similar to: ggplot2

Hi James, If you want to specify the y-values, you need to use stat="identity" as below: ggplot(probability, aes(x=Fertilizer, y=prob)) + geom_bar(stat="identity", aes(fill=Treatment)) best, huzefa On Tue, Apr 12, 2016 at 1:02 PM, James Henson <jfhenson1 at gmail.com> wrote: > Dear R Community, > > Below is a problem with a simple ggplot2 graph. The code

Hello R Community, I inadvertently updated packages via R Studio when a package was open. Now when R Studio is opened the message below appears in the console panel. Error in loadNamespace(name) : there is no package called ?yaml? Error in loadNamespace(name) : there is no package called ?yaml? When running R code, so far the only function that has not worked is datatable () in the ?DT?

> On Dec 7, 2017, at 10:47 AM, James Henson <jfhenson1 at gmail.com> wrote: > > Hello R Community, > > I inadvertently updated packages via R Studio when a package was open. Now > when R Studio is opened the message below appears in the console panel. > > Error in loadNamespace(name) : there is no package called ?yaml? > > Error in loadNamespace(name) :

Sorry for bothering you - but I have a little problem. I`m completely new in R and trying to use lmer. That works, but I m not sure if my code is right, so I would just like to get an opinion from the experts. I have a Growthrate of plants (RGR Fixed Factors: Fertilizer, Status (alien or native plants) and their interaction Random Factors: Age is a covariable; than I have plantfamily and

Hello R-help, I'm studying an example in the R book.? The data file is available from the link below.http://www.bio.ic.ac.uk/research/mjcraw/therbook/data/fertilizer.txt Could you explain Why the results from lme() and lmer() are different in the following case? In other examples, I can get the same results using the two functions, but not here...? Thank you.Miya library(lme4)library(nlme)#

Hi all, I analysed my data with lme and after that I spent a lot of time for mean separation of treatments (post hoc). But still I couldn’t make through it. This is my data set and R scripts I tried. replication fertilizer variety plot height 1 level1 var1 1504 52 1 level1 var3 1506 59 1 level1 var4 1509 54 1 level1 var2 1510 48 2 level1 var1 2604 47 2 level1 var4 2606 51 2 level1 var3

Dear R folk, First off I want to thank those of you who responded with comments for my R quick and dirty stats tutorial. They've been quite helpful, and I'm in the process of revising them. When it comes to repeated measures MANOVA, I'm in a bit of a bind, however. I'm beginning to see that all of the documentation is written for psychologists, who have a slightly

r-help at stat.math.ethz.ch on Wednesday, October 26, 2005 at 6:00 AM -0500 wrote: Ronaldo, Try Harold's suggestion. The df still won't agree, because lmer (at least in its current version) just puts an upper bound on the df. But that should be OK, because all those t tests are approximations anyways, and you can get better confidence intervals (credible intervals, whatever) by using the

Hello everyone I am currently trying to conduct analysis of my graduate thesis data using a mixed effects model and I have reached an impass. When I try to conduct a multiple comparison, I get an error (See below): > fm3<- lme(abovegroundbiomass.m.2~medium*amelioration*fertilizer*treatment, random=~1|block/medium/amelioration/fertilizer) > tukeytest<-glht(fm3,

Hi there, I have a experimental design related question. I have done a experiment with 3 factors. The design matrix is similar to: > data.frame(Factor.1 = rep(rep(0:2, each = 3),3), Factor.2 = rep(c("U","S","N"), 9), Factor.3 = rep(0:2, each = 9)) Factor.1 Factor.2 Factor.3 1 0 U 0 2 0 S 0 3 0 N

Hi everyone! I tried to look up in the previous topics whether there was something similar to my question but I think there's nothing corresponding... Anyway! Here is my problem: I have a plot (qplot()) in which I want to insert axis labels with the following text: kg NH4+ N-equiv. * ha-1 yr-1 (well... 4 smaller and down and + as a power (the same for the -1) but I am sure you understood

Hi, I have this: lme(y~x1+x2,random=~1|x1/x2) How to make this random effect using lmer? I try this: lmer(y~x1+x2+(1|x1/x2) But it dont work. Any idea? Thanks Ronaldo -- System halted! -- |> // | \\ [***********************************] | ( ?? ?? ) [Ronaldo Reis J??nior ] |> V [UFV/DBA-Entomologia ] | / \ [36570-000 Vi??osa -

Hi! How to calculate the correct SE of mean in a nested or spliplot anova? Nested example: --------------------- m <- aov(Glycogen~Treatment+Error(Treatment/Rat/Liver)) > m Call: aov(formula = Glycogen ~ Treatment + Error(Treatment/Rat/Liver)) Grand Mean: 142.2222 Stratum 1: Treatment Terms: Treatment Sum of Squares 1557.556 Deg. of Freedom 2 Estimated

We are looking for a replacement enterprise file system to handle storage needs for our campus. For the past 10 years, we have been happily using DFS (the distributed file system component of DCE), but unfortunately IBM killed off that product and we have been running without support for over a year now. We have looked at a variety of possible options, none of which have proven fruitful. We are

I''m currently prototyping a Solaris file server that will dish out user home directories and group project directories via NFSv4 and Samba. I have samba configured and integrated into our local active directory, with ACL mapping working. I''m a little confused as to the behavior of the ZFS ACL though. on a brand-new filesystem, touching a file results in: -rw-r--r-- 1 root

I'm trying to get Samba 3.0.28 to work as an MS Dfs root providing a share that links home directories to the actual servers they reside on. Unfortunately, when I access the share from a Windows XP client, and try to open one of the directories, the client gives an error that it "refers to a location that is unavailable". I've done a lot of searching, and found a number of

or in base R : ?xtabs ?? as in: xtabs(~previous_location + current_location,data=x) (You can convert the 0s to NA's if you like) Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Tue, May 8, 2018 at 9:21 AM, Huzefa

file { "/var/log/syslog": target => "/var/log/messages" } generates the following error: err: //henson/stanford/syslog/file=/var/log/syslog: Failed to retrieve current state: undefined method `should'' for false:FalseClass

Dear Bert and Huzefa, Apologies for the late reply, my account got hacked and I have just managed to recover it. Thank you very much for your replies and the solutions. Both work well. I was wondering if there was any way to ensure (force) that all possible combinations show up in the output. The full dataset has 25 cities but of course people have not moved from Boston to all the other 24

Instead of Tsp = c(2016, 2018, 12) try Tsp = c(2016, 2018.25, 12) Hence, you can specify the object as structure(c(5973156.76, 5159011.2, 6695766.64, 6365359, 6495218.53, 7226302.39, 6835272.7, 7383501.57, 6962748.19, 7623278.72, 7274994.33, 7919421.8, 7360740.81, 7436693.35, 8545765.55, 7337269.76, 8180585.44, 8376635.05, 7758261.24, 10374641.22, 8000314.11, 9114958.9, 9805149.15,