similar to: Announcing geneviewer v0.1.10 Now Available on CRAN

Hello Dovecot users, In the last week two nasty bugs were found in the new Sieve implementation. Primarily, the include extension did not work when a compiled binary was loaded from disk. This is something that is still not tested by the test suite, giving this bug the opportunity to slip through. Also, the value matching implementation would sometimes cause a assertion failure. Other than

Hello Dovecot users, In the last week two nasty bugs were found in the new Sieve implementation. Primarily, the include extension did not work when a compiled binary was loaded from disk. This is something that is still not tested by the test suite, giving this bug the opportunity to slip through. Also, the value matching implementation would sometimes cause a assertion failure. Other than

This is to announce that we plan to release R version 2.6.0 on Wednesday October 3, 2007. The following information is mainly for developers, package maintainers and repository maintainers. The planned procedure is Sep 5: "Grand Feature" Freeze 2.6.0 alpha Sep 19: Feature Freeze 2.6.0 beta Sep 26: Code Freeze 2.6.0 RC Oct 3: Release 2.6.0 GFF:

This is to announce that we plan to release R version 2.5.0 on Tuesday April 24, 2007. The following information is mainly for developers, package maintainers and repository maintainers. The planned procedure is March 27: "Grand Feature" Freeze 2.5.0 alpha April 10: Feature Freeze 2.5.0 beta April 17: Code Freeze 2.5.0 RC April 24: Release 2.5.0

This is to announce that we plan to release R version 2.7.0 on Tuesday April 22, 2008. The following information is mainly for developers, package maintainers and repository maintainers. The planned procedure is Mar 25: "Grand Feature" Freeze 2.7.0 alpha Apr 8: Feature Freeze 2.7.0 beta Apr 15: Code Freeze 2.7.0 RC Apr 22: Release 2.7.0 GFF: No

Hi All I am wondering if people based on their experience could share what methods one could use to compare two gff/gtf files. The reason why I want to do so is that we have constructed a RNA-Seq based transcriptome and would like to compare it with reference transcriptome we had from in-silico approaches. Ideally we are looking to find out 1. new genes we see 2. transcripts where the

Dear guangchuang, I was stopped by the following error when using Package: clusterProfiler on R 2.15.3 on windows 7. Error in xzfile(file, “wb”, compression = 9) : Cannot open the connection In addition: warning message: cannot initialize lzma encoder, error 5 The too functions: Gff2GeneTable() and buildGOmap() are not working because of this error. Could you please let me know how to fix these

Hiya. Is it possible to share profiles between different users with Samba 3.0CVS acting as a PDC, and XP Workstations? All users are using the same profile share; the concept is that there's an "Admin" user which can read/write to this, so I can setup things such as Internet Explorer settings / Desktop/Start Menu items / color scheme, etc..., and all other users only have read

https://bugzilla.mindrot.org/show_bug.cgi?id=1700 Summary: ssh-agent dies under high load Product: Portable OpenSSH Version: 5.1p1 Platform: ix86 OS/Version: Linux Status: NEW Severity: minor Priority: P2 Component: ssh-agent AssignedTo: unassigned-bugs at mindrot.org ReportedBy: kernel at

Hi, yes a bold statement, but I get different behaviour from 2.6.2 and 2.7.0 in read.table, and I don't find any documentation in http://cran.r-project.org/src/base/NEWS. A file like (space delimited): foo + . bar - . 2.7.0: > tab <- read.table("test.txt",as.is=TRUE) > tab V1 V2 V3 1 foom 0 0 2 bar 0 0 while until now and on 2.6.2 > tab <-

So basically I have made a HTML file with a table in it. Column 3 contains a GenBank number and is always proceeded by "=GenBank">". I want to read the file and return the number which comes directly after this (the contents of column 3). Ideally I would like to save this number as a string for use later in the script, but any help is good help. Been at this for HOURS and

Hi, I have installed samba 2.2.7 and cannot get swat to work. I have entry in /etc/services file and alo in /etc/xinetd.d/swat. I'm logging in as root/rootpassword from local or other machine. i'm getting error 401 Bad Authorization username or password incorrect What am i doing wrong??? Thanks Mohan -----Original Message----- From: samba-request@lists.samba.org

Hi, I am trying to work with the ape package, and there is one thing I am struggling with. When calling the *read.GenBank()* function, I can get it to work with an object created like this: *>x <- c("AY395554","AY611035", ...)* *>read.GenBank(x)* However, I am trying to use the function to fetch several hundred sequences at once. So I have been testing with small

I just ran this again and got this error: leelab/NCBI_Data_old/GenBank/htg write failed on leelab/NCBI_Data_old/GenBank/htg : Error 0 rsync error: error in file IO (code 11) at receiver.c(243) Received signal 16. (no core) rsync error: received SIGUSR1 or SIGINT (code 20) at rsync.c(229) The command I am running is: /usr/local/bin/rsync -auv --delete --rsh=/usr/bin/ssh lpgfs104:/share/group/*

I suspect you meant WD <- "~/Documents/Scripting/R_Studio/Sequences/" but I am entirely unfamiliar with the packages you are using, and know nothing about what is on your hard drive. For future reference: A) Read the Posting Guide. This is a plain text email list, and your html formatting gets removed leaving a mess that is not always readable. B) Most frequent users of R

Hi all: I got basic rsync working (not server mode). Basically it went to another server via ssh, backed up subdireactories and stored on the local server. But I am trying to use the feature of "exclude" and could not get it working rigjt. I am trying to back up /export/home/* (all of users) on another machine but exclude a certain types of files. here is one of my tested exclude

Hi I am trying to read genbank est flat files. Is there any function in R to do that. I was looking for something similar to SeqIO.parse(input_handle, "genbank") in bioPython that convert the genebank sequence into fasta sequence. (One option is to call biopython from R but I am not familiar with python functions so I want to avoid that and I am keeping it as last resort) Thanks and

Hi all, I am learning R by "doing". And this is my first post. I want to use R: 1- to fetch a DNA sequence from a databank (see bellow) and 2- store it as FASTA file. The problem: neither an error is prompted nor the fasta file is created. Testing the code (see bellow), I notice that everything works until the *"write.dna" *command - which is not creating the fasta file.

Concerning rsync 3.0.5 on Fedora 10: The improved readability of --stats when --human-readable is specified is great, but --human-readable does not seem to effect the %l format type for --out-format. Is there an alternative format type that lists the file length in a human readable format, perhaps optionally if --human-readable is specified? thank you -------------- next part --------------

Hello. I have installed R with dnf. Also I have installed gmp and gmp-devel with dnf (I think gmp was already installed). In R I did > install.packages('Rmpfr') But then I get configure: error: GNU MP not found, or not 4.1.4 or up, see http://gmplib.org What must I do? [[alternative HTML version deleted]]