similar to: Problem with installing survival5

Patrick Connolly wrote: > According to Richard A. Bilonick: > |> > |> I recently installed Red Hat Linux 7.0. I installed Version 1.2.0 (2000-12-15) of > |> R. I installed a number of packages including chron, date, ellipse, sgeostat, > |> survival5, and xtable. the "library()" command shows that they are installed. > |> > |> chron works but I get

I've downloaded rsept31.zip, unzipped it and have been able to run it under OS/2. When I start it I get an error (error no. 6) but the package seems to run just fine using OS/2 Warp 4's Win-OS/2 version of Windows 3.1. (I always have to tell it wherre the rprofile is. Is that normal?) I've tried to run the same Windows 3.1 version of R on a computer running Windows 3.1 (actually

Patrick Connolly wrote: > According to Richard A. Bilonick: > |> > |> I recently installed Red Hat Linux 7.0. I installed Version 1.2.0 (2000-12-15) of > |> R. I installed a number of packages including chron, date, ellipse, sgeostat, > |> survival5, and xtable. the "library()" command shows that they are installed. > |> > |> chron works but I get

One can import data from Excel ODBC source, but of course it is user's responsibility to ensure that the data are consistent. Each worksheet in the Excel workbook can be accessed as a table (for example, for Sheet1, you should type "select * from [Sheet1$]". The worksheet should have first row containing the column names, and the data rows should follow (the

survexp in survival5 doesn't seem to work for me. see below: > library(survival5) Attaching Package "package:survival5": The following object(s) are masked from package:base : sort.list > library(chron) > data(ratetables) > survexp(~ratetable(year=julian(6,1,1991), + sex=1,age=35*365.24),times=(0:30)/6*365.24) Error in as.character(as.date(c(min(R[, 3]),

> data(package=survival5) Warning: no data listing found Warning: package `survival5' contains datasets but no index The data loads OK. Mai Zhou -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the

A nearly complete port of the new survival5 package has been sent to CRAN and will soon be appearing on a mirror near you in the contrib/devel area. This new package, the successor to survival4, has a more stable likelihood maximiser for parametric survival models and incorporates penalised likelihoods for adding smoothing splines, ridge regression, and (approximately) frailties to survival

I don't have Kirk but with your data in file "Kirk.txt" in the working directory, here is how I would do it. --- > Kirk <- read.table("Kirk.txt") > names(Kirk) [1] "subject" "A" "B" "C" "response" > for(j in 1:4) Kirk[,j] <- factor(Kirk[,j]) ### Check this! > fm <- aov(response ~

I downloaded binary of survival5 for windows95 (also the splines, date). The function survsum shows up in content, has a help page, but the function itself is missing. Can we cut and paste the survsum from survival4 ? Mai Zhou P.S. I am not picking on R, not even complaining. I think R is great and I am try to contribute my (small) part to make it even better in way of bug report (or

Aren't the headers usually in the devel package (e.g., fftw-devel-2.1.5-0.dag.rh73.i386.rpm)? You might try installing the devel package too. HTH Jim James W. MacDonald Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623 >>> Rick Bilonick <rab at nauticom.net> 10/07/03 03:39PM

Anyone using the penalised partial likelihood routines in survival5 should update their version. A bug has been fixed in the S package: in coxph() models with penalised likelihood and strata it was possible in some circumstances to get an infinite loop or perhaps an incorrect answer. The new version (2.3) is on cran.r-project.org and will percolate through CRAN in the next few days. -thomas

Anyone using the penalised partial likelihood routines in survival5 should update their version. A bug has been fixed in the S package: in coxph() models with penalised likelihood and strata it was possible in some circumstances to get an infinite loop or perhaps an incorrect answer. The new version (2.3) is on cran.r-project.org and will percolate through CRAN in the next few days. -thomas

Dear R-Helpers: What other references are there on the capabilities of the survival5 package other than the help files and the chapter on survival analysis in every edition of Modern Applied Statistics with S? I'm thinking of something like "An Introduction to Survival Analysis in R" with worked examples that might complement or extend the chapter in MASS. Thanks, Spencer

Thanks for your help. I loaded XFree86-devel-3.3.3.1-3.i386.rpm from my OpenLinux CD and as you indicate this solved by X11 include file problem. I then encountered the linking same problem as you describe below. The error message is saying that the compiler can't find the libg2c library, which is its runtime library. Apparently the g77 supplied by Caldera is missing this important piece.

Hi, there I'm totally new to this. I used to use SPLUS, but think maybe useful to try R at home. But seems it doesn't like me. I got error message says ld: cannot open -lg2c: No such file or directory My OS is openlinux 2.3. I use egcs-2.91.66. I searched under /lib/egcs-2.91.66/ but found no libg2c.a. There's only a libgcc.a. Thought maybe g77 people changed

Hello - I'm trying to compile R 1.7.0 on a PowerBook running OS X 10.2.5. I've compiled R (1.6.2) successfully before on this machine, under either 10.2.3 or 10.2.4. My gcc is from the latest Apple Developer Tools release and the g77 is up-to-date via Fink. R passes ./configure just fine, with the following options: R is now configured for powerpc-apple-darwin6.5 Source

Hi All, I am relatively new to R (took a class 2 yrs ago ...), and am hoping someone can point me in the right direction for a problem I'd like to solve in R : I would like to calculate the relative mortality of a particular impairment, relative to the standard population. I.e. I'm trying to find S_relative(t) in the eqn below : S_impar(t) = S_standard(t) * S_relative(t) where

I trying to compile R-.1.7.1 under OS X. Configure worked fine; then make crashes with: /sw/lib/libg2c.a(err.o) definition of common _f__formatted (size 4) /sw/lib/libg2c.a(err.o) definition of common _f__hiwater (size 4) /sw/lib/libg2c.a(err.o) definition of common _f__putn (size 4) /sw/lib/libg2c.a(err.o) definition of common _f__reading (size 4) /sw/lib/libg2c.a(err.o) definition of common

I have installed R version 1 for windows and have installed the survival5 package in the library folder, but the base package only seems to partially acknowledge survival5's presence. How have I screwed up? The diagnostics are as follows... >library(survival5) ** no warning given.. seems OK ** >help(package=survival5) **this gives the contents of the package correctly,

Error running 'make buildworld' on FBSD 4.9 RC1(i386) source (see below); error replicated twice.....could this simply be due to a corruption of the downloaded ISO file? The softlink created before the initial error message appears to have been created OK, so not sure where the error is being generated. ***************************************************************** ===>