similar to: Robustifying R_CleanTempDir a bit more

On 2/16/23 15:09, Ivan Krylov wrote: > Hello, > > This is probably a very minor point, but R_CleanTempDir may still have > a shell injection in it. I couldn't find a way to shoot the user in the > foot in a significant way (by, say, accidentally removing ~), thanks to > R disallowing spaces in the path, but if Sys_TempDir somehow acquires a > value of

The call to system() probably is an internal call used to delete the session's tempdir(). This sort of failure means that a potentially large amount of disk space is not being recovered when R is done. Perhaps R_CleanTempDir() could call R_unlink() instead of having a subprocess call 'rm -rf ...'. Then it could also issue a specific warning if it was impossible to delete all of

On 11/24/20 11:27 AM, Jan Gorecki wrote: > Thanks Bill for checking that. > It was my impression that warnings are raised from some internal > system calls made when quitting R. At that point I don't have much > control over checking the return status of those. > Your suggestion looks good to me. > > Tomas, do you think this could help? could this be implemented? I think

On Tue, 24 Nov 2020, Jan Gorecki wrote: > As for other calls to system. I avoid calling system. In the past I > had some (to get memory stats from OS), but they were failing with > exactly the same issue. So yes, if I would add call to system before > calling quit, I believe it would fail with the same error. > At the same time I think (although I am not sure) that new allocations

Dear R-developers, Some of the more fat scripts (50+ GB mem used by R) that I am running, when they finish they do quit with q("no", status=0) Quite often it happens that there is an extra stderr output produced at the very end which looks like this: Warning message: In .Internal(quit(save, status, runLast)) : system call failed: Cannot allocate memory Is there any way to avoid this

Thanks Bill for checking that. It was my impression that warnings are raised from some internal system calls made when quitting R. At that point I don't have much control over checking the return status of those. Your suggestion looks good to me. Tomas, do you think this could help? could this be implemented? On Mon, Nov 23, 2020 at 7:10 PM Bill Dunlap <williamwdunlap at gmail.com>

As for other calls to system. I avoid calling system. In the past I had some (to get memory stats from OS), but they were failing with exactly the same issue. So yes, if I would add call to system before calling quit, I believe it would fail with the same error. At the same time I think (although I am not sure) that new allocations made in R are working fine. So R seems to reserve some memory and

Hi, I'm using the R library(car) to draw confidence/prediction ellipses in a scatterplot. >From what i understood the ellipse() function return an ellipse based parameters: shape, center, radius . If i read dataEllipse() function i can see how these parameters are calculated for a confidence ellipse. ibrary(car) a=c(12,12,4,5,63,63,23) b=c(13,15,7,10,73,83,43) v <-

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

Dear R devel, I have a C++ app that calls into embedded R to perform some analytic calculations. When my app encounters a segmentation fault, R always prints the following crash prompt and asks me to enter an action: *** caught segfault *** address 0x8, cause 'memory not mapped' Possible actions: 1: abort (with core dump, if enabled) 2: normal R exit 3: exit R without saving workspace

Hello, I've been searching for a method for identify outliers for quite some time now. The complication is that I cannot assume that my data is normally distributed nor symmetrical (i.e. some distributions might have one longer tail) so I have not been able to find any good tests. The Walsh's Test (http://www.statistics4u.info/ fundsta...liertest.html#), as I understand assumes that the

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This allows the script to be run from somewhere other than the top-level build directory. --- autogen.sh | 11 +++++++++-- 1 file changed, 9 insertions(+), 2 deletions(-) diff --git a/autogen.sh b/autogen.sh index 1a9a020..ab52ab6 100755 --- a/autogen.sh +++ b/autogen.sh @@ -2,6 +2,13 @@ # Run this to set up the build system: configure, makefiles, etc. # We trust that the user has a recent

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

I am trying to compile R-2.4.1 in 64-bit on Solaris 10 running on AMD hardware. I am trying to do this with Sun Studio 11. My config.site looks like this: #! /bin/sh AR="/usr/ccs/bin/ar" TEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/tex" LATEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/latex" PDFTEX="/usr/local/teTeX/bin/i386-pc-solaris2.10/pdftex"

Hi Pavel, thank you for you response. objdump -T showed that there are no symbols defined in liblldb.so. After few compilations I found that problem is with linking with LLD (-DLLVM_ENABLE_LLD=ON) without the directive everything is ok. Hana ============= $ objdump -T lib64/liblldb.so lib64/liblldb.so: file format elf64-x86-64 DYNAMIC SYMBOL TABLE: 0000000000000000 w D *UND*

Hi, I''m trying to trace the io of a given file, but I have a feeling that it''s been done via a script, as such I''d like to be able to tell the names of the calling processe tree, similar to what ptree produces. Is there any way to get this information without running ptree using system()? Thanks, Darren.

> ssh -v test OpenSSH_for_Windows_7.7p1, LibreSSL 2.6.5 debug1: Reading configuration data C:\\Users\\jsore/.ssh/config debug1: C:\\Users\\jsore/.ssh/config line 11: Applying options for test debug1: Setting implicit ProxyCommand from ProxyJump: ssh -v -W '[%h]:%p' apple debug1: Executing proxy command: exec ssh -v -W '[test]:22' apple CreateProcessW failed error:2 posix_spawn:

This is with last night''s Xen snapshot (apr 24th), on kernel 2.6.12-rc3 - but the mess is so horrid that I''m not quite sure how to fix it... This oops prevents xen from starting xenU domains. Basically xend does the following: 1) mmap /proc/xen/privcmd 2) call an ioctl to populate the mmap 3) munmap the mapping created in (1) During the munmap, the dom0 kernel oopses, as