similar to: libary survival

Hi I would really appreciate some help with my code for coxme... My data set I'm interested in survival of animals after an experiment with 4 treatments, which was performed on males and females. I also have two random factors: Response variable: survival (death) Factor 1: treatment (4 levels) Factor 2: sex (male / female) Random effects 1: person nested within day (2 people did

Hello, today I try to compile a test-file from the Documentation. I link the libarys correct but have only one error in this line: state = speex_encoder_init(&speex_nb_mode); The error: main.cpp|21|undefined reference to `speex_nb_mode'| The linking libarys: "libspeex.lib" "libspeexdsp.lib" I ask in more c++ boards, but nobody can help me. Hopefully I ask the

today I try to compile a test-file from the Documentation. I link the libarys correct but have only one error in this line: state = speex_encoder_init(&speex_nb_mode); The error: main.cpp|21|undefined reference to `speex_nb_mode'| The linking libarys: "libspeex.lib" "libspeexdsp.lib" I am assuming you are doing this in Windows. You need to change the

Hi there, I have a question on fitting data by coxme. In particular I want to fit a random intercept and random slope cox model. Using the rats dataset as an example, I generated another covariate x2 and want to specify a random slope for x2. Here is my code: x2=matrix(rep(runif(50), 3), 50, 3) x2=as.vector(t(x2)) rats2=cbind(rats, x2) But when I used the coxme function as follows, it gave

Hello everybody I'm having some difficulties to design the decision tree algorithm J48. I am using the following code and when I run it gives me the following message plot(m1) Error in plot.Weka_tree(m1) : Plotting of trees with multi-way splits is currently not implemented. #The code library(RWeka) library(randomForest) library(party) if(require(mlbench, quietly = TRUE) &&

The coxme package has a ranef() method, as does lme4. I'm having trouble getting them to play together, as shown below. (The particular model in the example isn't defensible, but uses a standard data set.) The problem is that most of the time only one of lme4 or coxme will be loaded, so each needs to define the basic ranef function as well as a method for it. But when loaded together

Hi, I am trying to add a page effect using the built in javascripts. The effect im trying to create is when a user clicks a link the current page content slides up, then the new content slides down. This all works great in firefox, but in IE between the slide up and slide down, you see a quick flash of the content, and it really spoils the whole effect. Here is the code im using. This is one

yafan zhao wrote: > Hi All > Thanks for all replies regarding to my GCC problem. > I am trying to do profiling now and need to generate "profile_rt.so" > file. I compiled the runtime library using MAKE and tried on both > Windows and Mac, but the compiling can not be done properly. I got the > following error message: > ------------------------------ > make:

Hi, Zhao You can apply the attachment to LLVM 2.9 Release. It has been tested on FreeBSD/x86. Regards, chenwj -- Wei-Ren Chen (陳韋任) Computer Systems Lab, Institute of Information Science, Academia Sinica, Taiwan (R.O.C.) Tel:886-2-2788-3799 #1667 -------------- next part -------------- diff -ruN llvm-2.9/CMakeLists.txt llvm-2.9.new/CMakeLists.txt --- llvm-2.9/CMakeLists.txt 2011-03-02

Hi Chen Thanks for the attached patch file. I have checked out llvm 2.9. There is only one CMakeLists file in "\llvm-2.9". and no CMakeLists file in folder either "\llvm-2.9\runtime\libprofile" or "\llvm-2.9\runtime". Where did you get it? Yafan 2011/4/26 Nick Lewycky <nlewycky at google.com> > On 24 April 2011 00:57, 陳韋任 <chenwj at

Hi Chen Applied your patch to cmakelists files in LLVM 2.9 release and build llvm using Visual Studio 2008 successfully, but there is still no profile_rt.so. I do have profile_rt of visual studio solution file and project file in folder \llvm-2.9build\runtime\libprofile. I also tried version2.9 form SVN and it has all necessary cmakelists files now, but I still have same problem (no

On 24 April 2011 00:57, 陳韋任 <chenwj at iis.sinica.edu.tw> wrote: > Hi, Zhao > > You can apply the attachment to LLVM 2.9 Release. It has been tested > on FreeBSD/x86. > Hi Chen, may I commit this (updated to include GCDAProfiling.cpp) to LLVM SVN? Nick > > Regards, > chenwj > > -- > Wei-Ren Chen (陳韋任) > Computer Systems Lab, Institute of Information

Hi, Zhao > I have checked out llvm 2.9. There is only one CMakeLists file in Release or svn? I believe Nick has committed those CMake files into svn. You can apply my patch to LVM 2.9 Release. > "\llvm-2.9". and no CMakeLists file in folder either > "\llvm-2.9\runtime\libprofile" or "\llvm-2.9\runtime". Where did you get it? As Nick said, libprofile

Hi All Thanks for all replies regarding to my GCC problem. I am trying to do profiling now and need to generate "profile_rt.so" file. I compiled the runtime library using MAKE and tried on both Windows and Mac, but the compiling can not be done properly. I got the following error message: ------------------------------ make: Entering directory `C:/llvm/runtime'

I can't comment on frailtypack issues, but would like to mention that coxme will handle nested models, contrary to the statement below that "frailtypack is perhaps the only .... for nested survival data". To reprise the original post's model cgd.nfm <- coxme(Surv(Tstart, Tstop, Status) ~ Treatment + (1 | Center/ID), data=cgd.ag) And a note to the poster-- you should

Hi Nick Thanks for you reply. CMAKE is very new to me. I complied using GNU WIN32 and got those errors. Is it possible to compile it using GNU WIN 32 and anything need to be modified? I managed to compile the run time library on a mac machine. Yafan On Fri, Apr 22, 2011 at 5:04 PM, Nick Lewycky <nicholas at mxc.ca> wrote: > yafan zhao wrote: > >> Hi All >> Thanks for

Dear R experts; I am trying to extract the p values from a coxme object (package coxme). I can see the value in the model output, but I wanted to have the result with a higher number of decimal places. I have searched the mailing list and followed equivalent suggestions for nlme/lme objects, but I wasn't successful. Thanks; Catarina [[alternative HTML version deleted]]

Hello, I am running R 2.6.1 on windows xp I am trying to fit a cox proportional hazard model with a shared Gaussian frailty term using coxme My model is specified as: nofit1<-coxme(Surv(Age,cen1new)~ Sex+bo2+bo3,random=~1|isl,data=mydat) With x1-x3 being dummy variables, and isl being the community level variable with 4 levels. Does anyone know if there is a way to get the standard error

Almost all of the coxme package and an increasing amount of the survival package are now written in noweb, i.e., .Rnw files. It would be nice to process these using the Sweave function + a special driver, which I can do using a modified version of Sweave. The primary change is to allow the following type of construction <<coxme>> coxme <- function(formula, data, subset, blah blah

Dear all, I am using "coxme" function in Kinship library to fit random treatment effect nested within centre. I got 3 treatments (0,1,2) and 3 centres. I used following commands, but got an error. > ugroup=paste(rep(1:3,each=3),rep(0:2,3),sep='/') > mat1=bdsmatrix(rep(c(1,1,1,1,1,1,1,1,1),3),blocksize=rep(3,3),dimnames=list(ugroup,ugroup)) >