similar to: R package builder silently continues after unclosed brace

R CMD build does not actually run any R code, it just puts the files together into a .tar.gz archive. R CMD INSTALL will run the R code, and fail. Gabor On Sat, Jan 25, 2020 at 4:59 PM Andy Manka <andy.manka at gmail.com> wrote: > > > If you start a function in one file but don't close it, the package > will still build if you manage to close it in a later file. Like so:

I ran into a problem recently trying to update a package which uses S4 methods using a recent beta of R. I think I can reproduce it with a simple example. I have package called `testpkg' in directory testpkg/. In the R/ subdirectory of testpkg/ I have a file called testpkg.R which contains the following two lines: setClass("testpkg", representation(pts = "list"))

R CMD check gives an error when a vignette entry %\VignetteDepends{} has any extra space at the end. Maybe this is by design, but I found it confusing. Changing the function "vignetteMetaRE" in tools package could solve the problem. I.e. vignetteMetaRE <- function(tag) paste("[[:space:]]*%+[[:space:]]*\\\\Vignette", tag,"\\{([^}]*)\\}", sep = "")

When parse():ing R code from *file* with a unclosed string, that is, a string that has an open quoation mark, but not a ending one, the string seems to be closed automagically. Is this a "bug"? Example: > code <- "x <- '123"; > parse(text=code) # Gives an error as expected Error in parse(file, n, text, prompt) : parse error >

I want to write an R function using R's C interface that takes a 2-column matrix of increasing, non-overlapping integer intervals and returns a list with those intervals plus some added intervals, such that there are no gaps. For example, it should take the matrix rbind(c(5L, 6L), c(7L, 10L), c(20L, 30L)) and return list(c(5L, 6L), c(7L, 10L), c(11L, 19L), c(20L, 30L)). Because the output is

If the async transaction commitment failed, we need close the current transaction handler, or the current transaction will be blocked to commit because of this orphan handler. We fix the problem by doing sync transaction commitment, that is to invoke btrfs_commit_transaction(). Signed-off-by: Miao Xie <miaox@cn.fujitsu.com> --- fs/btrfs/ioctl.c | 4 ++++ 1 files changed, 4

The function - btrfs_cont_expand() forgot to close the transaction handle before it jump out the while loop. Fix it. Signed-off-by: Miao Xie <miaox@cn.fujitsu.com> --- fs/btrfs/inode.c | 8 ++++++-- 1 files changed, 6 insertions(+), 2 deletions(-) diff --git a/fs/btrfs/inode.c b/fs/btrfs/inode.c index 634dd797..ee57b40 100644 --- a/fs/btrfs/inode.c +++ b/fs/btrfs/inode.c @@ -3510,15

OpenSSH folks, We're run into a problem with OpenSSH_2.5.1p2 servers that we didn't see before, and I can't reproduce with OpenSSH_2.3.0p1 servers. (OpenSSH_2.3.0p1 seems to work correctly) We're seeing this bug on Solaris 2.7 and on Linux 2.2.15 machines. Basically, if you log into a machine, fork a process that leaves stdout, stderr, or stdin open, and try to log out of that

Lines 129-131: \code{grep(value = FALSE)} returns a vector of the indices of the elements of \code{x} that yielded a match (or not, for \code{invert = TRUE}. This will be an integer vector unless the input There should be a closing parenthesis after \code{invert = TRUE}

There are probably more unmatched parentheses around: detect <- function(file) { text <- paste(readLines(file), collapse = "") nchar(gsub("[^(]", "", text)) != nchar(gsub("[^)]", "", text)) } docs <- list.files("r-source-trunk/src/library", pattern = "\\.Rd$", full.names =

Bugs item #28801, was opened at 2010-12-25 11:02 You can respond by visiting: http://rubyforge.org/tracker/?func=detail&atid=411&aid=28801&group_id=85 Category: win32-process Group: Code Status: Open Resolution: None Priority: 3 Submitted By: Rafa? Michalski (royaltm) Assigned to: Nobody (None) Summary: unclosed handle in Process.setpriority/getpriority Initial Comment: Using

Large packages sometimes mask each other's functions and that creates a headache, especially for teaching code, since function signatures may depend on which order packages were loaded in. One of my students proposed using the idiom <function> <- <package>::<function> ... in a preamble, when we use just a small subset of functions from a larger package. I like that

help(letters, htmlhelp=TRUE) fails. Under the Mac OSX gui, the message is 'Help for the topic "a" was not found.' Under the version documented below, and under Windows, the message is "No documentation for 'a' in specified packages and libraries:" repeated for all the elements of letters, then followed by "you could try

On 16/11/2017 4:53 PM, Boris Steipe wrote: > Large packages sometimes mask each other's functions and that creates a headache, especially for teaching code, since function signatures may depend on which order packages were loaded in. One of my students proposed using the idiom > > <function> <- <package>::<function> > > ... in a preamble, when we use

A vignette in <pkg>/inst/doc with \documentclass[]{article} \begin{document} <<test>>= try(stop('err')) @ \end{document} produces an error with R CMD build <pkg>: ... ** building package indices ... * DONE (testPkg) * creating vignettes ... ERROR Error in try(stop("err")) : err This is not seen with Sweave alone. > sessionInfo() R version 2.5.0

Hi Gabriel, here is a simple package for reproducing the problem. https://github.com/Jiefei-Wang/testPkg Best, Jiefei On Thu, Oct 8, 2020 at 5:04 AM Gabriel Becker <gabembecker at gmail.com> wrote: > Jiefei, > > Where does the code for your altrep class live? > > Thanks, > ~G > > On Wed, Oct 7, 2020 at 4:25 AM Jiefei Wang <szwjf08 at gmail.com> wrote: >

Obvious? How about "obscurity"? Just directly use pkg::fun if you have name collision. -- Sent from my phone. Please excuse my brevity. On November 16, 2017 4:46:15 PM PST, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: >On 16/11/2017 4:53 PM, Boris Steipe wrote: >> Large packages sometimes mask each other's functions and that creates >a headache,

Dear list members, is it somehow possible to include figures to the html help pages of individueal functions (containing for example a plot produced by that function?) I thought about adding these figures into a 'graphs' subfolder of the package folder and then to somehow insert some sort of html link into the documentation code. I use inlinedocs for creating the documentation. Any

Hi all, The coercion function defined for the ALTREP object will not be called by R when an assignment operation implicitly introduces coercion for a large ALTREP object. For example, If I create a vector of length 10, the ALTREP coercion function seems to work fine. ``` > x <- 1:10 > y <- wrap_altrep(x) > .Internal(inspect(y)) @0x000000001f9271c0 13 INTSXP g0c0 [REF(2)] I am

I'm encountering a problem caused by class unions from unloaded packages that are referenced by the still-loaded subclasses. In essence, when the class union is loaded initially, it registers itself as a super class of the component classes in the S4 cache. When the package the class union lives in is unloaded, it does not undo that registration. Here is an MRE of the problems it causes: