similar to: Distributions for gbm models

Displaying 20 results from an estimated 1000 matches similar to: "Distributions for gbm models"

2009 Jun 17
1
gbm for cost-sensitive binary classification?
I recently use gbm for a binary classification problem. As expected, it gets very good results, based on Area under ROC with 7-fold cross validation. However, the application (malware detection) is cost-sensitive, getting a FP (classify a clean sample as a dirty one) is much worse than getting a FN (miss a dirty sample). I would like to tune the gbm model biased to very low FP rate. For this
2006 May 27
2
boosting - second posting
Hi I am using boosting for a classification and prediction problem. For some reason it is giving me an outcome that doesn't fall between 0 and 1 for the predictions. I have tried type="response" but it made no difference. Can anyone see what I am doing wrong? Screen output shown below: > boost.model <- gbm(as.factor(train$simNuance) ~ ., # formula +
2006 May 25
0
boosting
Hi I am using boosting for a classification and prediction problem. For some reason it is giving me an outcome that doesn't fall between 0 and 1 for the predictions. I have tried type="response" but it made no difference. Can anyone see what I am doing wrong? Screen output shown below: > boost.model <- gbm(as.factor(train$simNuance) ~ ., # formula +
2013 Jun 23
1
Which is the final model for a Boosted Regression Trees (GBM)?
Hi R User, I was trying to find a final model in the following example by using the Boosted regression trees (GBM). The program gives the fitted values but I wanted to calculate the fitted value by hand to understand in depth. Would you give moe some hints on what is the final model for this example? Thanks KG ------- The following script I used #----------------------- library(dismo)
2008 Mar 05
0
Using tune with gbm --grid search for best hyperparameters
Hello LIST, I'd like to use tune from e1071 to do a grid search for hyperparameter values in gbm. However, I can not get this to work. I note that there is no wrapper for gbm but that it is possible to use non-wrapped functions (like lm) without problem. Here's a snippet of code to illustrate. > data(mtcars) obj <- >
2009 Jul 10
1
help! Error in using Boosting...
Here is my code: mygbm<-gbm.fit(y=mytraindata[, 1], x=mytraindata[, -1], interaction.depth=4, shrinkage=0.001, n.trees=20000, bag.fraction=1, distribution="bernoulli") Here is the error: Error in gbm.fit(y = mytraindata[, 1], x = mytraindata[, -1], interaction.depth = 4, : The dataset size is too small or subsampling rate is too large: cRows*train.fraction*bag.fraction <=
2014 Jul 02
0
How do I call a C++ function (for k-means) within R?
I am trying to call a C++ k-means function within R and I am struggling. I know that the below code is used to call a C++ function for gbm but how do I do it for k-means? gbm.obj <- .Call("gbm", Y=as.double(y), Offset=as.double(offset), X=as.double(x), X.order=as.integer(x.order),
2013 Mar 24
3
Parallelizing GBM
Dear All, I am far from being a guru about parallel programming. Most of the time, I rely or randomForest for data mining large datasets. I would like to give a try also to the gradient boosted methods in GBM, but I have a need for parallelization. I normally rely on gbm.fit for speed reasons, and I usually call it this way gbm_model <- gbm.fit(trainRF,prices_train, offset = NULL, misc =
2010 Feb 28
1
Gradient Boosting Trees with correlated predictors in gbm
Dear R users, I’m trying to understand how correlated predictors impact the Relative Importance measure in Stochastic Boosting Trees (J. Friedman). As Friedman described “ …with single decision trees (referring to Brieman’s CART algorithm), the relative importance measure is augmented by a strategy involving surrogate splits intended to uncover the masking of influential variables by others
2010 Apr 26
3
R.GBM package
HI, Dear Greg, I AM A NEW to GBM package. Can boosting decision tree be implemented in 'gbm' package? Or 'gbm' can only be used for regression? IF can, DO I need to combine the rpart and gbm command? Thanks so much! -- Sincerely, Changbin -- [[alternative HTML version deleted]]
2005 Apr 25
1
