similar to: One Year Student in Bioinformatics (Biomarkers discovery)

Dear all, The CRUK MI have multiple positions in and around bioinformatics, biostatistics and computational biology. These range from HPC and mathematical programming, through biostatistics and biomarkers, to computational biology and bioinformatics. Focuses include single cell genomics and personalised medicine in lung and prostate cancer. For full details, please visit our website at:

Job Title : Postdoctoral Position in Biostatistics/Bioinformatics Background The joint research unit between bioM?rieux, international leader in in vitro diagnostic, and Hospices Civils de Lyon, second-largest University Hospital Network in France, develops a research program dedicated to the study of injury induced immunosuppression. This program aims at (i) describing and understanding the

BioInformatics Scientist Job Code: 10-TR25 Location: Cambridge, MA Description We are seeking a highly motivated, independent bioinformatics scientist to join a group of scientists, analysts and programmers to develop tools and methodologies for large-scale gene expression data analysis. The group supports a variety of research projects in target and drug discovery as well as biomarker

Dear all, My company located in Innsbruck, Austria, has an opening for a biostatistician. If you have any interest, feel free to contact me or Dr Markus Speiser (markus.speiser*at*biocrates.com). Best regards, David ################## Biostatistician (m/f) Job Description BIOCRATES Life Sciences AG is a leading metabolomics company using a mass-spectrometry based technology

Bioinformatics Scientist position in Maryland Description Title: Bioinformatics Scientist I/II - Translational Science Location - Gaithersburg, MD Contact: higgsb at medimmune.com ** Please do not send a CV if you do not have most of the qualifications listed below ** Local candidates preferred Major Duties and Responsibilities: We have an opening in the pharmacogenomics group within the

I have 2 positions open with a top pharmaceutical company in New Jersey. This position is not requiring pharmaceutical experience as long as the candidate has strong SAS and R experience. In particular they are looking for strong graphics experience in S-Plus/R (lattice or Trellis?TM graphics). If you would like to learn more about this position please contact Christina Kinchen at ckinchen at

Dear all, I have a big problem to compile R-3.0.2 on our SUSE SLES 11 Server. Make breaks up with fortran errors and so the installation isn't successful This is a part from the make run output.: gcc-3.3 -fpic -L/usr/lib64/gcc-lib/x86_64-suse-linux/3.3.3-hammer/ -lg2c -ffloat-store -c dlamch.f -o dlamch.o dlamch.f: In function `dlamch': dlamch.f:89: warning: INTRINSIC

Some weeks ago I asked for help because I got "relocation truncated to fit: R_MIPS_GPREL16 against `.srdata'" error messages when trying to compile Samba 3.5.8 including FAM support on SGI Irix 6.5.28 using gcc 3.4.6 . A hint was found on this page: <http://sourceware.org/ml/ecos-discuss/2000-04/msg00214.html>, which explains the cause of the message and suggests to try

We are looking for a MSc or PhD holder in Bioinformatics,Molecular/Computational Biology or Computer Science to support ourbiomarker team in the identification, validation and furtherdevelopment of biomarkers. The chosen candidate will be part of ourmultidisciplinary team conducting studies to discover and developdiagnostic biomarkers as well as biomarkers for the characterization ofdisease models

Hi all, I am compiling Samba 3.5.8 on Irix 6.5.28 using gcc 3.4.6 . Towards the end the linking phase stops with the following error: [...] Compiling ../lib/popt/poptparse.c Linking bin/smbd /usr/lib32/libfam.a(fam.o): In function `FAMOpen2': /xlv44/6.5.28m/work/eoe/lib/libfam/libfam_n32_M3/fam.c++:51: relocation truncated to fit: R_MIPS_GPREL16 against `.srdata'

Hello All The third virtual conference on genomics and bioinformatics will host by North Dakota State University September 16-19, 2003 More details http://www.ndsu.edu/virtual-genomics/conference_2003.htm Call for papers and 2002 accepted papers http://www.ndsu.edu/virtual-genomics/papers_2003.htm Third Virtual Conference on Genomics and Bioinformatics: September 16-19, 2003 Advances in

Dear R-Helpers, I am a novice in survival analysis. I have the following code: for (i in 3:12) print(coxph(Surv(time, status)~a[,i], data=a)) I used it to fit the Cox Proportional Hazard models separately for every available parameter (columns 3:12) in my data set - with intention to compare the Hazard Ratios. However, some of my variables are in range 0.1 to 1.6, others in range 5000 to

Hi, Is there anyone know if BUGS language allows the combination of variables as response such as Y[i] <- a*X1[i]+b*X2[i] Y[i] ~ dnorm(c,d) It seems doesn't work in my model. The problem is between two ######. The error message is > modelCheck("BayesBioMarker.BUGS") model is syntactically correct > modelData(paste("BUGS_data.txt",sep="")) data

I currently have an opening with a Large Pharmaceutical Company for a Sr. SAS programmer with extensive R experience. This position is in New Jersey, but could possibly work out of Illinois or Massachusetts if necessary. Please email me at ckinchen@smithhanley.com, or contact me via my website link at http://www.smithhanleyconsulting.com/pharma/about/bios.asp?id=7 . I can be called at 800-684-9921

-----Original Message----- From: Christina Kinchen [mailto:ckinchen at smithhanley.com] Sent: Thursday, October 25, 2007 5:05 PM To: 'r-sig-jobs at r-project.org' Subject: Sr. SAS and R programmer needed in MA, NJ, or IL SAS Programmer III needed for large Pharmaceutical company in Chicago. The individual can work in Chicago, New Jersey or Massachusetts. The ideal candidate has extensive

Hi, I am trying to calculate net reclassification improvement (NRI) and Inegrated Discrimination Improvement (IDI) for a survival dataset to compare 2 risk models. It seems that the improveProb() in Hmisc package does this only for binary outcome, while rcorrp.cens() does take survival object, but doesn't output NRI or IDI. Can anyone suggest any other packages that can calculate NRI and IDI

Dear Sirs. I am working with the R packages Hmisc and PredictABEL to make NRI estimates from my Cox models with and without a specific biomarker. According to Pencina et al (Statistics in Medicine 2010, DOI: 0.1002/sim.4085 ), a continuous/non-categorical NRI (NRI>0) is to be used when there are no obvious reason to categorize risk, such as the risk of future cardiovascular events in patients

Dear all, I found a discrepancy while performing a power calculation for a two sample t-test in R and S-PLUS, respectively. For given values of sample number (5 each), sd (0.2) , significance level (0.01), and a desired power (80%) I looked for the difference in means. These values differ: 0.5488882 in R and 0.4322771 in S-PLUS (see dump below). Did I overlook any detail or confuse some

Dear R-helpers, This may sound simple to you, but I'm a beginner in this, so please be forgiving. I have a following problem: two analytes were measured in patient's blood on 4 occasions: ProteinA and ProteinB. How to correctly evaluate correlation between ProteinA and ProteinB? I tried: x <- data.frame(Patient.ID=rep(1:10, each=4), Visit=rep(c(1:4),10), ProteinA=rnorm(m=10,

Hello, I have made an R script that prepares a NONMEM dataset and I would like to start the NONMEM run right after the dataset is ready. I am using windows XP, R 2.9.1 and NONMEM 6. I have prepared a run.bat file that looks like this: ---------------------------------------- call K:\nmvi\NMdirectories.bat call K:\nmvi\nmfe6 "path\control.txt" "path\output.txt"