similar to: How to install Vennerable

Dear R-users I want to save a list with characters a point plot and a Venn diagram in a single pdf page. I am successful to do this when I use a character list and two point plots. However when I try to replace the first point plots with my Venn diagram (built with Vennerable package, compute.Venn() and plot.Venn()) the Venn plot will not position at the right place in the pdf. I guess there

I was wondering if you could lend me some advice in using the Vennerable package. I am having trouble creating the right sort of Venn function output. I have "TRUE" and "FALSE"/NA str(mutset) 'data.frame': 2310 obs. of 3 variables: $ TestResult.1 : chr NA NA NA NA ... $ TestResult.2 :chr NA NA NA NA... $ TestResult.3

Dear List, I would like to modify the settings for plotting a Vennerable object, but I don't know how...so if anyone has an idea I would be really graetfull. best, Fabian some R code to illustrate my problem: #### library(Vennerable) ven <- compute.Venn(Venn(SetNames=c("A", "B"), Weight=c(0,111,106, 26))) # now my problem is that whenever I plot the object, the

Hi, I'm new to the list so apologies if this has been asked before. I couldn't find any refs in google. I recently installed the Vennerable library from Rforge, this required an upgrade of R to 2.10.0 by the 'pylr' dependency. However, a very simple command fails: Vcomb <- Venn(SetNames= c("EOCT", "EOCM"), Weight=c(0, 11841, 24084, 24660)) plot(Vcomb)

Dear r-helpers, Here I would like to have your kind helps on generating Venn diagram. There are some packages within R on this task, like venneuler, VennDiagram, vennerable. But, vennerable can not be installed on my Mac book. It seems VennDiagram can not work on my data. And, venneuler may have generated a wrong Venn diagram to me. Do you have any experience/expertise on those Venn diagram?

Hi all, I am trying to plot a venn diagram using vennDiagram in limma package, but I have no idea how to have it colorful such as the color one created by the following website: http://www.pangloss.com/seidel/Protocols/venn.cgi. Any one has any advice? Thanks, D.

I was wondering if anyone could help me figure out how to make a Venn diagram in R where the circles are scaled to the size of each dataset. I have looked at the information for venn (in gplots) and vennDiagram (in limma) and I cannot seem to figure out what parameter to change. I have looked this up online and do not seem to be seeing anyone else who has posted this question or the answer to it

Hi, Field RdMacros was introduced in file DESCRIPTION to allow users to import LaTeX-like macros from other packages. Currently 'R CMD Check --as-cran' gives a NOTE: > Unknown, possibly mis-spelled, field in DESCRIPTION: > ?RdMacros? A small package demonstrating this is available at http://www.maths.manchester.ac.uk/~gb/testRdMacro_0.0.2.tar.gz (and this is the source:

In that scenario, I would expect that QCA would suggest Venn and Venn would suggest QCA. Then there's no circular dependency problem. Hadley On Fri, Apr 8, 2016 at 6:59 AM, Adrian Du?a <dusa.adrian at unibuc.ro> wrote: > Hi Mark, > > Uhm... sometimes this is not always possible. > For example I have a package QCA which produces truth tables (all > combinations of

In http://finzi.psych.upenn.edu/R/Rhelp02a/archive/14637.html some rudimentary R functions were given for drawing proportional area venn diagrams with area of each intersection ~ the count in a 2 x 2 x 2 table. I'm interested in this, for another application: showing the correlations among Y, X1, X2 using area ~ r^2 of each pair (sometimes called a Ballantine diagram). Before I attempt

I need to generate venn diagrams for some of my data. I am using the venn library. Is there a function that generates the ids and attributes that I can pass on to venn Library(venn) ids <- c(1,1,1,2,2,2,3,3,3,4,4,5,5,5,6,6,7,8,9,10) attributes <-

Well, I'm not saying that Dmitri _should_ do it. I merely mention it as an option that I think is worth thinking about -- it is easy to overlook the obvious :-). Since we have no further info on the package's structure we can't be sure.. Op vr 8 apr. 2016 om 13:59 schreef Adrian Du?a <dusa.adrian at unibuc.ro>: > Hi Mark, > > Uhm... sometimes this is not always

Another, perhaps slightly off the wall reframing of the 3-package possibility: Have packages B, a, and UserFacingA, as follows *a* contains all the functionality in your A package that *does not depend on B* *B* *imports from* *a* and is essentially unchanged *UserFacingA* *Depends* on *a* and *imports from* *B*, it implements all functionality from your package A that *does depend on* *B*, and

A third possibility, which I use in my gtools and gdata packages, is to use soft-links to create a copy of the relevant functions from one package in the other. I make sure these functions are *not* exported, so no conflicts are created, and the use of soft-links mean the code never gets out of sync. -Greg -- Change your thoughts and you change the world. --Dr. Norman Vincent Peale > On

Thanks all, I don't know either (for the moment). It's all in the design phase still. Generally, I would also like to keep specific functions in specific packages, if at all possible. On Fri, Apr 8, 2016 at 3:03 PM, Mark van der Loo <mark.vanderloo at gmail.com> wrote: > Well, I'm not saying that Dmitri _should_ do it. I merely mention it as an > option that I think is

Hi Mark, Uhm... sometimes this is not always possible. For example I have a package QCA which produces truth tables (all combinations of presence / absence of causal conditions), and it uses the venn package to draw a Venn diagram. It is debatable if one should assimilate the "venn" package into the QCA package (other people might want Venn diagrams but not necessarily the other QCA

I'm trying to get my figure to open with R, but it does not come up. Here is my standard code: venn.diagram( x = list( KP2 = c(2, 62, 22, 33, 11, 36, 26, 27, 28, 64, 5, 66, 10, 18, 68, 61, 6, 29, 19, 65, 30, 35, 32, 20, 69, 8, 31, 13, 21, 7), KP15 = c(2, 22, 39, 1, 14, 65, 67, 68, 1, 12, 23, 37, 4, 24, 25, 64, 52, 34, 9, 15, 13, 8, 16, 63, 3, 17), KP43 = c(39, 2, 49, 43, 51, 38, 56,

Hello there, Does anyone know how to plot venn diagrams in R? Ive searched the mail archive lists but to no avail. Regards, Wayne Jones KSS Ltd Seventh Floor St James's Buildings 79 Oxford Street Manchester M1 6SS England Company Registration Number 2800886 Tel: +44 (0) 161 228 0040 Fax: +44 (0) 161 236 6305 mailto:kssg@kssg.com http://www.kssg.com The information in this

Hi, I am using venn diagram function in AMDA to plot the venn diagram. But it seems in this function, it can only plot 3 or less vectors. Is there a way to plot the venn diagram with more than 3 vectors? Please help. Thanks. Z --------------------------------- [[alternative HTML version deleted]]

I'm trying to plot Venn diagrams with more than 3 sets (5 actually) in order to describe graphically the genetic variation between populations. I tried the limma library but realised it can only plot 3 sets. Is there any solution? Of course I could plot the chart manually but it'll take too long (have other datasets)..... One of my dataset is given below. THanks for any advice. j