" lists these packages, but typing e.g. "library(nnet)" gets "Warning: Package 'nnet' contains no R code". It appears to me the code is there and I have checked the permissions and so

Hello, What can I read to learn more about interpreters in general and the R interpreter in particular? As for my level of computer competence, I can maintain my Linux system pretty easily and I can program a bit in C and Python. TIA, Robert Burrows rbb at nebiometrics.com -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read

Hello, I recently upgraded my glibc from 2.0.7 to 2.1.1 and now I cannot get R to start. I get R : Copyright 1999, The R Development Core Team Version 0.64.1 (May 8, 1999) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type "?license" or "?licence" for distribution details. R is a collaborative

I'm trying to write a function that takes a vector of length n and then takes the first value of the vector i.e j=1 and forms a new vector of length n (i.e replicate the first value n times). This function will then calculate the absoulte difference of the original vector and the new vector and store the results omitting the difference between the value and itself. This function should

I do have full access to that directory. I have the bbHist package in c:/PROGRA~1/R/rw2011/library/bbHist directory. Then under the library directory I did check and build. Here's what I got: $ R CMD check bbHist * checking for working latex ... OK * using log directory 'c:/progra~1/r/rw2011/library/bbHist.Rcheck' * using R version 2.1.1, 2005-06-20 * checking for file

Hello - I am a fairly new user of R. I currently have R1.7 installed. I tried to install the KernSmooth package but a message tells me I need R1.8. Is there a way to update to R1.8 while in R1.7 in the same manner that I can use "update.packages", or do I have to install R1.8 in a separate directory and re-install the many packages I have already installed in R1.7? Thanks in advance for

Hi, I am using R to plot the graph and the problem I am facing with my graph is that I have lots of points concentrated in one area and It is creating a visualization challenge. Is there any commands in R I could use to solve this problem. Even if there is no command, do you know how I could tackle this problem...(I want to separate these points so I could see each of them...) Any help is much

Rd.sty defines \newlength{\middle} which seems to be in conflict with the my latex installation. Here is a minimal example: \documentclass{article} \newlength{\middle} \begin{document} \end{document} It runs fine on a Linux box: carp:136% latex test.tex This is TeX, Version 3.14159 (Web2C 7.3.1) (test.tex LaTeX2e <2000/06/01> Babel <v3.7h> and hyphenation patterns for american,

Hi there, Just wondering why my post was rejected? cheersRachel Subject: repeating autocovariate functions From: r-help-owner@r-project.org To: moyble@hotmail.com Date: Sat, 2 Feb 2013 02:56:27 +0100 Message rejected by filter rule match --Forwarded Message Attachment-- Date: Fri, 1 Feb 2013 17:56:14 -0800 From: moyble@hotmail.com To: r-help@r-project.org Subject: repeating autocovariate

I'm trying to build and check a new package. But keep getting the warning: * checking PDF version of manual ... WARNING LaTeX errors when creating PDF version. This typically indicates Rd problems. When I go into the package.Rcheck directory, package-manual.pdf is created. however if I do a pdflatex on package.tex I get the following: This is pdfTeX, Version 3.1415926-2.4-1.40.13

Hi, The following command: R CMD Rd2pdf --no-preview --output=./tmp.pdf --title=test genefu-package.Rd run against this file: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genefu/man/genefu-package.Rd (username: readonly; password: readonly) produces a very verbose error (see below) with R version 2.15.0 alpha (2012-03-07 r58622). The .Rd file has these lines in it: Version: \tab

I have a data.frame, data, with 30 factor variables. I would like to tabulate the frequencies of each variable and output to a tex file using Sweave. Here is my code chunk: <<label=tab, echo=FALSE, results=tex>>= library(xtable) for(j in 1:30){   cap <- paste("Frequency counts for Q",j,".", sep="")   xtable(t(table(data[,j])),caption=cap) } @

Dear users, I'm struggling with encoding issues for documenting some functions. The Rd format is incradible simple, however, because I'm dealing with diacritic strings, I seted up encoding in several Rd files as latin1. Under R, using the checks available in the package 'tools it performs pretty well. But when check the package as cran, I got several encoding issues. Have any one

Interesting. I gave this a try, but couldn't make this work. One would have to infuse something like <script id="MathJax-script" async src="https://cdn.jsdelivr.net/npm/mathjax at 3/es5/tex-mml-chtml.js"> </script> or <script id="MathJax-script" async src="<url-to-your-site>/mathjax/tex-chtml.js"> </script> into

Hi r-devels, I have two minor problems with special characters in Rd files when used within a \preformatted{} markup command: ------------------------------------------------------ 1. issue: backslash + single brace ------------------------------------------------------ I would like to write "\\\}" to produce \} on output (documenting the need to escape the brace once again before

Hi All, I am trying to build a new R package to submit, but it's failing to create a tex manual: R CMD check Biodem * checking for working latex ... OK * using log directory '/home/greatsage/Fede/R-packages/temp/Biodem.Rcheck' * checking for file 'Biodem/DESCRIPTION' ... OK * checking if this is a source package ... OK * Installing *source* package 'Biodem' ... ** R

Hi, I run into a problem with "R CMD Rd2dvi" command: it gives me "File `Rd.sty' not found" error (See the output message on the bottom). I get the same error when running "RCMD check". My system is: Windows 2000, R version 2.0.1, MiKTeX version 2.4. I do have a Rd.sty file in R_HOME/share/texm directory. I looked through newsgroups for any related discussions

Thanks Gabor and Duncan! It works. For those interested, I added this to the beginning of the \details{} section: \if{html}{\out{ <script id="MathJax-script" async src="https://cdn.jsdelivr.net/npm/mathjax at 3/es5/tex-mml-chtml.js"> </script> }} And then I can use: \if{html}{\out{\(B_{x(a,b)} = \int_0^x t^{a-1} (1-t)^{b-1} dt\)}} or

Dear R-users, I have some nonstandard data set which I would like to plot but don't know how to do it in R. The data is in a matrix where the rows represent samples and the columns represent locations. The entries of the matrix are 0's and 1's, where 1 represents an event and 0 represents a non-event. e.g. aberrations <- matrix(rbinom(1000, 1, 0.8), nrow=20, ncol=50,