Displaying 20 results from an estimated 1000 matches similar to: "R 4.0.0 rebuild status"
2020 Jul 06
2
R 4.0.0 rebuild status
R-BiocFileCache is now branched for f32 (finally). You should be able to
build it if/when the PDC comes back up. Lotta random outages right now.
Tom
On Mon, Jul 6, 2020 at 10:40 AM Jos? Ab?lio Matos <jamatos at fc.up.pt> wrote:
> On Tuesday, 9 June 2020 03.40.52 WEST Tom Callaway wrote:
> > Over the last several days, I've been working hard to get all of the
> Fedora
>
2020 Jun 09
0
R 4.0.0 rebuild status
On Tue, 9 Jun 2020 at 04:42, Tom Callaway <tcallawa at redhat.com> wrote:
>
> Over the last several days, I've been working hard to get all of the Fedora
> R packages rebuilt against R 4.0 in rawhide (in the F33-R-4 side tag). With
> the exception of R-biomaRt, R-BSgenome, R-GenomicAlignments, and
> R-rtracklayer, I believe everything is built and updated to the latest
2020 Jul 06
0
R 4.0.0 rebuild status
On Tuesday, 9 June 2020 03.40.52 WEST Tom Callaway wrote:
> Over the last several days, I've been working hard to get all of the Fedora
> R packages rebuilt against R 4.0 in rawhide (in the F33-R-4 side tag). With
> the exception of R-biomaRt, R-BSgenome, R-GenomicAlignments, and
> R-rtracklayer, I believe everything is built and updated to the latest
> versions. And of those
2020 Jul 07
3
R 4.0.0 rebuild status
On Tue, 7 Jul 2020 at 12:38, Jos? Ab?lio Matos <jamatos at fc.up.pt> wrote:
>
> On Monday, 6 July 2020 21.08.53 WEST Tom Callaway wrote:
> > R-BiocFileCache is now branched for f32 (finally). You should be able to
> > build it if/when the PDC comes back up. Lotta random outages right now.
> >
> > Tom
>
> I have re/built them using the side tag but I do not
2020 Jul 09
1
R 4.0.0 rebuild status
On Tue, 7 Jul 2020 at 09:58, Jos? Ab?lio Matos <jamatos at fc.up.pt> wrote:
>
> On Tuesday, 7 July 2020 11.44.48 WEST I?aki Ucar wrote:
> > Try with the CLI (see "man bodhi"):
> >
> > $ bodhi updates edit <update> --addbuilds <builds>
>
> I found that the best call in this case is instead of --addbuilds to use
> --from-tag since then
2020 Jun 23
3
R 4.0.0 rebuild status
On Tue, 9 Jun 2020 at 10:21, I?aki Ucar <iucar at fedoraproject.org> wrote:
>
> > Given the huge amount of builds (and rebuilds) in this process, I am
> > strongly disinclined to attempt this work for Fedora 32 (the idea of
> > hundreds of bodhi overrides does not fill me with joy), but I would not
> > prevent someone else who wished to try to do so.
>
> Note
2020 Jun 23
2
R 4.0.0 rebuild status
Maybe Elliott?
On Tue, 23 Jun 2020 at 15:01, Tom Callaway <spotrh at gmail.com> wrote:
>
> At this point, I simply don't have the time.
>
> Tom
>
> On Tue, Jun 23, 2020, 6:06 AM I?aki Ucar <iucar at fedoraproject.org> wrote:
>>
>> On Tue, 9 Jun 2020 at 10:21, I?aki Ucar <iucar at fedoraproject.org> wrote:
>> >
>> > > Given
2020 Jun 24
8
R 4.0.0 rebuild status
Thanks, Jos? and Elliott. I can help with reviews.
I attach here a list of batches of CRAN packages to be rebuilt in
order (batches separated by a blank line), and the script that
generates it. Hope it helps.
I?aki
On Wed, 24 Jun 2020 at 11:35, Elliott Sales de Andrade
<quantum.analyst at gmail.com> wrote:
>
> I could do so, but it wouldn't be until this weekend.
>
> Also,
2020 Jul 14
2
R 4.0.0 rebuild status
On Tue, 14 Jul 2020 at 01:19, Jos? Ab?lio Matos <jamatos at fc.up.pt> wrote:
>
> On Saturday, 11 July 2020 11.32.32 WEST Jos? Ab?lio Matos wrote:
> > If I do not hear until then I will push the update Monday night (Western
> > Europe time zone.
