similar to: horizontal grouped stacked plots and removing space between bars

Hi, I have a data frame like this: > dput(df) structure(list(ID = 1:8, Type = c("gmx mdrun -ntmpi 8 -ntomp 1 -s benchPEP.tpr -nsteps 10000 -resethway", "gmx mdrun -ntmpi 8 -ntomp 1 -s benchPEP.tpr -nsteps 10000 -resethway", "gmx mdrun -ntmpi 8 -s benchPEP.tpr -nsteps 4000 -resetstep 3000", "gmx mdrun -ntmpi 8 -s benchPEP.tpr -nsteps 4000 -resetstep

Hi; I have a R script that includes a call to genoud(); genoud process lasts about 4 seconds, what would be OK if I hadn't have to call it about 2000 times. This yields about 2 hours of processing. And I would like to use this script operationally; so that it should be run twice a day. It seems to me that the parallel processing option included in genoud() divides the task inside the function

Hi, I am trying to simulate animal movement in a gridded landscape made up of cells. At each time step (iteration), the animal moves from one cell to another in a random fashion. This is how I am simulating movement, where a and b are the x,y co-ordinates of the animal at the previous time step: for (i in 1:no.of.steps){ direction <- sample(1:8, 1) if(direction == 1){ a <- a b <- b -

Thanks! This is in regards to bug 3084, I am trying to find out why samba is crashing. I am using glibc-2.4 with nptl threads. It seems to be a memory or threading issue. Thanks for any help. Running smbd through gdb: Breakpoint 6, charset_name (ch=CH_DISPLAY) at lib/charcnv.c:57 57 const char *ret = NULL; (gdb) Continuing. Substituting charset 'ANSI_X3.4-1968' for

Dear wonderful R community, I've been creating color-coded concentric circles using the "points" function, but I just realized that what I would really like to do is draw color-coded concentric half-circles. (Because I want to communicate information about the diameters-- half-circles are sufficient to show diameters AND they leave ample room to one side of the figure to label

attempting to do multivariate modelling in R with known future conditions (in this case variable 'b') using MSBVAR and hc.forecast. The sample code (a paired down representation) does not give anywhere near the expected results - I am assuming that a forecast 8 steps out would approximate 'a' as the sequence 1.1,2.1,3.1,100.1 corresponding to the input set. I have varied the input

I saw the other topic posted 13 Sep 2010, about the fixme ... unimplemented error. I get that too. However, my system also crashes. I'm running Ubuntu 10.4 with Wine 1.3.1 on a AMD 1055t cpu (no overclocking) with a MSI 785G-e53 motherboard. The system is stable otherwise. This is executing the folding at home client, the Windows client beta 6.30. This is used by enough people and it

I am trying to use optim() to minimize a sum-of-squared deviations function based upon four parameters. The basic function is defined as ... SPsse <- function(par,B,CPE,SSE.only=TRUE) { n <- length(B) # get number of years of data B0 <- par["B0"] # isolate B0 parameter K <- par["K"]

Buenos días. Hago mis mapas con el código que os copio abajo, pero me gustaría que me dibujase las líneas del mapa después de poner los puntos para que se vean. Puedo hacer los puntos más pequeños, pero entonces quedan separados y yo quiero que rellenen el mapa. Gracias, como siempre, Manuel print(ggplot(legend=FALSE)+geom_path(data=map_data('world'), aes(x=long,

Muy buenas. Quiero hacer un mapa que me pinte en azul los valores negativos y en rojo los positivos. Los negativos llegan hasta -400 y los positivos hasta 200. Si pongo limits=c(-200, 200), me colorea bien los positivos (rojo), pero los negativos por debajo de -200 me los pone gris. Si pongo limits=c(-400, 200), me colorea bien los negativos (azul), pero los positivos apenas se ven. Necesito que

Gracias a los tres, Raúl, Marcelino y Carlos. Lo del "get" de Marcelino me da la respuesta a lo que yo exactamente preguntaba, y funciona, pero ahora tengo problemas con el for, por lo que probablemente recurra al eval parse de Raúl o Carlos, que ya tienen el for. Aún así, lo intento 1º con el get. Con subset(df, subset=get(GT[i])>0) el problema es que en el for hago un

Dear all, I am trying to make a series of waffle plot-like figures for my data to visualize the ratios of amino acid residues at each position. For each one of 37 positions, there may be one to four different amino acid residues. So the data consist of the positions, what residues are there, and the ratios of residues. The ratios of residues at a position add up to 100, or close to 100 (more on

Gracias Emilio. Si, son asimétricos porque se mueven en rangos distintos. De hecho, miden cosas distintas, pero una muestra no puede ser positiva y negativa a la vez. Me planteo multiplicar las positivas por 2 y al editar el mapa corregirlo para que indique los valores reales. Eso funcionaría, pero son muchos mapas y quizás haya una función en ggplot que evite el problema directamente. Manuel El

Gracias Marcelino. Si, (i in 1:length(GT)), lo he utilizado mil veces, pero se me sigue olvidando de una vez a otra. Lo iba a mirar, pero me centré primero en que me hiciera bien el mapa. He probado el for y me da este error: Error in aes(x = lon, y = lat, color = get(GT[i]), size = 2) + scale_colour_gradient(low = ("white"), : non-numeric argument to binary operator

No sé muy bien, Carlos, como hacerlo, pero no parece más sencillo que lo de multiplicar por 2 los positivos y después editar el mapa. De lo que decías, Emilio, de cambiar el color del punto central creo que haría más confusa la interpretación. El vie., 20 sept. 2019 a las 10:33, Carlos Ortega (<cof en qualityexcellence.es>) escribió: > Hola, > > Una alternativa que suele

I have the following code and data data.csv "","Goal","Frequency","Weight","Group" "1","Move",13,0.245283018867925,"Public" "2","Create",10,0.188679245283019,"Public" "3","Strengthen",30,0.566037735849057,"Public"

I am having trouble getting data labels to display over the provinces in a GADM map of Canada. Specifically, I need the variable "Number" from the data set "by_province", grouped by "region", to appear on the corresponding regions of the map. The data set "by_province" looks like this: long lat order hole piece region

Hi all; I am running the following ggplot codes. Runs well. However, I need to reflect the numeric values of the log10_P to the point size in the graph. Your help highly appreciated, Regards, Greg p <- ggplot(mydata, aes(x = X, y = log10_P)) + theme_bw() +theme(panel.border=element_blank()) + theme(legend.position="top", axis.text=element_text(size = 8)) (p1 <- p +

Dear R users, I need to produce rainfall maps using R. I know that this is possible, I looked though the web, I found the example below reported (the author is Andrew Tredennick). I would ask you if this is the most performing way to make rainfall maps; if yes would someone be able to give me an example of how file.asc and pointfile.csv should be? If no would somebody please show me another way

Hi Petr and Richard; Thanks for your responses and supports. I just faced a different problem. I have the following R codes and work well. p <- ggplot(a, aes(x=Phenotypes, y=Metabolites, size=abs(Beta), colour=factor(sign(Beta)))) + theme(axis.text=element_text(size = 5)) p1<-p+geom_point() p2<-p1+theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank(),