similar to: R CMD check: Error in get("ptime", pos = "CheckExEnv") ...

This SO post: https://stackoverflow.com/q/76583828 describes a strange R CMD check error. Depending on the contents of a comment in one of the examples sections of a help page, an error like this could be triggered: > base::assign(".dptime", (proc.time() - get(".ptime", pos = "CheckExEnv")), pos = "CheckExEnv") >

I'm having a very hard time making R CMD check produce a clean check on examples because of the timings inserted into examples by R CMD check. I am getting a difference on every example output caused by timing information being inserted by 'R CMD check'. The current 'Writing R Extensions' manual[1] states on p. 14: If directory tests has a subdirectory Examples

In R version 2.6.1 (2007-11-26) and R version 2.6.1 Patched (2008-01-19 r44061) on openSUSE 10.2 (X86-64) > gctorture() > proc.time() Error: protect(): protection stack overflow The problem with this is that then R CMD check --use-gct foo ALWAYS FAILS with > cat("Time elapsed: ", proc.time() - get("ptime", pos = 'CheckExEnv'),"\n") Error in

Am 02.07.23 um 18:01 schrieb Duncan Murdoch: > This SO post: https://stackoverflow.com/q/76583828 describes a strange R > CMD check error. Depending on the contents of a comment in one of the > examples sections of a help page, an error like this could be triggered: > > > base::assign(".dptime", (proc.time() - get(".ptime", pos = >

Good morning, we recently observed a problem with importing S3 generics from a foreign package (without namespace), defining a S3 method in a package _with_ namespace and the `cleanEx()' function which is automatically generated and executed before examples are run by R CMD check. To be more precise. Package `strucchange' defines a S3 generic sctest <- function(x, ...)

Hi all, Today, i just installed the newest R version 2.10.1 and other necessary tools for building R package under windows,e.g. Rtools, perl. All are the newest version. After the correct configuration under windows, i use it to re-check my old package. I found the following prolem when checking EXAMPLE, which did not exist before this re-installation. ######## * checking examples ... ERROR

I have R v2.0.1 already running on the machine in question; a fairly generic Fedora Core 3 machine. I am trying to build the new version 2.1.0 and have not been able to troubleshoot the problem I encountered. I'm hoping someone else has seen it and can suggest a troubleshooting avenue to me. The build succeeds, both from the source RPM and from the tarball. I believed I had all the build

We have a customer with a system rejecting calls from Asterisk. It's indicating the ptime is 60, but the system admin is saying they only support 20. They are running asterisk 16.2.1 and using chan_sip Is there a way to specify this with chan_sip? Also, for my own curiosity, is there a way to specify this with PJSIP? (Trying to migrate customers to PJSIP, but we are holding until asterisk

Hello, I have been developing a package for phylogenetic analysis which I plan to submit to CRAN soon. It passes R CMD check with no warnings on my linux and Mac OS X machines. I don't have much experience with Windows and have been using the win-builder service to see how the package compiles on Windows. (Thank you for this service, Uwe, it is a huge time saver for me!) I have tried

Hello everybody, I am just trying to put together my first own CRAN-able package. I have completed the programming and my code works OK. But now when I perform R CMD check agsemisc_1.0-2.tar.gz and R gets to the step * checking examples ... I receive the following error message: > print(bwplot(Species~Sepal.Length, data=iris, panel=panel.bwstrip)) Error in rep(T, length(x)) : T used

Dear listers, I was used to package pgirmess under Windows with everything OK, but, for the first time, I had a trial this afternoon on Ubuntu 7.10 gutsy (I have a double boot computer and work more and more under unix) and R 2.7.0. Everything went OK except this: sudo R CMD check pgirmess ..... * checking examples ... ERROR Running examples in 'pgirmess-Ex.R' failed. The error most

On a SUN 280R running Solaris 9... The configure and make steps completed without errors. But when I try to perform the make check step, I get the following: $ make check FORCE=FORCE `Makedeps' is up to date. running code in 'base-Ex.R' ...*** Error code 1 make: Fatal error: Command failed for target `base-Ex.Rout' Current working directory /usr/local/R-2.0.0/tests/Examples ***

Hi, Is there such a thing? If no: is it easily simulated? thanks, Joh

Why is class(spectrum[["Ion"]]) after this "factor"? spectrum <- cbind(spectrum,Ion=rep("", nrow(spectrum)),Deviation.AMU=rep(0.0, nrow(spectrum))) slowly going crazy ... Joh

>From: Johannes Graumann <johannes_graumann at web.de> >Date: 2007/12/18 Tue PM 04:40:37 CST >To: r-help at stat.math.ethz.ch >Subject: [R] All anchored series from a vector? lapply(1:length(myvector) function(.length) { c(myvector[1}:myvector[.length]) }) but test it because i didn't. >Hi all, > >What may be a smart, efficient way to get the following result:

Dear R Gang: I have a Macintosh G4 powerbook, running OS 9.2. Last week I ran a statistical analysis program that I wrote in R for two days continuously. The program does repeated intensive computations on a large data set. The program completed its task successfully, but during the process I noted that the computer seemed to be running unusually hot. Shortly after the program stopped,

Hi, Any ideas on how to efficiently convert > list(c(1,2,3),c(4,5,6)) to > data.frame(OriginalListIndex=c(1,1,1,2,2,2),Item=c(1,2,3,4,5,6)) Thanks for any hints, Joh

Example run and stack trace: wazor /s/src/stat/R-1.8.0/tests/Examples $ ../../bin/R --no-save < base-Ex.R R : Copyright 2003, The R Development Core Team Version 1.8.0 (2003-10-08) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a

Hello, Banging my head against a wall here ... can anyone light the way to a pattern modification that would make the following TRUE? identical( grep( "^Intensity\\s[^HL]", c("Intensity","Intensity L", "Intensity H", "Intensity Rep1")), as.integer(c(1,4))) Thank you for your time. Sincerely, Joh

Dear all, Can anyone please shed some light onto how to do this? This will give me all "intensity" columsn in my data frame: intensityindeces <- grep("^Intensity",names(dataframe),value=TRUE) This will give me the maximum intensity for the first row: intensityone <- max(dataframe[1,intensityindeces]) What I'm now looking for is how to dfo this for the whole data