>
> Well I tried but I did not succeeded both using the web interface and cli
> interfaces:
>
>
2020 Jul 07
2
R 4.0.0 rebuild status
On Tue, 7 Jul 2020 at 15:58, Jos? Ab?lio Matos <jamatos at fc.up.pt> wrote:
>
> On Tuesday, 7 July 2020 11.44.48 WEST I?aki Ucar wrote:
> > Try with the CLI (see "man bodhi"):
> >
> > $ bodhi updates edit <update> --addbuilds <builds>
>
> I found that the best call in this case is instead of --addbuilds to use
> --from-tag since then
2016 Jul 05
4
R-3.3.1 RPM release
Hi All,
I have installed on a RHEL 5.7 server the recent R-3.3.0 rpm but I would like to upgrade to the latest now available R-3.3.1 . I have not found so far the rpm, I would like to know if and when it will be available?
Thanks in advance,
Cris
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2016 Jun 06
3
problems compiling packages | 3.3.0 | Linux
Apologies if this email is a top post. I'm not sure how to reply to a
thread if I'm not subscribed.
We recently encountered the same issue that Evan reported on 6/4 and I can
confirm that updated to 3.3.0-5 does address the build failure. Will
3.3.0-5 make it into EPEL? If so, do you have any idea when? The current
package is breaking our build process and I'm wondering if it's
2010 Aug 30
2
S4 Method Rd Warning
Hello,
I am using R 2.11.0. I have a curious problem where I get a warning in R CMD check which is seemingly not relevant to my Rd file.
The warning says :
* checking Rd \usage sections ... WARNING
Bad \usage lines found in documentation object 'enrichmentCalc':
<unescaped bksl>S4method{enrichmentCalc}{GenomeDataList, BSgenome}(rs, organism, seqLen=NULL, ...)
<unescaped
2010 Aug 30
2
S4 Method Rd Warning
Hello,
I am using R 2.11.0. I have a curious problem where I get a warning in R CMD check which is seemingly not relevant to my Rd file.
The warning says :
* checking Rd \usage sections ... WARNING
Bad \usage lines found in documentation object 'enrichmentCalc':
<unescaped bksl>S4method{enrichmentCalc}{GenomeDataList, BSgenome}(rs, organism, seqLen=NULL, ...)
<unescaped
2016 Feb 12
2
Segmentation fault on doveadm search -A with a huge user base
Hi,
I'm using dovecot 2.2.9 with a director/backend setup. The user base is
about 4711 users currently.
If I start at one of the directors
doveadm search -A all savedbefore 5000d
it terminates with
doveadm(1rrissma): Error: doveadm server disconnected before handshake: EOF
doveadm(1rrissma): Error: 2001:638:913:f33::5:ff:24245: Command search failed for 1phaaman: EOF
2016 Jun 09
1
Fixed updates for EL5 / EL6
I know, I know, you've heard this song before... ;)
EL5: https://bodhi.fedoraproject.org/updates/FEDORA-EPEL-2016-09c8007e64
EL6: https://bodhi.fedoraproject.org/updates/FEDORA-EPEL-2016-0a9e4df655
Please go download -8 and test it. It looks good on my end. If it works
for you (with CRAN modules), please give positive karma so it will land
in updates-stable faster than two weeks.
Thanks
2015 Oct 13
2
TLS communication director -> backend with X.509 cert checks?
On 14 Oct 2015, at 00:34, Heiko Schlittermann <hs at schlittermann.de> wrote:
>
> Hi Timo,
>
> Heiko Schlittermann <hs at schlittermann.de> (Di 13 Okt 2015 22:33:23 CEST):
>>> Does the attached patch work? Compiles, but untested.
>> I'm about to test it.
>
> It seems to update the struct mail_host, but it looks as if the data
> in mail_host
2015 Oct 13
2
Dualstack IPv4/IPv6 setup with directors
Hi,
still using 2.2.9, I've two directors, and these directors
use both IPv4/IPv6 addresses.
`host directors.<domain>` returns one A and AAA for each
of the two directors:
directors.<domain> has address 149.x.y.96 (director1)
directors.<domain> has address 149.x.y.97 (director2)
directors.<domain> has IPv6 address
2010 May 31
3
after updating biomaRt cannot connect any more
I recently updated R 2.10.1 Patched (2010-02-20 r51163)
This morning I reinstalled biomaRt using biocLite.
Now I can no more connect to biomaRt and even the following instruction is hanging for a while until
the same error message pops up.
> listMarts()
Error in value[[3L]](cond) :
Request to BioMart web service failed. Verify if you are still connected to the internet. Alternatively the
2019 Jul 04
2
Fwd: Fedora 31 System-Wide change proposal: Automatic R runtime dependencies
FYI, I plan on implementing this for F31 if no issues arise.
---------- Forwarded message ---------
From: Ben Cotton <bcotton at redhat.com>
Date: Tue, 2 Jul 2019 at 10:55
Subject: Fedora 31 System-Wide change proposal: Automatic R runtime dependencies
To: <devel-announce at lists.fedoraproject.org>, Development discussions
related to Fedora <devel at lists.fedoraproject.org>