similar to: Debian packages for R-1.3.0

Dear All, Under Debian GNU/Linux La.svd (with method = "dgesdd") sometimes gives the error "Error in La.svd(data, nu = 0, nv = min(nrow, ncol), method = "dgesdd") : LAPACK routine DGESDD gave error code -12" It seems not to depend on the data per se, but on the relationship between numbers of rows and columns. For example, if the number of columns is 100,

[ If this is considered off-topic please let me know in private mail. ] With the current version of the glibc library in Debian's "testing" and "unstable" distributions, ldconfig now loads the ATLAS optimised BLAS without any user intervention beyond installation of the Atlas and R or Octave packages. ATLAS can lead to very dramatic speed increases (up to a factor of ten,

Hi, I'm trying to make a legend with a justified list of numbers, so I thought I would use phantom(0) to align the 3-digit numbers properly with the 4-digit ones: legend(x, y, xjust=1, yjust=1, lty=c(1,2,3,4,5), adj=c(0,0.5), legend=expression(phantom(0)*300*plain(K), phantom(0)*550*plain(K), phantom(0)*830*plain(K),

Hi, I patched my R-1.1.1 sources to add support for a couple more fonts to the postscript device. It works for alphanumeric characters, but I notice that I should be supplying an AFM file with ISOLatin1Encoding (I'm using a standard AFM for now, and get some parsing errors from R when I open the postscript device). Is there a program/script which will re-encode my AFM files from

R version: 0.62.1 (June 15, 1998) I just very naively attempted to grab the 'bicreg' package for Bayesian model selection from the StatLib library, and get it running under R. I've hit a brick wall very quickly, and as an R novice I'm not sure where to go next. Here's what happened: > bicreg(as.matrix(hiv[,c(-17,-18)]),as.matrix(hiv[,18])) Error: invalid formula >

I'm trying to find a clever way to re-map data from a database query into a data.frame. Querying a database often returns a table (data.frame) like this: GeneID MethodID Value 6 1 123 6 2 456 6 3 987 7 1 234 7 3 432 8 2 190 8 3 34 8 1 864 Note that GeneID=7 doesn't have a value for MethodID=2. Note that GeneID=8 doesn't have the

Dirk's mail to r-devel bounced because of his peculiar return address. He asked me to forward this for him. P.S. I have tried building R with atlas2 on a Debian GNU/Linux 2.2 system but I have not yet managed to out-fox the configure script to get it to use the desired shared object library. -- Douglas Bates bates@stat.wisc.edu Statistics Department

Full_Name: Michael J. O'Donnell Version: 1.3.1-1 OS: Linux, Debian Woody distribution Submission from: (NULL) (64.34.17.133) I tried to install the R packages for the Debian GNU/Linux Woody distribution. I added "deb http://cran.r-project.org/bin/linux/debian woody main" to my /etc/apt/sources.list, and ran dselect with the apt-get method. I selected all of the R packages that I

This seems newbish, but I can''t seem to get this gem to install no matter what I do. The gem in question is login_generator, and no matter what folder I put the .gem file in, it can''t read locally - am I missing something? Remote install hangs at updating the source. -- Posted via http://www.ruby-forum.com/.

Just in case anyone cares or is hitting the same problem: to install current mgcv (1.0-5) on 1.9.0 on Knoppix/Debian unstable I had to: # cd /usr/lib # ln -s /usr/lib/atlas/libblas.so.3 libblas-3.so # ln -s /usr/lib/atlas/liblapack.so.3 liblapack-3.so Otherwise compilation couldn't find -lblas-3 or -llapack-3 (I could have gotten away with the links in /usr/lib/atlas instead of /usr/lib,

Dear list member, I have the following data example ke <- data.frame(patid=c(1,1,1,2,3,3),a=c(1,2,2,1,1,2)) I want to add another variable b, such that the max of 'a' by id is returned i.e data ke becomes ke <- data.frame(patid=c(1,1,1,2,3,3),a=c(1,2,2,1,1,2),b=c(2,2,2,1,2,2)) Any help will be appreciated. Oluwakemi [[alternative HTML version deleted]]

I've recently installed Debian/GNU Linux 2.2. The R package on the debian website and Official CD is 0.90.x, so I checked cran for a more recent deb package, with the following result. homebrew:~# apt-get install r-base Reading Package Lists... Done Building Dependency Tree... Done Some packages could not be installed. This may mean that you have requested an impossible situation or if you

Graham, Confirmed. I will pass that along to the R team. As 1.8.0 is in code freeze, this may not get addressed, unfortunately. Regards, Dirk On Fri, Oct 03, 2003 at 03:16:35PM +1000, Graham Williams wrote: > Package: r-base-core > Version: 1.7.1.cvs.20030927-1 > Severity: normal > > > $ R > > R : Copyright 2003, The R Development Core Team > Version 1.8.0 beta

I have spatial data on a sphere (the Earth) for which I would like to run an gls model assuming that the errors are autcorrelated, i.e. including a corSpatial correlation in the model specification. In this case the distance metric should be calculated on the sphere, therefore metric = "euclidean" in (for example) corSpher would be incorrect. I would be grateful for help on how to

I feel like Marlon Brando in "On the Waterfront" where he's told "It's not your night, kid", except for me it has been the last two months trying to debug memory problems. Now I can't even install an old version of this package on a netbook running the Ubuntu 10.10 netbook remix because it can't find the libraries libf77blas and libatlas. I have even gone to

Greetings all, I am using lmer (lme4 package) to analyze data where the response is a proportion (0 to 1). It appears to work, but I am wondering if the analysis is treating the response appropriately - i.e. can lmer do this? I have used both family=binomial and quasibinomial - is one more appropriate when the response is a proportion? The coefficient estimates are identical, but the standard

My Cisco 7905 can't register with Asterisk (1.0.7-BRIstuffed-0.2.0-RC7k on Debian stable). It could, however, register with another installation of Asterisk and the settings on the phone (apart from the SIP proxy address) haven't changed since then. On the new Asterisk box my sip.conf contains this: [jeremy] type=friend regexten=801 allow=g729 host=dynamic secret=PASSWORD nat=yes

Hi , I am using the plot function for some data , and the plot is coming back pure black , with scales on the side . Regards Malcolm [[alternative HTML version deleted]]

I am encountering segfaults when checking the lme4 package on an Athlon64 system if I use the acml blas. R was built as a 64-bit application using the GCC 4.0.3 compiler suite including gfortran. The version of acml is 3.5.0 gfortran64. I do not encounter the segfaults when I compile R with R's built-in BLAS. The errors occur in the first example in lme4 in a call to lmer. It looks like

Hi All, I've just rebuild the latest R with the Goto BLAS on our new Intel quad core machines. I did a few basic matrix calculations, and I was very impressed by the performance I saw. I wonder if anyone has a more rigorous benchmarking program for R. I downloaded a old R test/benchmarking program (see below), and this didn't work with the current R, and so I wondered if anyone could