similar to: 'R CMD INSTALL' keeps going on despite serious errors, and returns exit code 0

>>>>> Herv? Pag?s >>>>> on Fri, 3 Nov 2023 15:10:40 -0700 writes: > Hi list, > Here is an example: > ??? hpages at XPS15:~$ R CMD INSTALL CoreGx ??? * installing > ??? hpages at XPS15:~$ R CMD INSTALL CoreGx > ??? * installing to library ?/home/hpages/R/R-4.4.r85388/site-library?

Hi I'm running the latest R on a presumably up to date Linux server. 'Doing something silly I'm sure, but can't see why my saved PLMset objects come out all wrong. To use an example: Setting up an example PLMset (I have the same problem no matter what example I use) > library(affyPLM) > data(Dilution) # affybatch object > Dilution = updateObject(Dilution)

-----Original message----- > From:H <agents at meddatainc.com> > Sent: Monday 3rd September 2018 14:52 > To: Centos Mailing List <centos at centos.org> > Subject: [CentOS] Centos on Dell XPS15 > > Is anyone successfully running Centos 7 on a Dell XPS15? If so, which model? If not, what was the problem? > > Thank you! I only ran Fedora 28 Workstation Live from

On 09/07/2018 04:01 AM, H wrote: > On September 4, 2018 10:51:09 AM GMT+02:00, Patrick Laimbock <patrick at laimbock.com> wrote: > > -----Original message----- > > From:H <agents at meddatainc.com> Sent: Monday 3rd September 2018 14:52 To: Centos Mailing List <centos at centos.org> Subject: [CentOS] Centos on Dell XPS15 Is anyone successfully running

On 09/21/2018 03:59 PM, H wrote: > On 09/18/2018 08:58 PM, H wrote: >> On 09/07/2018 04:01 AM, H wrote: >>> On September 4, 2018 10:51:09 AM GMT+02:00, Patrick Laimbock <patrick at laimbock.com> wrote: >>> >>> -----Original message----- >>> >>> From:H <agents at meddatainc.com> Sent: Monday 3rd September 2018 14:52 To:

Is anyone successfully running Centos 7 on a Dell XPS15? If so, which model? If not, what was the problem? Thank you!

http://www.srh.noaa.gov/fwd/productviewnation.php?pil=OKXZFPOKX&version= 0 can anyone suggest how I could set up asterisk@home to read out allowed the following text when I dial extension 850? 815 PM EST WED FEB 16 2005 .OVERNIGHT...MOSTLY CLEAR. LOWS 30 TO 35. NORTHWEST WINDS 15 TO 20 MPH WITH GUSTS UP TO 30 MPH...DIMINISHING TO 10 TO 15 MPH LATE. .THURSDAY...PARTLY CLOUDY. COOLER

Dear all, When running R CMD check on Windows XP to test my package I get the following warning message: "* checking line endings in C/C++/Fortran sources/headers ... WARNING Found the following sources/headers with CR or CRLF line endings: src/xpsDict.h" The problem is that this file is created by the compiler AUTOMATICALLY during the compilation process, and since the file is

Hi, After updating R-2.12 on the Bioconductor build system about 1 week ago (we update R every 4-6 weeks for our devel builds), we've started to see something never seen before on Windows: for some BioC packages, 'R CMD build' would produce no output at all (0 byte) and, of course, no source tarball. Even though, the code returned by the command is 0! See an example of this is here:

Hello, since Bioconductor devel branch 3.11 started, which is operating with R-devel 4.0.0 (for e.g. 2019-11-03 r77362 on OS X 10.11.6 El Capitan), my package CFAssay 1.21.0 is not built on none of all three Systems, Linux, Windos and Mac. The error message refers to xy.coords which is called by R function plot.default. I found out that it has to do with the S3 object system. In my package I

