Displaying 20 results from an estimated 3000 matches similar to: "installation: while running make, unable to run pdflatex on 'NEWS.tex'"
2024 Mar 02
1
installation: while running make, unable to run pdflatex on 'NEWS.tex'
? Fri, 1 Mar 2024 10:46:53 -0500
Benjamin Tyner <btyner at gmail.com> ?????:
> my platform info:
>
> Platform: x86_64-pc-linux-gnu (64-bit)
> Running under: Ubuntu 22.04.4 LTS
Quick things first: have you installed all the build-dependencies? apt
build-dep r-base (maybe with --install-suggests? haven't tried that in
a while) should do that. In particular, the build
2012 Apr 04
3
Rgui maintains open file handles after Sweave error
Hello Folks,
When I run the document below through sweave, rgui.exe/rsession.exe
leaves a file handle open to the sweave-001.pdf graphic (as verified by
process explorer). Pdflatex.exe then crashes (with a Permission Denied
error) because the graphic file is locked.
This only seems to happen when there is an error in the sweave document.
When there are no errors, no file handles are left open.
2010 Sep 15
1
running 'make' failed during vignette creation ('R CMD build') on Windows
Hi,
This is a follow-up to the problem reported here:
https://stat.ethz.ch/pipermail/r-devel/2010-September/058460.html
After I updated R-2.12 to 2010-09-13 r52905 on the Bioc build system,
some of the packages that have a Makefile in <pkg>/inst/doc still
don't build on Windows. For example, 'R\bin\R.exe CMD build adSplit'
gives:
* checking for file
2013 Feb 04
1
Error building R from SVN - unable to run 'pdflatex' on 'example-1.tex'
G'day,
I'm trying to build R using the code from SVN. I am able to successfully
build the source from here:
http://cran.r-project.org/src/base/R-2/R-2.15.2.tar.gz
However, when building the code checked out from SVN (either from 2.15.2
tag, or the trunk) I get the following error:
Error: running Sweave on vignette
2008 Oct 24
0
Problem with "plflatex wrapper.tex"
Hi, All:
I encountered problems running "pdflatex wrapper.tex", as
suggested on "www.r-project.org" -> Newsletter -> (near the bottom of
the page). After 220 lines of seemingly successful processing, I got an
error copied below. I hit <enter> a few times, and the "pdflatex"
finished, apparently successfully.
Comments?
Thanks,
2009 Apr 16
2
there are fontencoding problem in Sweave
I want write article by russian language using Sweave. For cyrillic text
LaTeX use T2A encoding
\usepackage[T2A]{fontenc}
But in Sweave.sty we find:
\RequirePackage[T1]{fontenc}
It is source of critical problem.
For example Rnw file
$ cat estimation.Rnw
\documentclass[A4paper]{article}
\usepackage[T2A]{fontenc}
\usepackage[utf8]{inputenc}
\usepackage[russian,english]{babel}
2008 Apr 09
1
Windows problem related to using shortPathName for Sweave style file
In the process of updating R to R 2.7 alpha or R 2.7 beta for the
BioConductor 2.2 builds on Windows, I have hit a snag because the BioC
build system has long path names (e.g. D:\biocbld\bbs-2.2-bioc\R) and
these path names are not resolving properly by MiKTeX 2.7 during
vignette construction. Take, for example, the attached vignette from
Biobase, Bioconductor.Rnw. I have built R from source
2009 Mar 17
1
Combining Sweave and fancyvrb
I find Sweave very useful and I was trying to combine it with the
latex package fancyvrb. I was trying to get line numbering and labels
in order to reference the lines where particular commands occur.
Unfortunately, I haven't been able to figure out how to do it. Maybe
somebody can help me.
The following is a sample Rnw file: the first part shows what I would
like to get, the second what I
2002 Nov 13
1
Package documentation and rd.sty
Hi all,
I've got a basic question regarding package documentation and rd.sty. I
wrote my first own package, and now I would like to place the documentation
into the appendix of another LaTex document. Seemingly I cannot simply
\usepackage{Rd}, as this will modify the page-settings of my document. Is
there a minimum style file which will just define the environments and
commands needed for
2019 Apr 21
2
R-devel (rev 76409) fails 'make check': non-generic function 'isSymmetric' given to findMethods()
Hello,
Most likely I'm doing something wrong, but am at a loss as to what the
issue is. I have a clean checkout of trunk here:
?? ~/svn/r-devel/R$ svn info
?? Path: .