Failed to install gbm_1.4-2 (PR#7814)
Full_Name: The Manager Version: 2.0.1 OS: Solaris 9 Submission from: (NULL) (129.67.80.243) > install.packages("gbm") trying URL `http://cran.uk.r-project.org/src/contrib/PACKAGES' Content type `text/plain; charset=ISO-8859-1' length 52975 bytes opened URL ================================================== downloaded 51Kb trying URL
2008 Sep 22
1
gbm error
Good afternoon Has anyone tried using Dr. Elith's BRT script? I cannot seem to run gbm.step from the installed gbm package. Is it something external to gbm? When I run the script itself <- gbm.step(data=model.data, gbm.x = colx:coly, gbm.y = colz, family = "bernoulli", tree.complexity = 5, learning.rate = 0.01, bag.fraction = 0.5) ... I
2003 Jul 14
0
package announcement: Generalized Boosted Models (gbm)
Generalized Boosted Models (gbm) This package implements extensions to Y. Freund and R. Schapire's AdaBoost algorithm and J. Friedman's gradient boosting machine (aka multivariate adaptive regression trees, MART). It includes regression methods for least squares, absolute loss, logistic, Poisson, Cox proportional hazards/partial likelihood, and the AdaBoost exponential loss. It handles
2003 Jul 14
0
package announcement: Generalized Boosted Models (gbm)
Generalized Boosted Models (gbm) This package implements extensions to Y. Freund and R. Schapire's AdaBoost algorithm and J. Friedman's gradient boosting machine (aka multivariate adaptive regression trees, MART). It includes regression methods for least squares, absolute loss, logistic, Poisson, Cox proportional hazards/partial likelihood, and the AdaBoost exponential loss. It handles
2009 Apr 07
0
gbm for multi-class problems
Dear List, I´m working on a classification problem. My response has 60 levels. I`m very interested in boosted trees like AdaBoost or gradient boosting machine as implemented in the package "gbm". Unfortunately gbm is only applicable for 2-class problems. Is anybody out there who can help me? Is there a way to use gbm() for multi-class problems? Maybe there is a way to transform my
2008 Sep 18
1
caret package: arguments passed to the classification or regression routine
Hi, I am having problems passing arguments to method="gbm" using the train() function. I would like to train gbm using the laplace distribution or the quantile distribution. here is the code I used and the error: gbm.test <- train(x.enet, y.matrix[,7], method="gbm", distribution=list(name="quantile",alpha=0.5), verbose=FALSE,
2018 Feb 19
3
gbm.step para clasificación no binaria
Gracias Carlos. Hasta donde yo entiendo si las hay: El argumento family puede ser: "gaussian" (for minimizing squared error); por lo que tiene que ser numérica "bernoulli" (logistic regression for 0-1 out-comes); binaria por narices "poisson" (count outcomes; requires the response to be a positive integer); numérica también, pues. La única podría ser
2012 Sep 16
2
Where is the R configuration file or how to override R compilers
I have a question about how one can modify or override the compilers that R uses for package installations? Or if perhaps this configuration is in some editable file somewhere. Initially I built the version of R 2.15.1 on Solaris SPARC (virtual T4), but found out the build was done as 32 bit. After some research, I found that the pre-compiled GCC version I had only allowed for 32 bit. I wanted
2018 Feb 19
3
gbm.step para clasificación no binaria
Hola de nuevo. Se me olvidaba la principal razón para utilizar gbm.step del paquete dismo. Como sabéis, los boosted si sobreajustan (a diferencia de los random forest o cualquier otro bootstrap) pero gbm.step hace validación cruzada para determinar el nº óptimo de árboles y evitarlo. Es fundamental. La opción que me queda, Carlos, es hacerlo con gbm, pero muchas veces, y usar el
2012 Jul 23
1
mboost vs gbm
I'm attempting to fit boosted regression trees to a censored response using IPCW weighting. I've implemented this through two libraries, mboost and gbm, which I believe should yield models that would perform comparably. This, however, is not the case - mboost performs much better. This seems odd. This issue is meaningful since the output of this regression needs to be implemented in a