similar to: R binaries for Red Hat Linux/SPARC

We are having problems building R on Red Hat Linux 6.0/Sparc. R compiles with no problem but then it fails "make tests". Specifically, the line eigen(cbind(-1,c(1:2,0),0:2)) # complex values causes a segmentation fault. Previous versions of Red Hat Linux did not give this problem. The eigen() function is one of the rare cases in the base library where Fortran code is called via the

Hello, In WinBUGS 1.4 manual (http://www.mrc-bsu.cam.ac.uk/bugs/winbugs/manual14.pdf), the gamma density is presented as dgamma(r,mu) where r and mu are the shape and rate parameters, respectively. In JAGS (rjags) manual version 1.0.2, May 9, 2008 (http://www-fis.iarc.fr/~martyn/software/jags/jags_user_manual.pdf), on page 26 the gamma density is presented as dgamma(mu,r) instead of dgamma(r,mu).

When reading comma-delimited files as saved from a spreadsheet (unfortunately many of my scientific collaborators give me these) in read.table(), missing values are spotted most of the time. Unfortunately when comma is the first character on the line it gets it wrong. For example, reading the file 1,,3 ,5,6 ,8,9 with read.table("test.dat", header=F, sep=",") R gives

Hi, I am trying to compile R-2.1.1 on Solaris10, with the Studio10 compilers. When I try to compile 64bit with CFLAGS="-xarch=amd64" export CFLAGS I get a configure failure on checking for rl_callback_read_char in -lreadline... no checking for history_truncate_file... no configure: error: --with-readline=yes (default) and headers/libs are not available unset CFLAGS and its fine

Hi I am having problems compiling R on a Solaris 10 opteron box we have on trial. checking for Fortran libraries of g77... -L/usr/ccs/lib -L/usr/lib - L/usr/local/lib -L/usr/local/lib/gcc-lib/i386-pc-solaris2.10/3.3.2 - L/usr/ccs/bin -L/usr/local/lib/gcc-lib/i386-pc- solaris2.10/3.3.2/../../.. -lfrtbegin -lg2c -lm -lgcc_s -lfrtbegin: - lg2c: checking how to get verbose linking output from

Has anyone tried to build R on Suns by linking to the versions of BLAS and LINPACK in the Sun Performance Library rather than the standard versions included in the distribution? On the face of it this would seem to be a highly desirable thing to do since these versions of the routines are more efficient and can exploit parallelism on multiprocessor machines. David Clayton MRC Biostatistics

Hi All, I am having some problems with my R compile and matrix.c My config setings are:- setenv CC "cc -xarch=amd64" setenv F77 "f95 -xarch=amd64" setenv CXX "CC -xarch=amd64" setenv CFLAGS "-xO5 -xlibmil -dalign" setenv FFLAGS "-xO5 -xlibmil -dalign" setenv CXXFLAGS "-xO5 -xlibmil -dalign" setenv SHLIB_CXXLDFLAGS -lCstd setenv LDFLAGS

Attached is Red Hat's judgement on my bug report for the missing value corruption problem that appears in RH 9. https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=88174 Martyn -------------- next part -------------- An embedded message was scrubbed... From: bugzilla@redhat.com Subject: [Bug 88174] Optimization causes corruption of NA value in the R language Date: Mon, 7 Apr 2003 12:13:24

> Date: Tue, 7 Nov 2000 17:34:37 +0000 (GMT) > From: Jonathan Myles <mylesj at icrf.icnet.uk> > > I've now got a colleague at MRC-BSU to compress it, and email it as an > attachment to my UNIX machine, where I uncompressed it and then ftp'ed > it in ascii format to my laptop. So it doesn't seem to be an ascii/bin > issue ... Is it possible to get a binary

Dear R users, I'd like to announce a new package on CRAN called ``denstrip''. It implements ``density strips'' and other graphical methods for illustrating and comparing distributions in a compact fashion. Posterior distributions of parameters are often summarised using point and line drawings of means and credible intervals. This is common, for example, in multiple

Dear R users, I'd like to announce a new package on CRAN called ``denstrip''. It implements ``density strips'' and other graphical methods for illustrating and comparing distributions in a compact fashion. Posterior distributions of parameters are often summarised using point and line drawings of means and credible intervals. This is common, for example, in multiple

RPMs of R-0.64.1 are now available for Red Hat Linux/Intel 6.0. They should be mirrored to a CRAN site near you over the weekend. If you are desperate you can get them now from: ftp://ftp-fis.iarc.fr/pub/R/RedHat/6.0/i386 GNOME SUPPORT ------------- If you have GNOME installed, then use the "R-base-gnome" package. Otherwise just use the "R-base" package. This is change from

We have a user who wants to use Outlook with our Dovecot IMAP server but doesn't like the way Outlook handles deletion with IMAP. Ironically she would like Outlook to move the message to her Trash folder, just like Outlook does with "local" folders, I guess. So I enabled the "deleted-to-trash" plugin (v0.3) on our Dovecot 1.2.17 server (built for SPARC, solaris 10,

Hi -- I'm trying to package R for inclusion on some upcoming Red Hat Powertools distribution. I have started with the 0.61 version packaged by Martyn Plummer <plummer at iarc.fr> (Thanks Martyn!) and have upgraded to 0.62-2. I have succeeded in running R demo's on i386-redhat-linux-gnu, and now I am also trying to get the alpha and sparc versions working. On sparc-redhat-linux,

I have just uploaded the R port of the CODA (Convergence Diagnostics and Output Analysis) package to CRAN. This is a suite of functions for analyzing the output of Markov Chain Monte Carlo simulations and diagnosing lack of convergence of the simulated output. It is designed to work with (but is not necessarily limited to) the BUGS program: http://www.mrc-bsu.cam.ac.uk/bugs/ I have made

I have just uploaded the R port of the CODA (Convergence Diagnostics and Output Analysis) package to CRAN. This is a suite of functions for analyzing the output of Markov Chain Monte Carlo simulations and diagnosing lack of convergence of the simulated output. It is designed to work with (but is not necessarily limited to) the BUGS program: http://www.mrc-bsu.cam.ac.uk/bugs/ I have made

Is there any way of running R in ESS using -n and -v arguments other than the default? Thanks Jonathan -- Dr. Jonathan Myles e-mail:jonathan.myles at mrc-bsu.cam.ac.uk MRC Biostatistics Unit Tel. 01223 330371 Institute of Public Health FAX 01223 330388 University Forvie Site Robinson Way CAMBRIDGE CB2 2SR

Hi Just one of those niggles....... I've just been trying to plot a filled circle. I thought that this would do it plot(1,1,type="n") points(1,1,pch=1,bg="blue",cex=5) #bg: background ("fill") color for open plot symbols But I need to do this instead points(1.2,1,pch=19,col="blue",cex=5) Am I misunderstanding the "bg" option in the points

Hi Does anyone know of any R coding/functions for MCMC approaches? I am currently using BUGS but I wonder if the bazaar has produced anything? I think I am pushing BUGS to it's limit and possibly past it at the moment. John -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send

Is there any way of getting just the LaTex output which R CMD Rd2dvi generates on the way to produces a .dvi file, which could then be incoorporated into another document? Thanks, Jonathan -- Dr. Jonathan Myles e-mail:jonathan.myles at mrc-bsu.cam.ac.uk MRC Biostatistics Unit Tel. 01223 330372 Institute of Public Health FAX 01223 330388 University Forvie Site