similar to: Installation of qtiplot in Centos 7

While builds and validations of R-1.6.2beta_2002-12-20 were successful on several systems, there were a few failures: ------------------------------------------------------------------------ Apple Darwin 6.2 (MacOS 10.2.2) with gcc-3.2.1: gcc -dynamiclib -flat_namespace -undefined suppress -o .libs/libgslcblas.0.0.0.dylib sasum.lo saxpy.lo ... isamax.lo izamax.lo xerbla.lo -lc -install_name

I tried to dynamically load a c++ function. Everything seems to be OK when dyn.load() is executed but then I get this error Error in .C("integral", sumInMean, sumInVar, boundError, numberSampleClasses, : C/Fortran function name not in load table The code of the function is something like this: #include <cmath> extern "C" { #include

Following the recommendation of Prof. Ripley, I have created the Makevars file with the line: PKG_LIBS="-L/usr/lib/libm -lm -L/usr/local/lib/libgsl -lgsl -L/usr/local/lib /libgslcblas -lgslcblas" in the working directory. Now I have the code file Example3.c which computes the Bessel function value (the example is taken from the GSL reference book). I am running: R CMD SHLIB Example3.c

hi all, Am new to R. I am having problems installing Bioconductor package in R on fedora core 4 running on AMD64 bit machine. this is the error message I get : gcc -shared -L/usr/local/lib -o affyPLM.so avg_log.o biweight.o chipbackground.o common_types.o do_PLMrlm.o do_PLMrma.o do_PLMthreestep.o idealmismatch.o LESN.o lm.o lm_threestep.o log_avg.o matrix_functions.o

I see very strange behaviour. I am linking to LLVMMCJIT and I #include MCJIT.h. I can see in the debugger that MCJIT::Register is being called. If I break in ExecutionEngine::create, I can see that UseMCJIT is true and ExecutionEngine::MCJITCtor is non-zero. Still at this point (lines after 481): if (UseMCJIT && ExecutionEngine::MCJITCtor) { ExecutionEngine *EE =

Processing commands for control at bugs.debian.org: > severity 564845 important Bug #564845 [acl2] acl2: ftbfs with gcc-4.5 Severity set to 'important' from 'normal' > severity 564850 important Bug #564850 [agave] agave: ftbfs with gcc-4.5 Severity set to 'important' from 'normal' > severity 564853 important Bug #564853 [amule] amule: ftbfs with gcc-4.5

Processing commands for control at bugs.debian.org: > tag 564974 + sid wheezy Bug #564974 [cyphesis-cpp] cyphesis-cpp: ftbfs with gcc-4.5 Added tag(s) wheezy. > tag 565026 + sid wheezy Bug #565026 [libfreebob] libfreebob: ftbfs with gcc-4.5 Added tag(s) wheezy. > tag 565051 + sid wheezy Bug #565051 [synopsis] synopsis: ftbfs with gcc-4.5 Added tag(s) wheezy. > tag 565068 + sid wheezy

The error message mentions (perhaps not very clearly) that the shared library installed with the gsl R package could not be loaded. Chances are that the gsl package (and as a consequence the copula package, too) didn't work before you upgraded. This can happen e.g. if the dependent system library (libgsl-dev?) is upgraded. update.packages() doesn't try to load any packages, which

Dear all, I'm new to R and am trying to create a dll in order to be able to use the "dyn.load". I work with some examples and its works fine. Now, I would like to create a dll that use a lib (libgsl.a). I have linked its in a main c program and its works fine too. How can I instruct rcm ... to include this lib??? The .h file is in mingw\include\gsl and I put #include

I have just upgraded to the latest R (3.3.2) and thought I should update my library of contributed packages. Ran into problems with "copula". Got the error: > Error in dyn.load(file, DLLpath = DLLpath, ...) : > unable to load shared object '/home/rolf/Rlib/gsl/libs/gsl.so': > libgsl.so.0: cannot open shared object file: No such file or directory So after a bit

Hi, I am writing a function in C that is meant to be called by R. In the C function, I used a gsl function gsl_stats_mean. The code is as simple as below void gsl(double *m, int *dim){ int r, c; r = dim[0]; c = dim[1]; double mean = gsl_stats_mean(&m[0], 1, r); Rprintf("mean = %f\n", mean); } The C code is succesfully compiled and the output is as follows. $ R CMD SHLIB

On 01/11/16 21:08, Kirill M?ller wrote: > Did you reinstall the gsl package [1]? Apparently not. I did a complete update.packages() which reinstalled a great number of packages (I have a great number in my personal library). There were complaints about 4 packages, one of which was "copula", but "gsl" was not one of them. I would have *thought* that if "gsl"

Can someone tell me why this is since I can't seem to find an explination in the docs or FAQ for this. Since there are no "BM" in the mtrs data.frame, but only in the "parent" data.frame (trees), I'm assuming the subset data.frame is still associated with the original. Is that correct and how would I create a completly separate data.frame since I'll be using by,

...i don''t know what to do! obviously, this is probably more simple than what i''m going through now(at least i can say i dear hope so) but i''m having a terrible time trying to use cookies[:something]... explination: i have already implement a nice working cute forum, and i was hoping to put the client/forum-user''s username and email into the corresponding

Hi, i was hoping someone could reffer me to a doc or an explination (i haven''t found anything) for rendering a partial via an ajax request - - i know i could probably do it via link_to :action => x and then def x render_partial ''y'' end but i was hoping ther was something simpler, and more rails-like caller such as render_ajaxed_partial

I've had a dedicated box running for ages in my LAN without any kind of problems. Ssh has been installed and useable till tomorrow when a problem pop up. KERNEL: 2.6.5 no server or client settings have been changed. I can ping and nmap the host without any kind of problems. Bellow I'll paste a verbosed ssh try. bkw at tellus ~ $ ssh -vvv neptune OpenSSH_3.8p1, SSH protocols 1.5/2.0,

Running the example in the documentation causes R to crash. dario at bioinfo:~$ R R version 3.0.3 (2014-03-06) -- "Warm Puppy" Copyright (C) 2014 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or

Hi Zed, > > NoMethodError in Profiles#change_interests > > private method `equal?'' called for #<Interest:0xb767ae8c> > > On another box with the same mongrel gem versions, it works fine. A > > week later I''m asking in desperation, what have I broken?! > If it works in one place, but not in another, then you have to find out what the difference

Good day, I am facing a problem when I am installing the dynamo-package and loading it. After I installed the package, I received the following warning message: "In file.create(f.tg) : cannot create file 'C:\PROGRA~2\R\R-28~1.1/doc/html/packages.html', reason 'Permission denied'" and when I load the package, an error message pops up saying that "the application

Dear R-list people, I asked a similar question a few hours before. I will try to be more specific. We like to add the GSL library to the file SHLIB in order to make it possible to run the C code using GSL functions from R. We read that the path to the libgsl.a should be added to the line shlib_libadd=' ' in the file SHLIB but it does not work on our system. Dyn.load fails with error