similar to: Suggestion: 'method' slot for expand.grid() (incl. diffs)

Hi I have the feeling, that the argument stringsAsFactors has no impact in the function expand.grid: a <- c("PR", "NC", "A2", "BS") b <- c(1, 0.5, 0.25, 0.125, 0.0625, 0.03125) class(expand.grid(css, fscs, stringsAsFactors=FALSE)[[1]]) [1] "factor" class(expand.grid(css, fscs, stringsAsFactors=TRUE)[[1]]) [1] "factor" Also, when

Dear R-devel, Last week I got several responses to my question about debugging segfaults in my code (original post below). After I changed the S_alloc() calls to Calloc()/Free(), the symptom was gone, but I was told to keep looking. So I did: o Switched to Calloc/Free. Electric Fence did not find any problem. o Put assert(index < bound); assert(index >=0); everywhere in the C routine

(Sorry for the cross-post--- I wasn't sure which list is more appropriate...) Hi everyone, I've run into segfaults when using my randomForest package on large dataset (e.g., 100 x 15200) and large number of trees (e.g., ntree=7000 and mtry=3000). I'm wondering if anyone can give me some hints on where to look for the problem. The randomForest package mainly consists of two things:

(Sorry for the cross-post--- I wasn't sure which list is more appropriate...) Hi everyone, I've run into segfaults when using my randomForest package on large dataset (e.g., 100 x 15200) and large number of trees (e.g., ntree=7000 and mtry=3000). I'm wondering if anyone can give me some hints on where to look for the problem. The randomForest package mainly consists of two things:

Commit-ID: 9b625887a59c03c244b43550b576529f209dde11 Gitweb: http://git.kernel.org/?p=libs/klibc/klibc.git;a=commit;h=9b625887a59c03c244b43550b576529f209dde11 Author: H. Peter Anvin <hpa at linux.intel.com> AuthorDate: Tue, 5 Jan 2016 16:43:50 -0800 Committer: H. Peter Anvin <hpa at linux.intel.com> CommitDate: Tue, 5 Jan 2016 16:43:50 -0800 [klibc] i386: remove special

Hi all, Thanks to Prof. Ripley, Prof. Gentleman, and Simon Wood (did I miss anyone?). The problem seemed to have gone away. Everyone suggested using some malloc debugger (such as Electric Fence). All I did was following half of what BDR suggested below, i.e., changing all the S_alloc() calls to Calloc() and Free(). I didn't get to try efence, and the problem seems to have disappeared! As

Commit-ID: cf8147c43a60d9eb6a6713d16f30364a698a6936 Gitweb: http://git.kernel.org/?p=libs/klibc/klibc.git;a=commit;h=cf8147c43a60d9eb6a6713d16f30364a698a6936 Author: H. Peter Anvin <hpa at linux.intel.com> AuthorDate: Tue, 5 Jan 2016 18:31:40 -0800 Committer: H. Peter Anvin <hpa at linux.intel.com> CommitDate: Tue, 5 Jan 2016 18:35:16 -0800 [klibc] Add accept4(), handle

Hello R users, I have numerical data sampled on two grids, each one shifted by 0.5 from the other. For example: grid1 = expand.grid(x=0:3, y=0.5:2.5) grid2 = expand.grid(x=0.5:2.5, y=0:3) gridFinal = expand.grid(x=0.5:2.5, y=0.5:2.5) plot(gridFinal, xlim=c(0,3), ylim=c(0,3), col="black", pch=19) points(grid1, xlim=c(0,3), ylim=c(0,3), col="red", pch=19) points(grid2,

Dear all, I would like to estimate rainfall with the krige function. First, I produce a polygon of my region of interest (where poly_test.txt is a x,y suite of points defining a polygon, obtained with the grass v.out.ascii command) : user>border_limite<-read.table("/home/lionel/rwork/poly_test.txt",header=FALSE) user>polygone<-list(x=border_limite[,1],y=border_limite[,2])

Hello! I was wondering if it's possible to see the actual code of checkTmvArgs function that is part of the code for rtmvnorm (which is below - I just typed "rtmvnorm" on the prompt). I get an error: Error in checkTmvArgs(mean, sigma, lower, upper) : sigma must be a symmetric matrix At the same time I am pretty sure that the matrix I am passing as sigma is a var-covar matrix

Tried to post this last night, but it doesn't seem to have appeared. Using R 2.0.1 on Windows XP + SP2. I am traveling, away from my usual references. I'm trying to make a 4-dimensional plot: a levelplot with overlaid contours, with different response variables represented by (1) colors on the levelplot and (2) the contour lines. First try was filled.contour + contour but the key

Hello, This is what I am trying to do: I wrote a little function that takes addresses (coordinates) as input, and returns the road distance between every two points using Google Maps. Catch is, there are 2000 addresses, so I have to get around 2x10^6 addresses. On my first go, this is what I did: ######################################### getRoadDist = function(X,complete=F){ # X must be a

> both "_ "and "<-" are assignment operators well, I've changed it in my script, but the result is the same. > what do you get if you call > > in.polygon(grid2.point$x,grid2.point$y,polygon$x,polygon$y) That's it ! In fact all my points in grid2.point where xy inverted. And I had no points in polygon. It was really a stupid mistake. Thanks for all !

Hi, I want to implement a '[' for an S4 class, that behaves differently when called with a single index argument or multiple indexes (possibly missing), like what happens when subsetting matrices x[i] vs. x[i, ]. I manage to do it using nargs() and checking if drop is missing (see code below), but when I want to add an extra argument to the method (before drop), then the parent call

Dear Tony, thanks for the tip with "nargs", when suitably applied, this answers the problem. The behaviour of "nargs" in S4 methods has some subtleties compared to that in normal functions, as shown in the example below. I admit that this is what had earlier created some confusion about the semantics of "nargs". From the perspective of "nargs" and its

Hello, JIT compiler interferes with internal R completions: compiler::enableJIT(2) utils:::functionArgs("density", '') gives: utils:::functionArgs("density", '') Note: no visible global function definition for 'bw.nrd0' Note: no visible global function definition for 'bw.nrd' Note: no visible global function definition for 'bw.ucv'

I initially sent this to the biocore mailing list - but it was suggested that r-devel would also find it interesting. Many of us use a macro like #define CALL_DEF(fname, nargs) { #fname, (DL_FUNC)&fname, nargs} for use in function registration for use with .Call. For example, using the example from R Extension manual, if we want to register a C function myCall with three arguments, we

The survival package, like many others, has several helper functions that are not declared in the namespace, since their only use is to be called by other "main" functions of the package.? This works well since the functions in the survival namespace can see them --- without ::: arguments --- and others don't. Until a situation I ran into this week, for which I solicit comments

Hi there, I'm having a bit of a problem while trying to create BitCast instructions. Well, first, I have some very generic functions written in C, for which I would like to make calls on another C file I'm playing with using an LLVM Pass. The simplified signature of two of these functions can be seen below: void write(void* data, unsigned b); // write b bytes starting, at address

In R's sprintf() if any of the arguments has length 0 the function aborts. E.g., > sprintf("%d", integer(0)) Error in sprintf("%d", integer(0)) : zero-length argument > sprintf(character(), integer(0)) Error in sprintf(character(), integer(0)) : 'fmt' is not a non-empty character vector This comes up in code like x[nchar(x)==0] <-