?? Working Copy Root Path: /home/btyner/svn/r-devel/R
?? URL: https://svn.r-project.org/R/trunk
?? Relative URL: ^/trunk
?? Repository Root: https://svn.r-project.org/R
?? Repository UUID:
2019 Dec 06
1
Error in close.connection(p) : ignoring SIGPIPE signal
Andreas,
How right you are! Still, I find it curious that in the context of the
while(TRUE) loop, I am allowed to do this 653 times, with failure on the
654th attempt. Perhaps there is something asynchronous going on? If I
eliminate the looping, it does indeed fail (as expected) on the first
attempt to close the pipe.
Regards
Ben
On 12/6/19 2:04 AM, Andreas Kersting wrote:
> Hi
2019 Dec 06
2
Error in close.connection(p) : ignoring SIGPIPE signal
Not sure if this is a bug, so posting here first. If I run:
?? cnt <- 0L
?? while (TRUE) {
? ? ?? cnt <- cnt + 1L
? ? ?? p <- pipe("echo /dev/stdin > /dev/null", open = "w")
? ? ?? writeLines("foobar", p)
? ? ?? tryCatch(close(p), error = function(e) { print(cnt); stop(e)})
?? }
then once cnt gets to around 650, it fails with:
?? [1] 654
??
2008 May 04
1
texi2dvi instead of pdflatex in R2.7.0? and related bioc 2.2 builds
Dear lists:
I am somewhat puzzled by the use of texi2dvi/pdflatex in R2.7.0. When
building EBImage (bioconductor) with 2.7.0 I get the same error both in
Windows and Linux, which reads the following:
** building package indices ...
* DONE (EBImage)
* creating vignettes ... ERROR
/usr/bin/texi2dvi: pdflatex exited with bad status, quitting.
Error in texi2dvi(file = bft, pdf = TRUE, clean =
2008 Dec 29
1
kvoptions.sty
On an new install of Ubuntu 8.10 64bit, I am having trouble with make
check-all checking package 'survival' and elsewhere:
l.100 \fontencoding\encodingdefault\selectfont
! LaTeX Error: File `kvoptions.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
! Emergency stop.
<read *>
l.2231
2011 Mar 25
0
testing presence of pdflatex in R CMD check
The nodes of our cluster do not have pdflatex installed. When
running R CMD check there on a package with no errors in documentation,
then R-2.13.0-alpha and R-2.12.2 report a possible error in Rd files,
while R-2.11.1 did not. The platform is 64 bit CentOS.
The output of
R CMD check tree_1.0-28.tar.gz
under the above three versions of R contains the following.
R-2.11.1
stderr
sh:
2013 Mar 13
0
how to set the pdflatex path
Dear all,
This is my first post to the mailing list. I asked this question a little
while ago on stackoverflow but did not get an answer. Please allow me to
ask again.
I have R set up on both Windows7 and kUbuntu12 machines. On Windows, I
happen to have both MikTeX and TeXlive available (and both work).
How could I instruct R to call TeXlive instead of MikTeX?
Both MikTeX and TeXlive are on my
2013 Apr 22
1
Hmisc & pdflatex
Dear Rxperts,
Apologize for posting it to a wrong thread..Hence, the re-post...
I am trying to use pdflatex from Hmisc, I get the error message. "pdflatex
is not available"... The version of Hmisc is the latest one (got the
warning that it was compiled under R version 2.15.3) .
The version of R on my machine is
> version
platform i386-w64-mingw32
arch i386
os
2010 Jun 28
2
How to run Bibtex with pdfLatex in StatEt/MikTex on Windows ?
Hello,
I'm running R2.10, Eclipse, StatEt and MikTex 2.8 to create Sweave
documents, and everything seems to work great, until today...
I was trying to add citations from a Bibtex file, but I just got [?]
citations. However, if I open the .tex file that StatEt created in
MikTex and run the latex+bibtex+pdflatex command, the citations are present.
Does anyone know how to either configure
2018 Jan 11
2
OpenBLAS in everyday R?
Thanks Keith. We checked, and indeed libopenblas is not linked against
libomp nor libgomp. We suspect this is because we used conda to install
R and OpenBLAS. So I guess we should be barking up the conda tree instead?
By the way, I also noticed on my home machine (Ubuntu),
/usr/lib/libopenblas.so.0 is also not linked against those, for what
that's worth.
Regards,
Ben
On 01/10/2018 12:04
2020 Jan 19
2
rpois(9, 1e10)
????? This issue arose for me in simulations to estimate confidence,
prediction, and tolerance intervals from glm(., family=poisson) fits
embedded in a BMA::bic.glm fit using a simulate.bic.glm function I added
to the development version of Ecfun, available at
"https://github.com/sbgraves237/Ecfun".? This is part of a vignette I'm
developing, available at