Displaying 20 results from an estimated 6000 matches similar to: "oro.nifti released (new package)"
2009 Dec 22
0
dcemriS4: A package for medical image analysis (S4 implementation)
dcemriS4: A package for medical image anlaysis
The dcemriS4 package is a major update, and S4 implementation, of the
dcemri package.? All previous functionality has been replicated, for
DCE-MRI and DWI, with specific emphasis on cancer imaging
applications.? Additional major features include:
? o S4 classes for NIfTI and Analyze data formats that merges header
and data information
o
2009 Dec 22
0
dcemriS4: A package for medical image analysis (S4 implementation)
dcemriS4: A package for medical image anlaysis
The dcemriS4 package is a major update, and S4 implementation, of the
dcemri package.? All previous functionality has been replicated, for
DCE-MRI and DWI, with specific emphasis on cancer imaging
applications.? Additional major features include:
? o S4 classes for NIfTI and Analyze data formats that merges header
and data information
o
2010 Mar 12
0
oro.dicom released (replaces DICOM)
The first release of oro.dicom (v0.2.4) is now available for download from
CRAN.
This is a major revision and improvement that replaces the previous DICOM
package.
New features include:
* Increased speed
* Uploading only header information (for restricted memory situations)
* Reading implicit value representations (VR's)
* Parsing SequenceItem tags (undefined lengths are allowed)
*
2010 Mar 12
0
oro.dicom released (replaces DICOM)
The first release of oro.dicom (v0.2.4) is now available for download from
CRAN.
This is a major revision and improvement that replaces the previous DICOM
package.
New features include:
* Increased speed
* Uploading only header information (for restricted memory situations)
* Reading implicit value representations (VR's)
* Parsing SequenceItem tags (undefined lengths are allowed)
*
2010 Jun 16
0
R CMD check error in v2.12.0
I have received the following error for my package oro.nifti under "CRAN
checks" for r-devel-linux-ix86; i.e.,
http://www.r-project.org/nosvn/R.check/r-devel-linux-ix86/oro.nifti-00check.html
- using R version 2.12.0 Under development (unstable) (2010-06-12 r52259)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file
2010 Mar 14
3
CRAN (and crantastic) updates this week
CRAN (and crantastic) updates this week
New packages
------------
* apcluster (1.0.1)
Ulrich Bodenhofer
http://crantastic.org/packages/apcluster
The apcluster package implements Frey's and Dueck's Affinity
Propagation clustering in R. The algorithms are analogous to the
Matlab code published by Frey and Dueck.
* BioPhysConnectoR (1.6-1)
Franziska Hoffgaard
2011 Dec 01
0
pb with 4D dicom data and oro.dicom
Hello,
I have the following problem. After a PACS upgrade in our hospital, the dynamic 3D images acquired after contrast media injection with a 3T Philips MRI are all saved in a single 4D file instead of a series of 2D images containing multiple 3D images over time. I used to convert this series of 2D dicom images in the format nfti with oro.dicom. However, I am no longer able to make oro.dicom
2012 Apr 11
0
Significant updates to medical imaging packages: TractoR and RNiftyReg
Dear all,
There have been some recent major updates to the TractoR and RNiftyReg
packages, which are available for medical image analysis applications.
If you use R for these purposes, I hope you will find the updates
useful.
RNiftyReg is an image registration package, which provides a clean
R-like interface to the NiftyReg library developed at University
College London [1]. It is aimed at
2012 Apr 11
0
Significant updates to medical imaging packages: TractoR and RNiftyReg
Dear all,
There have been some recent major updates to the TractoR and RNiftyReg
packages, which are available for medical image analysis applications.
If you use R for these purposes, I hope you will find the updates
useful.
RNiftyReg is an image registration package, which provides a clean
R-like interface to the NiftyReg library developed at University
College London [1]. It is aimed at
2010 Sep 08
0
New package for medical image registration: RNiftyReg
The first release of "RNiftyReg", an R package for registration
(alignment and resampling) of medical images, is now available on CRAN
[1]. It may also be useful for other 3D array-like data sets.
