similar to: par(mfrow) for heatmap plots

The answer is "don't do that" because that function abuses par. Use lattice or ggplot2 with grid graphics to plot multiple heatmaps. https://stackoverflow.com/questions/15114347/to-display-two-heatmaps-in-same-pdf-side-by-side-in-r -- Sent from my phone. Please excuse my brevity. On July 23, 2017 5:11:32 AM PDT, Brian Smith <bsmith030465 at gmail.com> wrote: >Hi, >

I would like to use gridBase to place four separate heatmaps (actually, a stripped-down heatmap.2 from ght gregmisc package that contains only the "image" part) into four different viewports. I can get the placement correct, but I keep 'losing' the previous plot. Any suggestions? Here is some quick example code trying to put a heatmap into the left viewport and then

Hello all, I'm trying to write a function that produces a main plotting region with several square plots along the right side. Ideally the size of right side plots will scale only with the height of the entire plot, yet never overlap with another secondary plot. The following two snippets get close, however, as I resize the plot horizontally the right side plots (green squares) get smaller

Hi, I'm trying to customize a window with 2 graphs. I'm able to do the first one with something like this general example par(mfrow=c(1,2),cex.axis=0.85,cex.lab=0.80,mai=c(1.3,1,0.5,0),las=3) bplot<-barplot(bar.values,names.arg=cf.names,width=0.5,ylab="% Area held") abline(h=0.3,lty=3,col="red") abline(h=0.1,lty=3,col="blue")

Hi everyone. I want to solve the following problem. I have a data.frame and I create a dotplot using lattice. Then I want to use the grid-package to create a combined graphic which contains the dotplot as well as a textplot() (using package gplots) of the data.frame next to the dotplot. Example code: library(lattice) library(grid) library(gplots) xx <- data.frame(f=factor(rep(1:5, each=5)),

I have dose response data I have analyzed with the 'drc' package. Using plot() works great. I want to arrange my plots and source data on a single page. I think 'gridExtra' is the usual package for this. I could use plot() and par(mfrow=...), but then I can't put the source data table on the page. gridExtra provides grid.table() which makes nice graphical tables. It

Dear colleagues I'm using data that looks like .test and .test1 below to draw two mosaic plots with cell labelling (the row percentages from the tables). When I take out the pop=FALSE commands in the mosaic commands and comment out the two lines labelling the cells, then the plots are laid out exactly as I'd like: side-by-side. But I do require the cell labelling and the pop=FALSE

Hi, I'm trying to get 2x2 (or other layouts) of cd_plot from the vcd package. I have tried the usual commands like layout, par(mfrow...) etc and but cd_plot seems to ignore them and send the plotting window back to 1x1. I have also tried turning off the pop and newpage options in cd_plot but I still can't get multiple cd_plots into a plotting window. Any suggestions would be greatly

On Fri, 18 May 2018, Ed Siefker wrote: > I have dose response data I have analyzed with the 'drc' package. > Using plot() works great. I want to arrange my plots and source > data on a single page. I think 'gridExtra' is the usual package for > this. > > I could use plot() and par(mfrow=...), but then I can't put the source > data table on the page. >

I am setting up base plots -- one in viewport A and and one in B. This part works fine. But if I go back to A after having done B and add horizontal lines it seems to not use the correct coordinates. How do I tell it to resume using A's coordinates? I am already using par(fig = gridFIG()) but it seems that that's not enough to reestablish them. What happens is that when I go back to

I am setting up base plots -- one in viewport A and and one in B. This part works fine. But if I go back to A after having done B and add horizontal lines it seems to not use the correct coordinates. How do I tell it to resume using A's coordinates? I am already using par(fig = gridFIG()) but it seems that that's not enough to reestablish them. What happens is that when I go back to

Hi all, I'm trying to generate a plot containing a scatterplot, with marginal densityplots for x and y. However, when I try to generate a vertical densityplot, I get the message "warning: can't clip to rotated viewport", and nothing shows up. I'm probably misunderstanding how viewports are meant to be used, so if someone could give me a hint, I'd be most grateful. my

hello, the example below does not work. (i know it's not supposed, but it makes it clear what i'm trying to achieve) par(mfrow=c(2,1)) xyplot(y~x2|x1,data=dataframe1,pch=20) xyplot(y~x2|x1,data=dataframe2,pch=20) i know i could probably merge the two datasets and do something like xyplot(y~x2|x1+dataset,data=merged) any other suggestion? thanks. [[alternative HTML version deleted]]

Dear R-users, I have got the following problem. I need to create 4x2 arrays of xyplot's on several pages. The plots are created within a loop and plotted using the print function. It seems that I cannot find the proper grid syntax with my viewports, and the more/newpage arguments. The following script is a simplification but hopefully will suffice to illustrate my problem. Any suggestion

platform x86_64-unknown-linux-gnu arch x86_64 os linux-gnu system x86_64, linux-gnu status major 2 minor 6.2 year 2008 month 02 day

I'm using R to create a heatmap from a matrix using heatmap.2 - and i want to group these images into one big image - What i usually use to achieve this is layout() - but this doesn't work, as heatmap.2 uses layout, and apparently layout does not work recursively. Does anyone have any suggestions on how to group together 2 images without layout, or how to make layout support recursive

Hello, I'm trying to follow the documentation of how to use gridBase, and I've reached the minimal code example below as my best effort. Can someone explain how to keep the column of boxplots on the same page as the rectangles (even though I've tried new = TRUE) ? Also, would it be hard / possible to match up the middle of each boxplot to the middle of each rectangle ?

Hi, ? Is there some easy way to split the grid.newpage() into two columns? For example, how could I put the two forest plots below (meta1 and meta2) next to each other? library(meta) data(Olkin95) meta1 <- metabin(event.e, n.e, event.c, n.c,data=Olkin95, subset=c(41,47,51,59),sm="RR", meth="I",studlab=author) meta2=meta1 meta2$studlab=rep("",length(meta1$studlab)

Hello, I am trying to plot a few correlograms on the same figure, with the function corrgram() from the package corrgram. However, the function does not seem to use the base graphic system, as setting out the multiple figure layout with, e.g., par(mfrow=c(2, 2,)) does not work. Does anybody know a workaround for this? Many thanks in advance for any advice best giuseppe -- Giuseppe Pagnoni,

Hi, I m working on R and read one image with russian font using readjpeg() function and write it on pdf (using grid). But russian text is not visible on pdf. How can i fix my pblm? Regards <http://r.789695.n4.nabble.com/file/n4650417/pointer.jpg> library(JPEG) library(grid) pdf("out.pdf" , width = 6.6 ,height = 4.2,family= "URWHelvetica", encoding="KOI8-R")