Dear all, Since many years the following C++ code does compile on ALL Bioconductor servers (Linux, Windows, Mac) without any warnings: Int_t numsels = 0; //number of selected entries ... for (Int_t i=0; i<size; i++) { numsels = (arrMask[i] == 1) ? ++numsels : numsels; }//for_i Even on the recently added release server 'zin2' Linux (Ubuntu 12.04.4 LTS) the

Hi Mr Tierney, I have noticed an error message from R 1.12.x's CMD check for a while (apparently prof Ripley completely rewrote CMD check in R 1.12+) e.g.: http://bioconductor.org/checkResults/2.7/bioc-LATEST/snpMatrix/lamb2-checksrc.html ---------------- * checking R code for possible problems ... NOTE Warning: non-unique value when setting 'row.names': ?new? Error in

I've had success on "older" model Lenovos.....(T-410 / T-420 / T-430) but anything beyond those seems to have some issue or another. I was even able to swap the standard drive to an SD (250GB) on a T-430 and it's running g like a champ. A lot of the newer stuff is OK as long as you don't have any boutique drivers for video network or sound. YMMV. On Sep 29, 2016 9:18 PM, John

With C:\Users\User>R --version R version 2.14.0 RC (2011-10-23 r57410) Copyright (C) 2011 The R Foundation for Statistical Computing ISBN 3-900051-07-0 Platform: x86_64-pc-mingw32/x64 (64-bit) running download.file('http://www.ebi.ac.uk/microarray-as/ae/files/E-TABM-25/E-TABM-25.raw.1.zip', tempfile()) sometimes gets 52% (according to the dialog box) of the way through, and then

Hi, Since C++ code compiled with g++ 4.6.3 on Windows (the version included in latest Rtools) now can produce things like '1.#IND' when writing doubles to a file (using the << operator), I wonder whether scan() shouldn't support those things. Right now (with recent R devel and latest Rtools) we get errors like: Error in scan(file, what, nmax, sep, dec, quote, skip, nlines,

The release version of ChemmineR is failing on windows. It seems to be a build script issue though, possibly something on your side. The package was building fine a few weeks ago and I have not modified it. Can you please have a look? Thanks. "C:/Users/BIOCBU?1/BBS-3?1.6-B/R/bin/Rscript" -e "library(rmarkdown); library(BiocStyle); rmarkdown::render('ChemmineR.Rmd')"

Hi List, Just wondering if anyone has tried CentOS on this laptop. HP ENVY 15-j067cl 15.6 Sam's club is selling it for $699 right now. http://www.samsclub.com/sams/hp-15-6-touch-nb-intel-core-i7-4700qm/prod11610128.ip?navAction=push HP ENVY 15-j067cl 15.6" Touchscreen Laptop Computer, Intel Core i7-4700QM, 8GB Memory, 750GB Hard Drive Thanks, -- Stephen Clark *NetWolves* Director of

Hi, The R-based version of R CMD build doesn't work for me on Windows: E:\biocbld\bbs-2.7-bioc>R\bin\R CMD build meat\Biobase * checking for file 'meat\Biobase/DESCRIPTION' ... OK * preparing 'Biobase': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to re-build vignettes Warning in shell(sprintf("%s > %s

Hi, More about the new --resave-data option As mentioned previously here https://stat.ethz.ch/pipermail/r-devel/2011-April/060511.html 'R CMD build' and 'R CMD INSTALL' handle this new option inconsistently. The former does --resave-data="gzip" by default. The latter doesn't seem to support the --resave-data= syntax: the --resave-data flag must either be

The Bioconductor build for a package DirichletMultinomial on R Under development (unstable) (2013-02-26 r62077) -- "Unsuffered Consequences" at http://bioconductor.org/checkResults/devel/bioc-LATEST/DirichletMultinomial/george2-buildsrc.html shows * creating vignettes ... ERROR ... Error: processing vignette ?DirichletMultinomial.Rnw? failed with diagnostics: chunk 21 (label