RNiftyReg is built on top of the NiftyReg library [2], and is written
in a mixture of C, C++ and R. It currently supports 3D rigid-body and
affine registration, and support for 2D and nonlinear
2010 Sep 08
0
New package for medical image registration: RNiftyReg
The first release of "RNiftyReg", an R package for registration
(alignment and resampling) of medical images, is now available on CRAN
[1]. It may also be useful for other 3D array-like data sets.
RNiftyReg is built on top of the NiftyReg library [2], and is written
in a mixture of C, C++ and R. It currently supports 3D rigid-body and
affine registration, and support for 2D and nonlinear
2010 Jun 22
4
seek() and gzfile() on 32-bit R2.12.0 in linux
I have installed both 32-bit and 64-bit versions of R2.12.0 (2010-06-15
r52300) on my Ubuntu 10.04 64-bit system. I observe the following behavior
when running the examples from base::connections. There appears to be a
problem with seek() on a .gz file when using a 32-bit installation of
R2.12.0, but the problem doesn't appear in the 64-bit installation. I
realize that seek() has been
2009 Aug 13
0
dcemri: A package for medical image analysis
dcemri 0.10 has been released on CRAN
"dcemri" is (to the best of my knowledge) the first public-domain software
package for the quantitative analysis of dynamic contrast-enhanced MRI
(DCE-MRI) and diffusion-weighted MRI (DW-MRI or DWI). Data import and
export is availble for ANALYZE or NIfTI data formats (sorry, no DICOM).
Images are stored in neurological format regardless of the
2009 Aug 13
0
dcemri: A package for medical image analysis
dcemri 0.10 has been released on CRAN
"dcemri" is (to the best of my knowledge) the first public-domain software
package for the quantitative analysis of dynamic contrast-enhanced MRI
(DCE-MRI) and diffusion-weighted MRI (DW-MRI or DWI). Data import and
export is availble for ANALYZE or NIfTI data formats (sorry, no DICOM).
Images are stored in neurological format regardless of the
2005 Aug 22
0
New CRAN package: DICOM
The package DICOM is a first attempt at a set of routines to import and
summarize medical imaging data that conforms to the DICOM standard. This
is now the industry standard for a wide variety of medical imaging
equipment (e.g., PET, MRI, CT, etc.). Please see http://medical.nema.org
for more information about the DICOM standard. A simple list structure
holds the separate header and image
2005 Aug 22
0
New CRAN package: DICOM
The package DICOM is a first attempt at a set of routines to import and
summarize medical imaging data that conforms to the DICOM standard. This
is now the industry standard for a wide variety of medical imaging
equipment (e.g., PET, MRI, CT, etc.). Please see http://medical.nema.org
for more information about the DICOM standard. A simple list structure
holds the separate header and image
2010 May 29
0
User Error during memcached integration
Hello, I hope all is well. I am hoping someone can help me with a
problem that I am certain is user error?
The configuration details below work in all my other environments
including integration, development and qa. However, the production
servers give the following error:
unable to find server during initialization.
When I telnet to the memcached box from the server having the problem
and run
2009 Feb 12
0
Released Sieve v0.1.3 and ManageSieve v0.11.3 for Dovecot v1.2.beta1
Hello Dovecot users,
It has been about two months since the last release of the new Sieve
implementation and the ManageSieve service for Dovecot v1.2. Therefore,
this release contains quite a few changes. It adds new sieve features
like the enotify extension and multiscript support. Also, quite a few
(user-reported) bugs were fixed since the last release.
Changelog Sieve v0.1.3:
*
2009 Feb 12
0
Released Sieve v0.1.3 and ManageSieve v0.11.3 for Dovecot v1.2.beta1
Hello Dovecot users,
It has been about two months since the last release of the new Sieve
implementation and the ManageSieve service for Dovecot v1.2. Therefore,
this release contains quite a few changes. It adds new sieve features
like the enotify extension and multiscript support. Also, quite a few
(user-reported) bugs were fixed since the last release.
Changelog Sieve v0.1.3:
*
2009 Jul 14
0
LondonR meeting - 21st of July
Thank you to everyone for showing such an interest in the next LondonR
meeting.
Below is the agenda for the meeting:
LondonR meeting - 21st July 2009
Time: 4pm - 7pm
Venue: The Wall
45 Old Broad Street
London
ECN 1HU
Tel: 020 7588 4845
Agenda:
* 4pm - Richard Pugh