similar to: RJAGS Installation Issues

Hi, With the sid package jags (2.0.0-1) and r-base-core (2.11.0-1), I cannot install package rjags anymore (this used to work at some point; can't recall exactly at what R/JAGS versions): ---<--------------------cut here---------------start------------------->--- R> install.packages("rjags", configure.args="--with-jags-modules=/usr/lib/JAGS/modules-2.0.0")

Hello, I am trying to install rjags on R 3.0.0 that is running on CentOS 6.4. Jags is installed and seems to be working correctly. I get the following error when trying to install from source or CRAN, configure: error: "Problem with header file /usr/include/JAGS/Console.h " See `config.log' for more details JAGS was intalled with an rpm. Does not look like the rpm included

Hello folks Earlier versions of jags and rjags installed on my system without any difficulty, but I'm having trouble with jags version 4.3.0-1ubuntu2~ubuntu14.04.1~ppa1 (from Michael Rutter's R ppa) and rjags version 4.6. The call to install.packages() I always used successfully now produces the error "cannot link to JAGS library in /usr/lib/x86_64-linux-gnu."? shown below

Trying to install latest rjags (3-5) from CRAN with JAGS 3.2.0 installed on Ubuntu 10.04, with r-devel ... the bottom line is that it fails while loading with /libs/rjags.so: undefined symbol: _ZN7Console15checkAdaptationERb Has anyone else seen this or is it a glitch somewhere in my system? thanks Ben Bolker ================== bolker at ubuntu-10-new:~/R/pkgs/rjags$ jags Welcome to

Hi, Here is a step-by-step guide to exactly how I've installed R in Ubuntu: http://www.nabble.com/installing-R-on-Ubuntu-td10025949.html#a21894865 Regarding rjags, here is what happened: This webpage (http://yusung.blogspot.com/2009/01/install-jags-and-rjags-in-fedora.html) recommends logging into R as sudo R, and then typing: install.packages("rjags",

Hi, I'm trying to install rjags and R2jags with R version 2.14.1 (2011-12-22) on Linux Mint 12 machine using software repository: deb http://cran.fhcrc.org/bin/linux/ubuntu oneiric/ jags seems to install OK, but rjags gives a weird error about not finding fprec symbol. Here is a history of the problem including several attempts to work around it. (Because of Ben Bolker's recent

I have been having trouble with rjags on Ubuntu 10.04 > library(rjags) Loading required package: coda Loading required package: lattice linking to JAGS 3.2.0 module basemod loaded Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file) error: unable to load shared object '/usr/lib/JAGS/modules-3/bugs.so': /usr/lib/JAGS/modules-3/bugs.so:

Hi All: I get the following error when trying to install the rjags package. I've installed the jags software and I'm using Fedora 10.0 and my sessionInfo is at the bottom of this email. I'm also sorry if this email ends up having control A's all over it. I still haven't figured how to fix that. Thanks. [1] "LOADING MASS LIBRARY" checking for

Greetings, I wonder if anyone can offer any help or advice--even direction to an appropriate source of advice. I am trying to install rjags 1.0.1 on Mac OS X 10.5 (see http://www-fis.iarc.fr/~martyn/software/jags/). I have R.app 2.6.1 installed. JAGS 1.0.1 is apparently successfully installed. I (think I) know this because when I type 'jags' into Terminal, I get the following:

Hi all, I use the excellent packages rjags and cacheSweave, and unfortunately seem to have found an incompatibility between them. Below are a minimal .Rnw file and corresponding JAGS model file which illustrate the problem: *** JAGS model file; name=j.bug *** model { mu ~ dnorm(0,1.0E-5) sigma ~ dunif(0,100) for(i in 1:length(y)) { y[i] ~ dnorm(mu,sigma) } } *** *** .Rnw

Quick followup. Confirmed that TCl/Tk are both installed on the machine (they are, in both 32- and 64-bit flavours), as are all tcl and tk-related libs, devel packages, and about everything else I could find. It occurred to me that perhaps the R I compiled isn't 'tcltk' aware. I checked the config.log, and there is some hint that this might be the case. Just before ## File

While I have been able to install rjags on my Windows computer, oddly I have been unable to install rjags successfully on my 64-bit Linux compute server (etch, Linux kernel 2.6.18). I am required to specify the JAGS module directory upon installation; when doing this within R, I get:

I've not been able to install rjags successfully in Ubuntu 10.04 : ** testing if installed package can be loaded Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared library '/home/scott/R/i486-pc-linux-gnu-library/2.11/rjags/libs/rjags.so': libjags.so.2: cannot open shared object file:

Hi. I was trying to follow this rjags tutorial (example 1): http://www.johnmyleswhite.com/notebook/2010/08/20/using-jags-in-r-with-the-rjags-package/comment-page-1/#comment-19468 But when I try to run the following line in R, R crushes and close. jags <- jags.model('example1.bug', data = list('x' = x,'N' = N), n.chains = 4, n.adapt = 100) I'm using a Windows 64

Hello, In WinBUGS 1.4 manual (http://www.mrc-bsu.cam.ac.uk/bugs/winbugs/manual14.pdf), the gamma density is presented as dgamma(r,mu) where r and mu are the shape and rate parameters, respectively. In JAGS (rjags) manual version 1.0.2, May 9, 2008 (http://www-fis.iarc.fr/~martyn/software/jags/jags_user_manual.pdf), on page 26 the gamma density is presented as dgamma(mu,r) instead of dgamma(r,mu).

i've windows 7 64 bit operating system i run latest jags backage 2.2 i make set enviroment variable for JAGS_home because the rjags in r program couldn't see the JAGS sw now the error is the following: Error : .onLoad failed in loadNamespace() for 'rjags', details: call: inDL(x, as.logical(local), as.logical(now), ...) error: unable to load shared object 'D:/Program

Dear list members, I'm trying to use JAGS 2.1.0 from within R but every time I try to load the rjags package I receive the following message: Loading required package: coda Loading required package: lattice Error : .onLoad failed in loadNamespace() for 'rjags', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared library

I am trying to install rjags. Although I can install the library, I cannot load the package. See below. Here is my session > sessionInfo() R version 2.9.2 (2009-08-24) i386-pc-mingw32 locale: LC_COLLATE=English_United States.1252;LC_CTYPE=English_United States.1252;LC_MONETARY=English_United States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252 attached base packages: [1] stats

Hello, I have a fairly complex hierarchical model that I using rjags to fit. Short test runs verify that it works and everything appears to be setup correctly. Now that I want to collect a larger sample from the posterior (5,000 or more). This looks like it will take several days to run on my hardware (Intel core i7, 16GB RAM) I read in the rjags documentation that there is an option for

Greetings. Running Fedora Cora 8 on multi-Opteron system - full 32- and 64-bit libs installed (R compiled 64-bit on this machine). R 2.9.0 - libs sitting in /usr/local/lib64/R/library. Trying to install JAGS, with rjags. Partial success. For JAGS install: |./configure --with-jags-modules=/usr/local/lib/JAGS/modules --libdir=/usr/local/lib64 make make check make install Seems to work / no